BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3423376 =	49 (0.740)	7 (0.110)	6/260	NT	7.9%	intergenic (+182/+47)	yhdZ/rrfF	putative ABC transporter ATP‑binding subunit YhdZ/5S ribosomal RNA
*	?	NC_000913	= 4213162	114 (1.740)	7 (0.110)	6/260	NT	7.9%	intergenic (+3/‑72)	rrfE/yjaA	5S ribosomal RNA/stress response protein

Only 100 of 152 total aligned reads displayed.

GGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGCAAACGTGAAG  >  NC_000913/4213021‑4213303

ggTCTGATAAACCAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGCCCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAa                                                                                                                                              >  1:620788‑M2/1‑142 (MQ=255)

ggTCTGATAAAACAGAATTTGCGTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAa                                                                                                                                              >  2:92155‑M2/1‑142 (MQ=255)

ggTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAa                                                                                                                                              >  1:565125‑M2/1‑142 (MQ=255)

ggTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAa                                                                                                                                              <  1:651137‑M2/143‑2 (MQ=255)

 gTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTCGGGAACTGCCAGGCATCCAat                                                                                                                                             <  2:1146936‑M2/143‑3 (MQ=255)

   gtGAGAAAACAGAGGTTGCCGGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTa                                                                                                                                           <  2:888123/142‑1 (MQ=255)

   cTGATAAACCAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGACGTGAAACTACGGGTCGTCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAataa                                                                                                                                           >  1:480505‑M2/1‑139 (MQ=255)

    tGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAg                                                                                                                                          <  2:1151755/143‑1 (MQ=32)

    tGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAg                                                                                                                                          <  1:446046/143‑1 (MQ=32)

     gATAACACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGa                                                                                                                                         <  1:1097384/143‑1 (MQ=17)

     gATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAataaaa                                                                                                                                         >  2:875135‑M2/1‑137 (MQ=255)

     gATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAataaaa                                                                                                                                         >  1:1145345‑M2/1‑137 (MQ=255)

     gATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGa                                                                                                                                         <  1:5605/143‑1 (MQ=32)

      agaaaaCAGAATTCGCCGGGCGGCAGGAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGaa                                                                                                                                        <  1:1168263/141‑1 (MQ=255)

      aTAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAataaaac                                                                                                                                        <  2:924156‑M2/143‑8 (MQ=255)

      aTAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGaa                                                                                                                                        >  1:950604/1‑143 (MQ=33)

      aTAAAACAGAATTTCCCTGGCGCCAGTCGCGCGGTGGTCTCACCTGACCCCATGCCGAACTCAGAAGTGGAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGaa                                                                                                                                        <  2:250199/143‑1 (MQ=11)

       tAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGaaa                                                                                                                                       <  1:947383/143‑1 (MQ=34)

       tAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGaaa                                                                                                                                       <  1:874054/143‑1 (MQ=34)

        aaaaCAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGaaaa                                                                                                                                      >  2:351583/1‑143 (MQ=35)

         aaaCAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGCGCTGCCAGGCATCACATTAGacaaa                                                                                                                                     >  2:608818/1‑143 (MQ=255)

           aCAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAAcc                                                                                                                                   >  1:27458/1‑143 (MQ=38)

                    gCCTGGCGGCAGGAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCAt                                                                                                                          <  1:1228768/143‑1 (MQ=255)

                     ccTGGCGGCAGTAGCGCGGTGGGGCCAGCTTACTCCGTGCGGAACTCAGAAGTGAAACGCCGTAGCGCGGATGGTAGTGTGGGGTCTCCCAATGCGAGAGGAGGGAACTGCCAGGCAGCAAACTCGAAACACGCCGGTCCAtg                                                                                                                         >  2:778839/1‑142 (MQ=11)

                        ggcggcAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACGCAGAAGTGAAACGGCGTAGCGCCGATGCTAGTGTGGGGTCTCCCCATGCGAGAGGAAGGAACTACCAGGCAGCAAATTACACATACCCCGGACCATAAgg                                                                                                                      >  2:305024/1‑143 (MQ=14)

                               gTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAataaaacgaaaggcccagtcttccgactgagc                                                                                                               >  1:430890‑M2/1‑111 (MQ=255)

                                 aGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGACACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGCACTGCCAGGCATCAACTTAGAAAAAACCCGGTCCATAAGGCCGGGGttt                                                                                                             >  1:154776/1‑143 (MQ=255)

                                 aGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGACATCAAataaaacaaaaggcccagtcttccgactgagcct                                                                                                             >  1:586707‑M2/1‑109 (MQ=255)

                                  gcgcGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGCTGCTGCGGTGTGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGtttt                                                                                                            <  1:1272368/143‑1 (MQ=17)

                                  gcgcGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGACCTGCCAGGCGTCAAATCAGAAAAACCCCGGTCCATAAGACCGGGGtttc                                                                                                            >  2:939329/1‑142 (MQ=255)

                                  gcgcGGTGGTCCCACCGGACCCCATGCCGATGTGTGCGGTAAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATACGAGAGTAGGGAACTGCCAGGCATCAAataaaacgaaaggcccagtctttcgactgagcctt                                                                                                            >  2:562641‑M2/1‑108 (MQ=255)

                                    gcgGTCGTCCCTCCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATTGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGtttttt                                                                                                          <  1:77883/143‑1 (MQ=255)

                                     cggcggTCCCACCTGACCCCAGGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTg                                                                                                         <  2:934519/143‑1 (MQ=255)

                                      ggtggtCCCACCTGCCCCCATGCCGAACTCGGCAGTGACACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGc                                                                                                        <  2:749098/143‑1 (MQ=255)

                                      ggtggtCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAataaaacgaaaggcccagtcttccgactgagcctttcgt                                                                                                        >  2:882263‑M2/1‑104 (MQ=255)

                                      ggtggtCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGc                                                                                                        <  2:1197834/143‑1 (MQ=255)

                                           ccccACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATc                                                                                                   <  1:1042734/142‑1 (MQ=255)

                                            gccACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTCGTGTGGGGTATCCGCATGCGAGAGTAGGGAACTGCCAGGCATCAAAATAGCAACACACCGGTCCATACGGCGGGAGTCGTTCGCatgcca                                                                                                  >  2:165191/2‑139 (MQ=11)

                                            cccACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCAGTAAGGCCGGGGGTTTTTGCATAGCa                                                                                                  >  1:794089/1‑143 (MQ=255)

                                               aacTGACACCATGGCGAACGCAGAAGGGAAACGCCGGAGCTGCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAGACGGAGCTCGTAAGGCCGGGGTTTTTTGCATATCAatt                                                                                               <  2:395194/141‑1 (MQ=14)

                                                ccTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAatta                                                                                              <  1:1134733/143‑1 (MQ=255)

                                                 cTGACCCCATGCCGAACTCAGAAGCGAAACGCCGCAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAataaaactaaaggcccagtctttcgactgagcctttcgttttatttgatg                                                                                             >  1:735188‑M2/1‑93 (MQ=255)

                                                   ggccccATGCCGACCACAGAAGTGCAACGCCGTAGCGCCGCTGGTAGTGTGGGGTCTCCCCACGCGAGAGTAGGGAACTGCCAGGCACCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTAttt                                                                                           <  1:643205/141‑1 (MQ=21)

                                                   ggccccATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGACAGCAAGGAGCTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTAttt                                                                                           <  1:805001/141‑1 (MQ=255)

                                                   gACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGACGGTAGTGTGGGGTCTCCCCATGCGCGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATACGGCCGGGGATTTTTGCACAGCAattattg                                                                                           >  2:209986/1‑142 (MQ=18)

                                                    aCCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAACCCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTg                                                                                          >  2:1154049/1‑143 (MQ=255)

                                                     ccccATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGc                                                                                         <  2:719214/143‑1 (MQ=255)

