| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,350,682:1 | +A | 6.9% | noncoding (106/121 nt) | arcZ → | small regulatory RNA ArcZ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,350,682 | 1 | . | A | 6.9% | 274.0 / 15.3 | 72 | noncoding (106/121 nt) | arcZ | small regulatory RNA ArcZ |
| Reads supporting (aligned to +/- strand): ref base . (32/35); new base A (3/2); total (35/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.70e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.34e-01 | |||||||||||
AACAAATCATTTAAGTTTTGCTATCTTAACTGCGTGCGGCCTGAAAAACAGTGCTGTGCCCTTGTAACTCATCATAATAATTTACGGCGCAGCCAAGATTTCCCTGGTGTTGGCGCAGTATTCGCGCACCCCGGTCTAG‑CCGGGGTCATTTTTTAGTGGCTTTTGCCACCCACGCTTTCAGCACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCAGGAGACTGAATTTGCTGACCC > NC_000913/3350544‑3350824 | aaCAAATCATTTAAGTTTTGCTATCTTAACTGCGTGCGGCCTGAAAAACAGTGCTGTGCCCTTGTAACTCATCATAATAATTTACGGCGCAGCCACGATTTCTCTCGTGTTGGCGCAGTATTCGCGCACCCCGGTCTAC‑CCgg > 2:686901/1‑143 (MQ=255)aaCAAATCATTTAAGTTTTGCTATCTTAACTGCGTGCGGCCTGAAAAACACTGCTTTGCCCTTGTAACTCATCATAATAATTTACGGCGCAGCCACGATTTCCCTGGTGTTGCCGCCGTATTCGCGCACCCCGGTCTAG‑CCgg > 2:911535/1‑143 (MQ=255) aCAATTCATTTAAGTTTTGCTATCTTAACGGCGTGCGGCCTGAAAAACAGTGCTGTGCCCTTGTAACTCATCATAATAATTTACGGCGCAGCCAAGATTTCCCTGGTGTTGGCGCAGTATTCGCGCACCCCGGTCTAG‑CCggg < 2:857868/143‑1 (MQ=255) aCAAATCATTTAAGTTTTGCTATCTTAACTGCGTGCGGCCTGAAAAACAGTGCTGTGCCCTTGTAACTCATCATAATAATTTACGGCGCAGCCAAGATTTCCCTGGTGTTGGCGCAGTATTCGCGCACCCCGGTCTAG‑CCggg > 1:969016/1‑143 (MQ=255) aCAAATCATTTAAGTTTTGCTATCTTAACTGCGTGCGGCCTGAAAAACAGTGCTGTGCCCTTGTAACTCATCATAATAATTTACGGCGCAGCCAAGATTTCCCTGGTGTTGGCGCAGTATTCGCGCACCCCGGTCTAG‑CCggg > 1:904269/1‑143 (MQ=255) aaaTCATTTAAGTTTTGCTATCTTAACTGCGTGCGGCCTGAAAAACAGTGCTGTGCCCTTGTAACTCATCATAATAATTTACGGCGCAGCCAAGATTTCCCTGGTGTTGGCGCAGTATTCGCGCACCCCGGTCTAG‑CCGGGGt > 2:606693/1‑143 (MQ=255) aaaTCATTTAAGTTTTGCTATCTTAACTGCGTGCGGCCTGAAAAACAGTGCGGTGCCCGTGTAACTCATCATAATAATTTACGGCGCAGCGAAGATTTCCCTGGTGTTGGCGCAGTATTCGCGCACCCCGGTCTAG‑CCGGGGt > 1:487219/1‑143 (MQ=255) cATTTAAGTTTTGCTATCTTAACTGCGTGCGGCCTGAAAAACAGTGCTGTGCCCTTGTAACTCATCATAATAATTTACGGCGCAGCCAAGATTTCCCTGGTGTTGGCGCAGTATTCGCGCACCCCGGTCTAG‑CCGGGGTCAtt < 2:664676/143‑1 (MQ=255) cATCTAAGTTTTGCTATCTTGACAGCGTTCGGCCTGAAAAACAGCGCTGTGCCCTTGTAACTCATCATAATAATTTACTGCGCAGCCAAGATTTCCCTGGTGTTGGCGCAGTATTCGCGCACCCCGG‑CTAGACCGGGGtgcgc < 1:1200434/143‑5 (MQ=255) ttAAGTTTTGCTATCTTAACTGCGTGCGGCCTGAAAAACAGTGCTGTGCCCTTGTAACTCATCATAATAATTTACGGCGCAGCCAAGATTTCCCTGGTGTTGGCGCAGTATTCGCGCACCCCGGTCTAG‑CCGGGGTCAttttt < 1:701381/143‑1 (MQ=255) ttAAGTTTTGCTATCTTAACTGCGTGCGGCCTGAAAAACAGTGCTGTGCCCTTGTAACTCATCATAATAATTTACGGCGCAGCCAAGATTTCCCTGGTGTTGGCGCAGTATTCGCGCACCCCGG‑CTAGACCGGGGtgcgcgaa < 1:163094/143‑8 (MQ=255) aaGTTTTGCTATCTTAACTGCGTGCGGCCTGAAAAACAGTGCTGTGCCCATGTAACTGATCATAATAATTTACGGCGCAGCCAAGATTTCCCTGGTGTTGGCGCAGTATTCGCGCACCCCGGTCTAG‑CCGGGGTCAGTTTGTa > 1:1003127/1‑143 (MQ=255) aaGTTTTGCTATCCTAGCTGCGTGCGGCCTGAAAAACAGTGCTGTGCCCTTGTAACTCATCATAATAATTTACGGCGCAGCCAAGATTTCCCTGGTGTGGGCGCAGTATTCGCGCACCCCGGTCTAG‑CCGGGGTCATTTTTTa < 1:892289/143‑1 (MQ=255) aaGGTTTGCTATCTTAACTGCGTGCGGCCTGAAAAACAGTGCTGTGCCCTTGTAACTCATCATAATAATTTACGGCGCAGCCAAGATTTCCCTGGTGTTGGCGCAGTATTCGCGCACCCCGGTCTAG‑CCGGGGTCATTTTTTa < 2:337370/143‑1 (MQ=255) aGTTTTGCTATCTTAACTGCGTGCGGCCTGAAAAACAGTGCTGTGCCCTTGTAACTCATCATAATAATTTACGGCGCAGCCAAGATTTCCCTGGTGTTGGCGCAGTATTCGCGCACCCCGGTCTAG‑CCGGGGTCATTTTTTAg < 2:799523/143‑1 (MQ=255) tATCTTAACTGCGTGCGGCCTGAAAAACAGTGCTGTGCCCTTGTAACTCATCATAATAATTTACGGCGCAGCCAAGATTTCCCTGGTGTTTGCGCAGTATTCGCGCACCCCGGTCTAG‑CCGGGGGCATTTTTTAGTGGCtttt > 1:260549/1‑143 (MQ=255) aTCTTAACTGCGTGCGGCCTGAAAAACAGTGCTGTGCCCTTGTAACTCATCATAATAATTTACGGCGCAGCCAAGATTTCCCTGGTGTTGGCGCAGTATTCGCGCACCCCGGTCTAG‑CCGGGGTCATTTTTTAGTGGCTTTTg < 1:916250/143‑1 (MQ=255) ttAACTGCGTGCGGCCTGAAAAACAGTGCTGTGCCCTTGTAACTCATCATAATAATTTACGGCGCAGCCAAGATTTCCCTGGTGTTGGCGCAGTATTCGCGCACCCCGGTCTAG‑CCGGGGTCATTTTTTAGTGGCTTTTGcca > 2:919049/1‑143 (MQ=255) aCTGCGTGCGGCCTGAAAAACAGTGCTGTGCCCTTGTAACTCATCATAATAATTTACGGCGCAGCCAAGATTTCCCTGGTGTTGGCGCAGTATTCGCGCACCCCGGTCTAG‑CCGGGGTCATTTTTTAGTGGCTTTTGccaccc > 2:1021120/1‑143 (MQ=255) cgtgcgGCCTGAAAAACAGTGCTGTGCCCTTGTAACTCATCATAATAATTTACGGCGCAGCCAAGATTTCCCTGGTGTTGGCGCAGTATTCGCGCACCCCGGTCTAG‑CCGGGGTCATTTTTTAGTGGCTTTTGccacccacac < 1:606693/143‑3 (MQ=255) gtgcgGCCTGAAAAACAGTGCTGTGCCCTTGTAACTCATCATAATAATTTACGGCGCAGCCAAGATTTCCCTGGTGTTGGCGCAGTATTCGCGCACCCCGGTCTAG‑CCGGGGTCATTTTTTAGTGGCTTTTGCCACCCACGCt > 1:862133/1‑143 (MQ=255) tgcgGCCTGAAAAACAGTGCTGTGCCCTTGTAACTCATCATAATAATTTACGGCGCAGCCAAGATTTCCCTAGTGTTGGCGCAGTATTCGAGCACCCCAGTCTAG‑CCGGGGTCATTTTTTAGTGGCTTTTGCCACCCACGCtt > 1:49472/1‑143 (MQ=255) cgGCCTGAAAAACAGTGCTTTGCCCTTGTAACTCATCATAATAATTTACGGCGCAGCCAAGATTTCCCTGGTGTTGGCGCAGTATTCGCGCACCCCGGTCTAG‑CCGGGGTCATTTTTTAGTGGCTTTTGCCACCCACGCTTTc < 2:977163/143‑1 (MQ=255) cgGCCTGAAAAACAGTGCTGTGCCCTTGTAACTCATCATAATAATCTACGGCGCAGCCAAGCTTTCCCTTGTGTCTGCGGGGTTTTCGCCCACCCCGGTCTAG‑CCGGGGTCATTTTTTAGTGGCTTTTGCCACCCACGCTTTc < 2:1246931/143‑1 (MQ=255) ggCCTGAAAAACAGTGCTGTGCCCTTGTAACTCATCATAATAATTTACGGCGCAGCCAAGATTTCCCTGGTGTTGGCGCAGTATTCGCGCACCCCGGTCTAG‑CCGGGGTCATTTTTTAGTGGCTTTTGCCACCCACGCTTTCa < 2:231177/143‑1 (MQ=255) gCCTGAAAAACAGTGCTGTGCCCTTGTAACTCATCATAAAACTTTAAATGGCGTCCAAGATTTCCCTGGTTGTGGCGCAGTATTCGCGCACCCCGGTCTAG‑CCGGGGTCATTTTTTAGTGGCTTTTGCCACCCACGCTTTCAg < 1:872738/143‑1 (MQ=255) gtGAACAACAGGGCTGTGCCCTTGTAACTCATGATGAGGATTGACGGCGCAGGCAGGCTTTCCCTGGGGTTGGCGCAGTATGCGCGCACCCCGGTCTAG‑CCGGGGTCATTTTTTAGTGGCTTTTGCCACCCACGCTTTCAGCa < 2:1096030/142‑1 (MQ=255) aaaaaCAGTGCTGTGCCCTTGTAACTCATCATAATAATTTACGGCGCAGCCAAGATTTCCCTGGTGTTGGCGCAGTATTCGCGCACCCCGGTCTAG‑CCGGGGTCATTTTTTCGTGGCTTGTGCCACCCACGCTCTCAGCACtt > 2:650159/1‑143 (MQ=255) aaaCAGTGCTGTGCCCTTGTAACTCATCATAATAATTTACGGCGCAGCCAAGATTTCCCTGGTGTTGGCGCAGTATTCGCGCACCCCGGTCTAG‑CCGGGGTCATCTTTTAGTGGCGTTTGCCACCCACGCTCTCAGCACTTCt > 2:1130481/1‑143 (MQ=255) aaaCAGTGCTGTGCCCTTGTAACTCATCATAATAATTTACGGCGCAGCCAAGATTTCCCTGGTGTTGGCGCAGTATTCGCGCACCCCGGTCTAG‑CCGGGGGCATCTTTTAGTGGCTTTTGCCACCCACGCTTTCAGCACTTCt > 2:474258/1‑143 (MQ=255) gaCAGTGCTGTGCCCTTGTAACTCATCATAATAATTTACGGCGCAGCCAAGATTTCCCTGGTGTTGACGCAGTATTCGCACACCCCGGTCTAG‑CCGGGGTCATTTTTTAGTGGCTTTTGCCACCCACGCTTTCAGCACTTCTa < 2:1087289/142‑1 (MQ=255) aaCAGTGCTGTGCCCTTGTAACTCATCATAATAATTTACGGCGCAGCCAAGATTTCCCTGGTGTTGGCGCAGTATTCGCGCACCCCGGTCTAG‑CCGGGGTCATTTTTTAGTGGCTTTTGCCACCCACGCTTTCAGCACTTCTa > 1:1054143/1‑143 (MQ=255) aCAGTGCTGTGCCCTTGTAACTCATCATAATAATTTACGGCGCAGCCAAGATTTCCCTGGTGTTGGCGCAGTATTCGCGCACCCCGGTCTAG‑CCGAGGACATTTTTTAGTGGCTTTTGCCACCCACGCTTTCAGCACTTCTAc > 1:930507/1‑143 (MQ=255) aGTGCTGTGCCCTTGTATCTCATCATAATAATTTACGGCGCAGCCAAGATTTCCCTGGTGTTGGCGCAGTATGCGCGCGCCCCGGTCTAG‑GCGGGGTCATTTTTTAGTGGCTTTTGCCACCCACGCTTTCAGCACTTCTAcgt < 2:161668/143‑1 (MQ=255) aGTGCTGTGCCCTTGTAACTCATCATAATAATTTACGGCGCAGCCAAGATTTCCCTGGTGTTGGCGCAGTATTCTCGCACCCCGGTCTAG‑CCGGGGTCATTTTTTAGTGGCTTTTGCCACCCACGCTTTCAGCACTTCTAcgt > 1:672705/1‑143 (MQ=255) aGTGCTGTGCCCTTGTAACTCATCATAATAATTTACGGCGCAGCCAAGATTTCCCTGGTGTTGGCGCAGTATTCGCGGACCCGGGTCTAG‑CCGGGTCCACTTTTTAGTGGCTTTTGCCCCCCACGCTTTCAGGACGTCTAcgt > 1:47720/1‑143 (MQ=255) gTGCTGTGCCCTTGTAACTCATCATAATAATTTACGGCGCAGCCAAGATTTCCCTGGTGTTGGCGCAGTATTCGCGCACCCCGGTCTAG‑CCGGGGTCATTTTTTAGTGGCTTTTGCCACCCACGCTTTCAGCACTTCTAcgtc < 1:115715/143‑1 (MQ=255) tgtgCCCTTGTAACTCATCATAATAATTTACGGCGCAGCCAAGATTTCCCTGGTGTTGGCGCCGTATTCGCGCACCCCGGTCTAG‑CCGGGGTCATTTTTTAGTGGCTTTTGCCACCCACGCTTTCAGCACTTCTACGTCTTgc > 1:12501/1‑142 (MQ=255) gCCCTTGTAACTCATCATAATAATTTACGGCGCAGCCAAGATTTCCCTGGTGTTGGCGCAGTATTCGCGCACCCCGGTCTAG‑CCGGGGTCATTTTTTAGTGGCTTTTGCCACCCACGCTTTCAGCACTTCTACGTCGTGACGc < 1:919049/143‑1 (MQ=255) ttGTAACTCATCATAATAATTTACGGCGCAGCCAAGATTTCCCTGGTGTTGGCGCAGTATTCGCGCACCCCGGTCTAG‑CCGGGGTCATTTTTTAGTGGCTTTTGCCACCCACGCTTTCAGCACTTCTACGTCGTGACGCCAct < 2:862133/143‑1 (MQ=255) tGTAACTCATCATAATAATTTACGGCGCAGCCAAGATTTCCCTGGTGTTGGCGCAGTATTCGCGCACCCCGGTCTAG‑CCGGGGTCATTTTTTAGTGGCTTTTGCCACCCACGCTTTCAGCACTTCTACGTCGTGACGCCActc < 2:1103886/143‑1 (MQ=255) tGTAACTCAGCATAATAATTTGCGGCGCGGCCAAGATTTCGCTGGTGTTTGCGCAGTATTCGCGCACCCCGGTCTAG‑CCGGGGTCATTTTTTAGTGGCTTTTGCCACCCACGCTTTCAGCACTTCTACGTCGTGACGCCActc < 2:314576/143‑1 (MQ=255) aaCTCATCATAATAATTTACGGCGCAGCCAAGATTTCCCTGGTGTTGGCGCAGTATTCGCGCACCCCGGTCTAG‑CCGGGGTCATTTTTTAGTGGCTTTTGCCACCCACGCTTTAAGCACTTCTACGTCGTGACGCCACtcttg > 1:593103/1‑142 (MQ=255) cTCATCATAATAATTTACGGCGCAGCTAAGATTTCCCTGGTGTTGGCGCAGTATTCGCGCACCCCGGTCTAG‑CCGGGGGCATTTTTTAGTGGCTTTTGCCACCCACGCTTTCAGCACTTCTACGTCGTGACGCCACTcttctt < 2:734082/143‑1 (MQ=255) cctaatagTGTGCGGCGCAGCCAAGGTGTCGCTGGGGTGGGCGCAGCATTCGCGTCCCCCGGTCTAG‑CCGGGGGCAGTTTCTAGTGGCTTGCGCCACCCGCGCGTTCAGCACTTCTACGTCGTGACGCCACTCTTCTTTCAtc < 1:239636/141‑1 (MQ=255) gtACGGCGGAGCCAAGATTTCCCTCGTTTTTGCGCAGTATTCGCGCACCCCGGTCTAG‑CCGGGGTCATTTTTTAGTGGCTTTTGCCACCCACGCTTTCAGCACTTCTATGTCGTGACGCCACTCTTCTTTCATCTCTTCAATc < 2:745888/142‑1 (MQ=255) cGGCGCAGCCAAGATTTCCCTGGTGTTGGCGCAGTATTCGCGCACCCCGGTCTAG‑CCGGGGGCATTTTTTACTGGCTCTCGCCACCCACGCTTTCCGCACTTCTACGTCCTGACGCCACTCTTCCTCCATTCCTTCAACCCAt > 2:967502/1‑143 (MQ=255) gcgcAGCCAAGATTTCCCTGGTGTTGGCGCAGTATTCGCGCACCCCGGTCTAG‑CCGGGGTCATTTTTTACTGGCTTTTGCCACCCACGCTCTCAGCACTTCTACGTCGCGACGCCACTCTCCTCTCACCTCTTTCATcccctc > 2:3325/1‑139 (MQ=255) cgcAGCCAAGATTTCCCTGGTGTTGGCGCAGTATTCGCGCACCCCGGTCTAG‑CCGGGGTCATTTTTTAGTGGCTTCTGCCACCCACGCTTTCAGCACTTCTACGTCGTGACGCCACTCTTCTTTCAACTCTTCAATCCaacca > 2:323187/1‑139 (MQ=255) gtcAAGAGTTCCCTGGTGTTGGCGCAGTATTCGCGCACCCCGGTCTAG‑CCGGGGTCATTTTTTAGTGGCTTTTGCCACCCACGCTTTCAGCACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGa < 2:433882/141‑1 (MQ=255) gCCAAGATTTCCCTGGTGTTGGCGCAGTATTCGCGCACCCCGGTCTAG‑CCGGGGTCATTGTTTAGTGGCTTTGGCCGCCCACGCTTTCAGCACTTCTACGTCGTGACGCCACTCTTCTTGCATCTCTTCAATCCATTCACCGa > 2:1039272/1‑143 (MQ=255) ccAAGCTTCCCCTGGTGTTGGCGCAGTATTCGCGCACCCCGGTCTAG‑CCGGGGTCATTTTTTAGTGGCTTTTGCCACCCACGCTTTCAGCACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGAc < 1:917620/143‑1 (MQ=255) cAAGATTTCCCTGGTGTTGGCGCAGTATTCGCGCACCCCGGTCTAG‑CCGGGGTCATTTTTTAGTGGCTTTTGCCACCCACGCTTTCAGCCCTTCTACGTCGTGACGCCACTCTTCTTTCACCTCTCTCATCGACTGACCGACg > 1:719169/1‑143 (MQ=255) aaGATTTCCCTGGTGTTGGCGCAGTATTCGCGCACCCCGGTCTAG‑CCGGGGTCATCTCTTAGTGGCTTTTGCCACCCACGCTTTCAGCACTTCTACGTCGTGACGCCACTCTTCTTTCATCCCTTCAAGCCACTCACCGACGt > 2:151979/1‑143 (MQ=255) aGATTTCCCTGGTGTTGGCGCAGTATTCGCGCACCCCGGTCTAG‑CCGGGGTCATTTTTTAGTGGCTTTTGCCACCCACGCTTTCAGCACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGtt < 1:1021120/143‑1 (MQ=255) tttCCCTGGTGTTGGCGCAGTATTCGCGCACCCCGGTCTAG‑CCGGGGTCATTTTTTAGTGGCTTTTGCCACCCACGCTTTCAGCACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATc > 1:55187/1‑143 (MQ=255) ccTGGTGTTGGGGCAGTATTCGCGCACCCCGGTCTAG‑CCGGGGTCATTTTTCATCCCCTTTTGCCACCCACGCTTTCAGCACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTcc < 1:238775/143‑1 (MQ=255) gtTGGCGCAGTATTCGCGCACCCCGGTCTAG‑CCGGGGTCATTTTTTAGTGGCTTTTGCCACCCACGCTTTCAGCACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGcc < 1:1011922/143‑1 (MQ=255) ttGGCGCAGTATTCGCGCACCCCGGTCTAG‑CCGGGGTCATTTTTTAGTGGCTTTTGCCACCCACGCTTTCAGCACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCCg < 2:380639/143‑1 (MQ=255) gcAGTATTCGCGCACCCCGGTCTAG‑CCGGGGTCATTTTTTAGTGGCTTTTGCCACCCACGCTTTCAGCACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGCCGTTCTCTTGCCCGGCCGGACgg > 2:1166853/1‑143 (MQ=255) ggaTTCGCGCACCCCGGTCTAG‑CCGGGGTCATTTTTTAGTGGCTTTTGCCACCCACGCTTTCAGCACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCa < 1:444470/141‑1 (MQ=255) aTTCGCGCACCCCGGTCTAG‑CCGGGGTCATTTTTTAGTGGCTTTTGCCACCCACGCTTTCAGCACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCAgg < 1:764078/143‑1 (MQ=255) aaaatgaCCCCGG‑CTAGACCGGGGTCATTTTTTAGTGGCTTTTGCCACCCACGCTTTCAGCACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTcagcag > 2:985109/7‑143 (MQ=255) cgcgCACCCCGGTCTAG‑CCGGGGTCATTTTTTAGTGGCTTTTGCCACCCACGCTTTCAGCACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCCCCGACGTTATCTTCCCAGGCCGGAAGGTCAGgaga < 1:1034326/143‑1 (MQ=255) cgcACCCCGGTCTAC‑CCAGGGAGATGTTTGAGTGGCTTTTGCCGCCCACGCTTGCAGCACTCCTACGTCTGGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCAGGAGACt < 1:228745/143‑1 (MQ=255) atgaCCCCGG‑CTAGACCGGGGTCATTTTTTAGTGGCTTTTGCCCCCCACGCCTTCAGCCCTTCTACGTCGTGACGCCACTCTCCTTTCATCTCTTCACTCCATCCACCGACGTCACCCTCCCAGCCCCGCAGGCCACGacacc > 2:223871/4‑142 (MQ=255) atgaCCCCGG‑CTAGACCGGGGTCATTTTTTAGTGGCTTTTGCCACCCACGCTTTCAGCACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATGTTCCCAGGCCGGAAGGGCCGGAGACt > 2:929813/4‑143 (MQ=255) gcACCCCGGTCTAG‑CCGGGGTCATTTTTTAGTGGCTTTTGCCACCCACGCTTTCAGCACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCAGGAGACTg > 1:428845/1‑143 (MQ=255) cACCCCGGTCTAG‑CCGGGGTCATTTTTTAGTGGCTTTTGCCACCCACGCTTTCAGCACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCAGGAGACTGa > 2:1191232/1‑143 (MQ=255) cccGGTCTAG‑CCGGGGTCATTTTTTAGTGGCTTTTGCCACCCACGCTTTCAGCACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCAGGGCCCTGAAtt > 2:1151409/1‑143 (MQ=255) gTCTAG‑CCGGGGTCATTTTTTAGTGGCTTTTGCCACCCACGCTTTCAGCACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCAGGAGACTGAATTTGCt < 2:518281/143‑1 (MQ=255) cgaG‑CCGGGGTCATTTTTTAGTGGCTGTTGCCACCCACGCTTTCAGCACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCAGGAGACTGAATTTGCTGa < 2:346877/141‑1 (MQ=255) g‑CCGGGGTCATTTTTTAGTGGCTTTTGCCACCCACGCTTTCAGCACTTCTACGTCGTGACGCCACTCTTCTTTCACCTCTTCACTCCATTCACCGACGTTATCTTCCCCGGCCGGAAGGCCAGGCGCCTGACTTTGCTGGccc > 1:29849/1‑143 (MQ=255) | AACAAATCATTTAAGTTTTGCTATCTTAACTGCGTGCGGCCTGAAAAACAGTGCTGTGCCCTTGTAACTCATCATAATAATTTACGGCGCAGCCAAGATTTCCCTGGTGTTGGCGCAGTATTCGCGCACCCCGGTCTAG‑CCGGGGTCATTTTTTAGTGGCTTTTGCCACCCACGCTTTCAGCACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCAGGAGACTGAATTTGCTGACCC > NC_000913/3350544‑3350824 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |