New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3098507 =NA (NA)3 (0.050) 3/248 NT NA noncoding (3/30 nt) other REPt217c
?NC_000913 3098531 = NA (NA)noncoding (27/30 nt) other REPt217c

TTTTTAAATTCGCTGCTGGAGCTTTTTCTGGCTGAGTAAACTTGTATTGCCGGATGCGGCGTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCAACGCCGCATCCTGCTACAAATCGTGCACTATATCAAACTTACTTAATCACCCCATTGCGCCGCAGTTGTTCGGTATCTTTTTTCCAGCGTTCATTAGCTTGGTTGATATCGTCAATTTTCATCAA  >  NC_000913/3098365‑3098644
                                                                                                                                              |                                                                                                                                         
agaaataaacagtaaaaaagtcgcgattttgatgaaaattgacgatatcaaccgtgcgcggaaacgcgagaaaaaagataccgaacaactgcggcgcaatggggtgattaagtaagtttgatatagtgcacgatttgtagcag                                                                                                                                           >  1:292542‑M1/143‑143 (MQ=255)
 ttttAAATTCGCTGCTGGAGCTTTTTCTGGCTGAGTAAACTTGTATTGCCGGATGCGGCGTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCgg                                                                                                                                          >  1:1048037/1‑143 (MQ=255)
 ttttAAATTCGCTGCTGGAGCTTTTTCTGGCTGAGTAAACTTGTATTGCCGGATGCGGCGTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGCCTGATACGACGCGCAAGCGTCGCATCCGACGCTGATTGCCgg                                                                                                                                          >  2:719867/1‑143 (MQ=255)
  aaataaacagtaaaaaagtcgcgattttgatgaaaattgacgatatcaaccaagctaatgaacgctggaaaaaagataccgaacaactgcggcgcaatggggtgattaagtaagtttgatatagtgcacgatttgtagcaGGa                                                                                                                                         <  1:776011‑M1/3‑1 (MQ=255)
    tAAATTCGCTGCTGGAGCTTTTTCTGGCTGAGTAAACTTGTATTGCCGGATGCGGCGTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATg                                                                                                                                       <  2:144202/143‑1 (MQ=255)
       aaacagtaaaaagtcgcgattttgatgaaaattgacgatatcaaccaagctaatgaacgctggaaaaaagataccgaacaactgcggcgcaatggggtgattaagtaagtttgatatagtgcacgatttgtagcaGGATGCgg                                                                                                                                    <  1:433144‑M1/8‑1 (MQ=255)
        ttCGCTGCTGTAGCTTTTTCTGGCTGAGTAACCTTGTATTGCCGGATGCGGCGTGAACGCCTTATCCAGCCGAACCATGGCGTCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCggg                                                                                                                                   <  1:181123/143‑1 (MQ=25)
           gctgctGGAGCTTTTTCTGGCTGAGTAAACTTGTATTGCCGGATGCGGCGTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGGTGCgggggc                                                                                                                                >  1:1070929/1‑141 (MQ=255)
                tgGAGCTTTTTCTGGCTGAGTAAACTTGTATTGCCGGATGCGGCGTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCAAcgc                                                                                                                           <  1:966457/143‑1 (MQ=255)
                  gAGCTTTTTCTGGCTGAGTAAACTTGTATTGCCGGATGCGGCGTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCAAcgccg                                                                                                                         >  1:1028128/1‑143 (MQ=255)
                    gCTTTTTCTGGCTGAGTAAACTTGTATTGCCGGATGCGGCGTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCAACGCCGCa                                                                                                                       >  1:656259/1‑143 (MQ=255)
                      tgtttCTGGCCGCGTTTGCTTGTGTTGCCTGATGCGGCGTGAACGCCTCATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATGAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCGGCGTTGACCCCGCATc                                                                                                                     <  2:895595/141‑1 (MQ=18)
                       tgttCTGGCTGAGTAGACTTGGATTGCCGGATGCGGCGTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCAACGCCGCATcc                                                                                                                    <  2:1019884/141‑1 (MQ=255)
                       gttgcTGGCTGAGTAAACTTGTATTGCCGGATGCGGCGTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCAACGCCGCATcc                                                                                                                    <  2:535290/139‑1 (MQ=255)
                         attttgatgaaaattgacgatatcaaccaagctaatgaacgctggaaaaaagataccgaacaactgcggcgcaatggggtgattaagtaagtttgatatagtgcacgatttgtagccGGATGCGGGGTCAACGCCGCATCCTg                                                                                                                  >  2:179731‑M1/118‑143 (MQ=255)
                          tCTGGCTGAGTAAACTTGTATTGCCGGACGCGGCGTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCAACGCCGCATCCTGc                                                                                                                 <  1:120638/143‑1 (MQ=255)
                             ggttgggTATACTTGTATTGCCGGAGGCGGCGTCACCGCCTTATCCAGCCGACATGTGGCAGCGGTTGTCGGTCTGATAAGACGCGCAAGCGTCGCATCAGGCGTTGTTTGCCGGATGCGGGGTCAACGCCGCATCCTGTTAc                                                                                                              <  2:1116287/137‑1 (MQ=18)
                               cTGAGTAAACTTGTATTGCCGGATGCGGCGTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCAACGCCGCATCCTGCTACaa                                                                                                            >  1:1242695/1‑143 (MQ=255)
                                tGAGTGAACGTGTATTGCCCGATGCGGCGTGCACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGCATTATAAGTTGTGGCGGGCTCCCATCAGACGTTGATTGCCGGATGCGGGGTCAACGCCGCATCCTGCTACaaa                                                                                                           <  2:908722/143‑1 (MQ=255)
                                  aGTAAACTTGTATTGCCGGAAGCGACGTGAACGCCTTATCCAGCCGACATGTGGCAGAGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCAGAAGCGGGGTCAAAGCCGGATACTGCAACAAATc                                                                                                         >  2:90790/1‑143 (MQ=25)
                                    tAAACTTGTGTTGCCGGATGCGGCGTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCAACGCCGCATCCTGCTACAAATCGt                                                                                                       <  1:428784/143‑1 (MQ=255)
                                        cTTGTATTGCCGGATGCGGCGTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCAACGCCGCATCCTGCTACAAATCGTGCAc                                                                                                   <  1:621833/143‑1 (MQ=255)
                                         ttGTATTGCCGGATGCGGCGTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCAACGCCGCATCCTGCTACAAATCGTGCACt                                                                                                  >  2:870128/1‑143 (MQ=255)
                                                 ccGGATGCGGCGTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCAACGCCGCATCCTGCTACAAATCGTGCACTATATCaaa                                                                                          <  2:40048/143‑1 (MQ=255)
                                                 ccGGATGCGGCGTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCAACGCCGCATCCTGCTACAAATCGTGCACTATATCaaa                                                                                          <  1:979653/143‑1 (MQ=255)
                                                 ccGGATGCGGCGTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCAACGCCGCATCCTGCTACAAATCGTGCACTATATCaaa                                                                                          <  1:929384/143‑1 (MQ=255)
                                                    gacgcggcgTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCAACGCCGCATCCTGCTACAAATCGTGCACTATATCAAactt                                                                                       <  2:727151/140‑1 (MQ=255)
                                                      tgacgcgTGAACGCCTTATCCACTCGACATGTGGCAGCCGTTGTAGGTCTGGTGAGACGCGCCAGCGTCGCGTCAGACGTTGATTGCCGGATTTGGGGTCAACGCCGCATCCTGCTACAAATCGTGCACTATATCAAacttac                                                                                     <  2:837503/139‑1 (MQ=255)
                                                         ggcgTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGACAACGCCGCATGCTGCTACAAATCGTGCACTATATCAGActtactta                                                                                  >  1:994475/1‑143 (MQ=255)
                                                          gcgTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCAACGCCGCATCCTGCTACAAATCGTGCACTATATCAAACTTACTTaa                                                                                 >  1:787665/1‑143 (MQ=255)
                                                          gcgTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGACCGGTGGAGGCGGGGTCAACGCCGCATCCTGCTACAAATCGTGCACTATATCAAACTTACTTaa                                                                                 >  1:934409/1‑143 (MQ=38)
                                                            gTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCAACGCCGCATCCTGCTACTAATCGTGCTCTGTATCTAACTAACTTAATc                                                                               >  1:468941/1‑143 (MQ=37)
                                                               caCGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCAACGCCGCATCCTGCTACAAATCGTGCACTATATCAAACTTACTTAATCAcc                                                                            <  1:298659/142‑1 (MQ=255)
                                                                 cGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCAACGCCGCATCCTGCTACAAATCGTGCACTATATCAAACTTACTTAATCAcccc                                                                          <  2:650984/143‑1 (MQ=255)
                                                                  gCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCACAGCCGCATCCTGCTACAAATCGTGCACTATATCAAACGAACTTAATCACCCCa                                                                         >  2:316457/1‑143 (MQ=255)
                                                                    cTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCAACGCCGCATCCTGCTACAAATAGTGCACTATATCAAACTTACTTAATCAccaccgc                                                                       >  2:756663/1‑138 (MQ=255)
                                                                    cTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCAGATGCGGGGTCAACGCCGCATCCTGCTACAAATCGTGCACTATATCAAACTTACTTAATCACCCCAtt                                                                       >  2:427510/1‑143 (MQ=255)
                                                                     ttATCCAGCCCACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCAACGCCGCATCCTGCTACAAATCGTGCACTATATCAAACTTACTTAATCACCCCATTg                                                                      <  1:1061606/143‑1 (MQ=255)
                                                                      tATCCAGCCGACGTGTGGCAGCGGTTGTAGCTCTGATAAGACGCGCCAGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCAACGCCGCATCCTGCTACAAATCGTGCACTATATCAAACTTACTTAATCACCCCATTgc                                                                     <  1:519142/143‑1 (MQ=255)
                                                                      tATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGCCGTTGATTGCCGGATGCGGGGTCAACGCCGCATCCTGCTACACATCGTGCACTATCTCATACTTCCTTAATCACCCCATTgc                                                                     >  1:403556/1‑143 (MQ=37)
                                                                          caacggtcATGTGGCAGCGGTTGTAGGTCTGATAAGACGTGCAAGCGTCGTATCATATTTTTATTGTCTTATGCGTGGTCAACGCCGCATACTGCGACAAAGCGTGCACTATATCAAACTTACTTAATCACCCCATTGcgccg                                                                 <  1:463565/136‑1 (MQ=255)
                                                                           aGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCAACGCCGCATCCTGCTACAAATCGTGCACTATATCAAACTTACTTAATCACCCCATTGcgccgc                                                                >  2:988510/1‑143 (MQ=255)
                                                                           aGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCAACGCCGCATCCTGCTACAAATCGTGCACTATATCAAACTTACTTAATCACCCCATTGcgccgc                                                                >  2:988515/1‑143 (MQ=255)