                                                      ctcATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTGTCCACAGGCGAGAGTAGGGAAATGCGAGGGATCAAATTAGAAAAACACCGGTCCATAAGGCCGGGGATTTTTGGATATCAAGTATTTgga                                                                                        >  2:597072/3‑141 (MQ=18)

                                                           gCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGACTCCCCCTGCGAGAGTAGGGAACTGCAAGGCATCAAATTCGCGAACACCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAACTATTTGCatgatg                                                                                   >  2:836658/1‑143 (MQ=18)

                                                              gAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAg                                                                                <  1:837761/143‑1 (MQ=255)

                                                              gAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAAATGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTCTTTGCATATCCATAATATGCATGATGAAg                                                                                >  2:1278233/1‑143 (MQ=21)

                                                                 cTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGa                                                                             <  1:246316/143‑1 (MQ=255)

                                                                     ggaGTGAGACGCCGGAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAAtct                                                                         <  2:1264995/141‑1 (MQ=255)

                                                                     gAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTCGGGAACTGCCAGGCATCACATTAGAAAAACCCCGGTCCATAAGGCCGGGGGTTTTTGCATATCAATTATTTGCATGATGAAGGGCAtct                                                                         >  2:789592/1‑143 (MQ=255)

                                                                      aaGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATCATTTGCATGATGAAGGGGAtctc                                                                        >  1:847646/1‑143 (MQ=255)

                                                                       aGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTGTTTTGCATATCAATTATTTGCATGATGAAGGGAATCGCa                                                                       >  1:620654/1‑143 (MQ=255)

                                                                        tgaaaaCGCCGTAGCGCCGATGGTAGGGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATGAGAAAAACCCCGGTCCATAAGGCCGGGTTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCAt                                                                      <  2:944443/140‑1 (MQ=255)

                                                                        gcgAAACGCCGTAGCGCCGAGGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCAt                                                                      <  1:1200740/141‑1 (MQ=255)

                                                                        gTGAAACGCCGTAGCGCCGATGGGAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCAt                                                                      >  1:196286/1‑143 (MQ=255)

                                                                        gTGAAACGCCGGAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGCGCAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCAt                                                                      <  2:616516/143‑1 (MQ=255)

                                                                           aaaCGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTc                                                                   >  1:203766/1‑143 (MQ=255)

                                                                             aCGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAGTTATTTGCATGATGAAGGGAATCTCATGTCAg                                                                 >  1:260009/1‑143 (MQ=255)

                                                                               gCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGtt                                                               >  1:1213168/1‑143 (MQ=255)

                                                                                   tAGCGACGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGt                                                           <  1:1019575/143‑1 (MQ=255)

                                                                                     gcgcCGATGGTAGTGTGGGGGCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGtat                                                         <  1:902703/143‑1 (MQ=255)

                                                                                          gATGGTAGTGTGGGGTCCCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCa                                                    <  1:279980/143‑1 (MQ=255)

                                                                                            tGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAAGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCaaa                                                  <  1:1145486/143‑1 (MQ=255)

                                                                                            tGGTAGTGTGGGGCCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCaaa                                                  <  1:103209/143‑1 (MQ=255)

                                                                                                actgtgGGGTCTCCCCATGCGAGCGTAGGGTGCTGCCACGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATtcg                                              <  2:483070/141‑1 (MQ=255)

                                                                                                 tgggggggTCTCCCCTTGCGAGCGTAGGCAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATtcgt                                             <  2:598930/139‑1 (MQ=255)

                                                                                                  tgtgGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATtcgtc                                            >  1:943048/1‑143 (MQ=255)

                                                                                                    tgGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGACAAACCCCGGTCCATAAGGCCGGGGCTTTTTGCATATCAATTATCTGCATCATGAAGGGAATCTCATATCAGTTCTGTATATCCCAATCcgtcgt                                          >  2:784560/1‑143 (MQ=37)

                                                                                                    tgGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTcgtcgt                                          <  1:818510/143‑1 (MQ=255)

                                                                                                    tgGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTcgtcgt                                          <  1:693994/143‑1 (MQ=255)

                                                                                                      gggTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAACACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTac                                        >  1:128178/1‑142 (MQ=255)

                                                                                                        gTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGCTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAACTTCGTCGTAGTc                                      >  2:795972/1‑143 (MQ=255)

                                                                                                         tctcCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGAATATCAAGTATTTGCATGATGAAGGGAATCTCATGTCAGTGCTGTATATCCAAATTCGTCGCAGTCa                                     >  1:336706/1‑143 (MQ=38)

                                                                                                            ccccATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCGTGTCAGTTCTGTATAGCCAAATTCGGCGTAATCAAAt                                  >  2:342917/1‑143 (MQ=255)

                                                                                                            ccccATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCCGTTCTGTATATCCAAATTCGTCGTCATCAAAt                                  >  1:1167038/1‑143 (MQ=255)

                                                                                                             cccATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGATCTGTATATCCAAATTCGTCGTAATCAAAtt                                 >  2:1173110/1‑143 (MQ=255)

                                                                                                              ccATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAAtga                                >  2:805232/1‑141 (MQ=255)

                                                                                                              ccATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTa                                >  1:1024409/1‑143 (MQ=255)

                                                                                                               ctggCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTAc                               <  2:202795/140‑1 (MQ=255)

                                                                                                               cgtGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTAc                               <  2:1137698/141‑1 (MQ=255)

                                                                                                                     agagTAGGGAACTGCCAGGCATCAAATGAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTcg                         <  1:597796/143‑1 (MQ=255)

                                                                                                                       agTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGGTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCACGTCAGGTCTGTATATCCAACTTCGTCGAAATCAAATCACTGTCcgcg                       >  2:732471/1‑143 (MQ=255)

                                                                                                                          aGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATc                    >  1:428759/1‑143 (MQ=255)

                                                                                                                           gggAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCt                   >  1:1219315/1‑143 (MQ=255)

                                                                                                                            ggAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCtt                  >  2:709415/1‑143 (MQ=255)

                                                                                                                               aCTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGaa               >  2:1041136/1‑143 (MQ=255)

                                                                                                                                 tGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAg             >  1:455381/1‑143 (MQ=255)

                                                                                                                                   ccAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATACCCAAATTCGTCGTAATCAAATCACTGGTCGCGATCTTCAAAGCa           >  2:76581/1‑143 (MQ=255)

                                                                                                                                    cAGGCATCAAATTAGAAAACTGCGGGTCCATAAGGCAGGGGTTTTTTGCATAGTACTTATTTGCATGATGAAGGGAATCTCATGTCAGGTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGCTCTTGAAAGCaa          <  2:154776/143‑1 (MQ=255)

                                                                                                                                     aGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATAAATTATTTGCATGATGAAGGGAATCTAATGTCAGTTCTGTATATATAAATTCGTAGTAATCAAATTAATGTTCGCGATCTTGAACGCaaa         >  2:1256900/1‑143 (MQ=255)

                                                                                                                                      ggCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGCAAAc        <  2:775986/143‑1 (MQ=255)

                                                                                                                                        cATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGCGAACGt      >  2:1057041/1‑143 (MQ=255)

                                                                                                                                          tCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAGATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGCAAACGTGa    >  1:159728/1‑143 (MQ=255)

                                                                                                                                            aaaTTAGAAAAACCCCGGTCCATAAGGCCGGGTTTTTTTGCATATCAATTATTTGCATGCTGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAATCAAACACGAAg  >  2:667953/1‑143 (MQ=255)

                                                                                                                                            aaaTTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGCAAACGTGAAg  >  1:49587/1‑143 (MQ=255)

                                                                                                                                            aaaCTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTACTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAACTTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGCAAACGTGAAg  <  2:207672/143‑1 (MQ=255)

GGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGCAAACGTGAAG  >  NC_000913/4213021‑4213303

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 8 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.