                                                                           aGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCAACGCCGCATCCTGCTACAAATCGTGCACTATATCAAACTTACTTAATCACCCCAGTGcgccgc                                                                >  1:1099074/1‑143 (MQ=255)
                                                                           aGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGGTGATTGCCGGATGCGGGGTCAACGCCGCATCCTGCTACAAATCGTGCACTATATCAAACTTACTTAATCACCCCATTGcgccgc                                                                >  2:988509/1‑143 (MQ=255)
                                                                            gCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCAACGCCGCATCCTGCTACAAATCGTGCACTATATCAAACTTACTTAATCACCCCATTGCGCCGCa                                                               >  2:433144/1‑143 (MQ=255)
                                                                                aCATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGAAGCGGGGTCAACGCCGCATCCTGCTACAAATCGTGCACTATATCAAACTTACTTAATCACCCCATTGCGACGCAggtg                                                           >  1:326217/1‑143 (MQ=255)
                                                                                 cgaacaactgcggcgcaatggggtgattaagtaagtttgatatagtgcacgatttgtagcaGGATGCGGGGTCAACGCCGCATCCTGCt                                                                                                                <  2:1014329‑M1/28‑1 (MQ=255)
                                                                                 cgaacaactgcggcgcaatggggtgattaagtaagtttgatatagtgcacgatttgtagcaGGATGCGGGGTCAACGCCGCATCCTGCt                                                                                                                >  1:1014329‑M1/62‑89 (MQ=255)
                                                                                    gtgGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCAACGCCGCATCCGGCTACAAATCGTGCACTATATCAAACTTACTTAATCACCCCATTGCGCCGCAGTTGTTCg                                                       <  1:326354/143‑1 (MQ=255)
                                                                                         aGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCAACGCCGCATCCTGCTACAAATCGTGCACTATATCAAACTTACTTAATCACCCCAGTGCGCCGCAGTTGTTCGGTATc                                                  >  1:1099067/1‑143 (MQ=255)
                                                                                             aatgtgGGGCTTATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCAACGCCGCATCCTGCTACAAATCGTGCACTATATCAAACTTACTTAATCACCCCATTGCGCCGCAGTTGTTCGGTATCtttt                                              <  1:227046/141‑1 (MQ=255)
                                                                                              ttGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCAACGCCGCATCCTGCTACAAATCGTGCACTATATCAAACTTACTTAATCACCCCATTGCGCCGCAGTTGTTCGGTATCttttt                                             <  2:111388/143‑1 (MQ=255)
                                                                                                gTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCAACGCCGCATCCTGCTACAAATCGTGCACTATATCAAACTTACTTAATCACCCCATTGCGCCGCAGTTGTTCGGTATCTTTTTTc                                           <  1:870128/143‑1 (MQ=255)
                                                                                                    gTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCAACGCCGCATCCTGCTACAAATCGTGCACTCTATCAAACTTTCTTAATCACCCCATTGCGCCGCAGTTGTTCGGTATCTTTTTTCCAGc                                       >  2:235141/1‑143 (MQ=255)
                                                                                                    gTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCAACGCCGCATCCTGCTACAAATCGTGCACTATATCAAACTTACTTAATCACCCCATTGCGCCGCAGTTGTTCGGTATCTTTTTTCCAGc                                       >  1:410961/1‑143 (MQ=255)
                                                                                                         aTAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCAACGCCGCATCCTGCTACAAATCGTGCACTATATCCAACTTACTTAATCACCCCATTGCGCCGCAGTTGTTCGGTCTCTTTTTTCCAGCGTTCa                                  >  1:316696/1‑143 (MQ=255)
                                                                                                             gACGCGCAAGCGTCGCATCAGACGTTGCTTGCCGGATGCGGGGTCAACGCCGCATCCTGCTACAAATCGTGCACTATATCCAACTTACTTAATCACCCCCTTGCGCCGCCGTCGCTCGGTCTCCTCTTTCCAGCGCTCAATac                              >  2:475282/1‑142 (MQ=37)
                                                                                                              aCGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCAACGCCGCATCCTGCTACAAATCGTGCACTATATCAAACTTACTTAATCACCCCATTGCGCCGCCGCTGTCCGCTATCTTCTTTCCACCGTTccctcgc                             >  2:323462/1‑137 (MQ=38)
                                                                                                                   cgaGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCAACGCCGCATCCTGCTACAAATCGTGCACTATATCAAACTTACTTAATCACCCCATTGCGCCGCAGTTGTTCGGTATCTTTTTTCCAGCGTTCATTAGCTTGGt                        <  2:997690/141‑1 (MQ=255)
                                                                                                                    aaGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCAACGCCGCATCCTGCTACAAATCGTGCACTATATCAAACTTACTTAATCACCCCATTGCGCCGCAGTTGTTCGGTATCTTTTTTCCAGCGTTCATTAGCTTGGtt                       <  2:449274/143‑1 (MQ=255)
                                                                                                                    aaGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCAACGCCGCATCCTGCTACAAATCGTGCACTATATCAAACTTACTTAATCACCCCATTGCGCCGCAGTTGTTCGATATCTTTTTTCCAGCGTGCATCAgcttgctt                       >  2:738296/1‑143 (MQ=255)
                                                                                                                          cGCATCAGACGTTGATTGCCGGATGCGGGGTCAACGCCGCATCCTGCTACAAATCGTGCACTATATCAAACTTACTTAATCACCCCATTGCGCCGCAGTTGTTCGGTATCTTTTTTCCAGCGTTCATTAGCTTGGTTGATATc                 <  2:594845/143‑1 (MQ=255)
                                                                                                                             aTCAGACGTTGATTGCCGGATGCGGGGACAACGCCGCATCCTGCTACAAATCGTGCACTATATCAAACTTACTTAATCACCCCATTGCGCCGCAGTTGTTCGGTATCTTTTTTCTAGCGTTCATTAGCTTGGTTGATATCGTc              >  1:245429/1‑143 (MQ=255)
                                                                                                                              tCAGACGTTGATTGCCGGATGCGGGGTCAACGCCGCATCCTGCTACAAATCGTGCACTATATCAAACTTACTTAATCACCCCATTGCGCCGCAGGTGTTCGGTATCTTTTTTCCAGCGTTCATTAGCTTGGTTGATCTCGTCa             >  1:481909/1‑143 (MQ=255)
                                                                                                                                 gACGGTGATTGCCGGATGCGGGGTCAACGCCGCATCCGGCTACAAATCGTGCACTATATCAAACTTACTTGATCACCCCATTGCGCCGCAGTTGTTCGGTATCTTTTTTCCAGCGTTCATTAGCTTGGTTGATATCGTCAAtt          <  1:777562/143‑1 (MQ=255)
                                                                                                                                     ttgcttgcCGGAGGCGGGGTCAACGCCGCATCCTGCTACAAATCGTGCACTATATCAAACTTACTTAATCACCCCATTGCGCCGCAGTTGTTCGGTATCTTTTTTCCAGCGTTCATTAGCTTGGTTGATATCGTCAATTTtca      <  2:938106/143‑1 (MQ=255)
                                                                                                                                     ttGATTGCCGGATGCGGTGTCAACGCCGCATCCTGCTACAAATCGTGCACTATATCAAACTTACTTAATCACCCCATTGCGCCTCAGTTGTTCGGTATCTTTTTTCCAGCGTTCATTAGCTTGGTTGATATCGTCAATTTtca      <  2:307647/143‑1 (MQ=255)
                                                                                                                                         ttGCCGGATGCGGGGTCAACGCCGCATCCTGCTACAAATCGTGCACTATATCAAACTTACTTAATCACCCCATTGCGCCGCAGTTGTTCGGTATCTTTTTTCCAGCGTTCATTAGCTTGGTTGATATCGTCACTTTtcgtcag  >  1:1131051/1‑142 (MQ=255)
                                                                                                                                              |                                                                                                                                         
TTTTTAAATTCGCTGCTGGAGCTTTTTCTGGCTGAGTAAACTTGTATTGCCGGATGCGGCGTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCAACGCCGCATCCTGCTACAAATCGTGCACTATATCAAACTTACTTAATCACCCCATTGCGCCGCAGTTGTTCGGTATCTTTTTTCCAGCGTTCATTAGCTTGGTTGATATCGTCAATTTTCATCAA  >  NC_000913/3098365‑3098644

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.