| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,262,255 | G→C | 6.0% | S196T (AGC→ACC) | dusA → | tRNA‑dihydrouridine synthase A |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,262,255 | 0 | G | C | 6.0% | 341.8 / 8.5 | 121 | S196T (AGC→ACC) | dusA | tRNA‑dihydrouridine synthase A |
| Reads supporting (aligned to +/- strand): ref base G (56/57); new base C (3/5); total (59/62) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.18e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.90e-01 | |||||||||||
Only 100 of 121 total aligned reads displayed.
CGGTGACGGTGAAAACGCGTATTGGCATCGACGACCAGGACAGCTATGAATTTCTCTGCGATTTCATCAATACCGTTTCCGGCAAAGGCGAGTGTGAGATGTTCATCATCCACGCACGTAAAGCCTGGCTTTCGGGGTTAAGCCCGAAAGAAAACCGTGAAATCCCGCCGCTCGATTATCCGCGTGTGTATCAACTGAAGCGTGACTTTCCGCATCTGACAATGTCGATTAACGGTGGTATCAAGTCGCTGGAAGAGGCCAAAGCACACCTGCAACATATGG > NC_000913/4262114‑4262395 | cggtgactgtgaATACGCGTATTGGCATCGACGACCAGCACAGCTATGAATTTCTCTGCTATTTCATCAATACCGTTTCCGGCAAAGGCGAGTGTGAGATGTTCATCATCCACGCACGTAAAGCCTGGCTTTCGGGGTTAAGc < 2:227902/143‑1 (MQ=255)cggtgacggtgaAAACGCGTATTGGCATCGACGACCAGGACAGCTATGAATTTCTCTGCGATTTCATCAATACCGTGTCCGGCAAAGGCGAGTGTGAGATGTTCATCATCCACGCACGTAAAGCCTGGCTTTCGGGGTTAAGc < 2:141028/143‑1 (MQ=255) gacggtgaCACCGCGTATTGGCATCGACGACCAGGACAGCTATGAATTTCTCTGCGATTTCATCAATACCGTTTCCGGCAAAGGCGAGTGTGAGATGTTCATCATCCACGCACGTAAAGCCTGGCTTTCGGGGTTAAGCCCga < 1:1007161/143‑1 (MQ=255) gacggtgaAAAGGCGTATCGGCATCGACGACCAGGACAGCGATGAAGTTCTCTGCGATTTCATCAATACCGTTGCCGGCAAAGGCGAGTGTGAGATGTTCATCATCCACGCACGTAAAGCCTGGCTTTCGGGGTTAAGCCCga < 2:671028/143‑1 (MQ=255) gacggtgaAAACGCGCATTGGCATCGACGACCAGGACAGCTATGAATTTCTCTGCGATTTCATCAATACCGTTTCCGGCAAAGGCGAGTGTGAGATGTTCATCATCCACGCACGTAAAGCCTGGCTTTCGGGGTTAAGCCCga < 1:36665/143‑1 (MQ=255) cggtgaAAACGCGTATTGGCATCGACGACCAGGACAGCTATGAATTTCTCTGCGATTTCATCAATACCGTTTCCGGCAAAGGCGAGTGTGAGATGTTCATCATCCACGCACGTAAAGCCTGGCTTTCGGGGTTAAGCCCgaaa > 1:819242/1‑143 (MQ=255) cggtgaAAAAGCGTACTGGCAGCGACGACCAGGACAGCTATGAATTTCTCTGCGATTTCATCAATACCGTTTCCGGCAAAGGCGAGTGTGAGATGTTCATCATCCACGCACGTAAAGCCTGGCTTTCGGGCTTAACCCCgaaa < 1:527497/143‑1 (MQ=255) ccgtgaAAACGCGTATTCGACTAAACGACCATTACAGCTATCAAGTGCTCTGCGATTTCATCAATACCGTTTCCGGCAAAGGCGAGTGTGAGATGTTCATCATCCACGCACGTAAAGCCTGGCTTTCGGGCTTAACCCCgaaa < 1:473603/141‑1 (MQ=255) ggtgaAAACGCGTATTGGCATCGACGACCAGGACAGCTATGAATTTCTCTGCGATTTCATCAATACCGTTTCCGGCAAAGGCGAGTGTGAGATGTTCATCATCCACGCACGTAAAGCCTGGCTTTCGGGGTTAAGCCCgaaag > 2:1223299/1‑143 (MQ=255) gtgaAAACGCGTATTGGCATCGACGACCAGGACAGCTATGGAGAAACCTGCGATGTCATCAATACCGTTTCCGGCAAAGGCGAGTGTGAGATGTTCATCATCCACGCACGTAAAGCCGGGCTTCCGGGGTTAAGCACgaagga > 2:700968/1‑143 (MQ=255) tgaAAACGCGTATTGGCATCGACGACCAGGACAGCTATGAATTTCTCTGCGATTTCATCAATACCGTTTCCGGCAAAGGCGAGTGTGAGATGTTCATCATCCACGCACGTAAAGCCTGGCTTTCGGGGTTAAGCCCgaaagaa < 2:455002/143‑1 (MQ=255) gaAACCGCGGATTGGCATCGACGACCAGGACAGCTATGAATTTCTCTGCGATTTCATCAATACCGTTTCCGGCAAAGGCGAGTGTGAGATGTTCATCATCCACGCACGTAAAGCCTGGCTTTCGGGCTTAACCCCgaaagcca < 1:1123380/143‑4 (MQ=255) aaaaCGCGTATTGGCATCGACGACCAGGACAGCTATGAATTTCTCTGCGATTTCATCAATACCGTTTCCGGCAAAGGCGAGTGTGAGATGTTTATCATCCACGCACGTAACGCCTGGCCTTCGGGGATAAGCCCGAAAGaaaa > 2:874646/1‑143 (MQ=255) aaaaCGCGTATTGGCATCGACGACCAGGACAGCTATGAATTTCTCTGCGATTTCATCAATACCGTTTCCGGCAAAGGCGAGTGTGAGATGTTCATCATCCACGCACGTAAAGCCTGGCTTTCGCGGTTAAGCCCGAAAGcaaa > 2:1057543/1‑143 (MQ=255) agaCGCGTATTGGCAGCGACGACCAGGACAGCTATGAATTTCTCTGCGATTTCATCAGTACCGTTTCCGGCAAAGGCGAGTGTGAGATGTTCATCATCCACGCACGTAAAGCCTGGCTTTCGGGCTTAACCCCgaaagccagg < 2:450451/141‑6 (MQ=255) cgcgTATTGGCATCGACGACCAGGACAGCTATGAATTTCTCTGCGATTTCATCAATACCGTTTCCGGCAAAGGCGAGTGTGAGATGTTCATCATCCACGCACGTAAAGCCTGGCTTTCGGGGCTAAGCCCGAAAGAAAACCGt > 2:1135505/1‑143 (MQ=255) cggaTTGGCATCGACGACCAGGACAGCTATGAATTTCTCTGCGATTTCATCAATACCGTTTCCGGCAAAGGCGAGTGTGAGATGTTCATCATCCAAGCAAGTACAGTTCAATTTTCGTGGTTAAGCCCGAAAGAAAACCGTGa < 1:244171/140‑1 (MQ=255) gtccgggCATCGGCCACCAGGACAGCGATGAATTTCTCTGCGATTTCCTCAATACCGCTTCCGGCAAAGGCGAGTGTGAGATGTTCATCATCCACGCACGTAAAGCCTGGCTTTCGGGGTTAAGCCCGAAAGAAAACCGTGaa < 2:638729/138‑1 (MQ=255) tATTGGCATCGACGACCAGGACAGCTATGAATTTCTCTGCGATTTCATCAATACCGTTTCCGGCAAAGGCGAGTGTGAGATGTTCATCATCCACGCACGTAAAGCCTGGCTTTCGGGGTTAAGCCCGAAAGAAAACCGTGaaa < 1:1191186/143‑1 (MQ=255) atgggCACCGCCGACCAGGCCAGCTATGAATTTCTCTGCGATTTCATCAATACCGTTTCCGGCAAAGGCGAGTGTGAGATGTTCATCATCCACGCACGTAAAGCCTGGCTTTCGGGGTTAAGCCCGAAAGAAAACCGTGAAAt < 2:1090746/140‑1 (MQ=255) ttGGCATCGACGACCAGGACAGCTATGCATTTCTCTGCGATTTCATCAATACCGTTTCCGGCAAAGGCGAGTGTGAGATGTTCATCATCCACGCACGTAACGCCTTGCTTCCGGCGTTCAGCCCGCCAGAAACCCGTCACATc > 1:276428/1‑143 (MQ=255) gCATCGACGACCAGGACAGCTATGAATTTCTCTGCGATTTCATCAATACCGTTTCCGGCAAAGGCGAGTGTGAGATGTTCATCATCCAAGCACGTAAAGCCTGGCTTTCGGGGTTACGCCCGAAAGAAAACCGTGAAATCccg > 1:196583/1‑143 (MQ=255) cATCGACGACCAGGACAGCTATGAATTTCTCTGCGATTTCATCAATACCGTTTCCGGCAAAGGCGAGTGTGAGATGTTCATCATCCACGCACGTAAAGCCTGGCTTTCGGGGTTAAGCCCGAAAGAAAACCGTGCAATCccgc > 2:709108/1‑143 (MQ=255) tCGACGACCAGGACAGCTATGAATTTCTCTGCGATTTCATCAATACCGTTTCCGGCAAAGGCGAGTGTGAGATGTTCATCATCCACGCACGTAAAGCCTGGCTTTCGGGGTTAAGCCCGAAAGAAAACCGTGAAATCccgccg < 1:137137/143‑1 (MQ=255) tCGACGACCAGGACAGCTATGAATTTCTCTGCGATTTCATCAATACCGTTTCCGGCAAAGGCGAGTGTGAGATGTTCATCATCCACGCACGTAAAGCCTGGCTTTCGGGGGTAAGCCCGAAAGCACACAGCGTAACCccgccg > 2:195240/1‑143 (MQ=255) tCGACGACCAGGACAGCTATGAATTTCTCTGCGATTTCATCAATACCGTTTCCGGCAAAGGCGAATGTGAGATGTTCATCATCCACGCACGTAAAGCCTGGCTTTCGGGGTTAAGCCCGAAAGAAAACCGTGAACTCccgccg > 1:160708/1‑143 (MQ=255) acgacCAGGACAGCTATGAATTTCTCTGCGATTTCATCAATACCGTTTCCGGCAACGGCGAGTGTGAGATGTTCATCATCCACGCACGTAAAGCCTGGCTTTCGGGGTTAAGACCGCAAGAAAACCGTGAAATCCcgccgcgc > 2:253261/1‑141 (MQ=255) gacCAGGACAGCTATGAATTTCTCTGCGATTTCATCAATACCGTTTCCGGCAAAGGCGAGTGTGAGATGTTCATCATCCACGCACGTAAAGCCTGGCGTTCGGGGTTAAGCCCGAAAGAAAACCGTGAAATCCCGCAGCTCGa > 1:1202988/1‑143 (MQ=255) aGGACGGCTGCGGATTTCTCTGCTGTTTCATCAATACCGTTTCCGGCAAAGGCGAGTGTTAGATGTTCATCATCCACGCACGTAAAGCCTGGCTTTCGGGGTTAAGCCCGAAAGAAAACCGTGAAATCCCGCCGCTCGATTAt < 2:321165/143‑1 (MQ=255) gCTATGAATTTCTCTGCGATTTCATCAATACCGTTTCCGGCAAAGGCGAGTGTGAGATGTTCATCATCCACGCACGTAAAGCCTGGCTTTCGGGGTTAAGCCCGAAAGAAAACCGTGAAATCCCGCCGCTCGATTATCCGCgt < 1:267436/143‑1 (MQ=255) cTATGAATTTCTCTGCGATTTCATCAATACCGTTTCCGGCAAAGGCGAGTGTGAGCTGTTCATCATCCACGCACGTAACGCCTGGCTTGCGGGGTGAAGGCCGCACGAAAGCCGTGAAATCCCGCGGCTCGATAATCcgcgcg > 2:380796/1‑141 (MQ=255) tATGAATTTCTCTGCGATTTCATCAATACCGTTTCCGGCAAAGGCGAGTGTGAGATGTTCATCATCCACGCACGTAAAGCCTGGCTTTCGGGGTTAAGCCCGAAAGAAAACCGTGAAATCCCGCCGCTCGATTATCCGCgtgt < 2:521067/143‑1 (MQ=255) tATGAATTTCCCTGCGATTTCAGCAATTCCGTTCCCGGCAAAGGCGAGTGTGAGATGTTCATCATCCACGCACGTAAAGCCTGGCTTTCGGGGTTAAGCCCGAAAGAAAACCGTGAAATCCCGCCGCTCGATTATCCGCgtgt < 2:673830/143‑1 (MQ=255) gAATTTCTCTGCGATTTCATCAATCCCGTTTCCGGCAAAGCCGAGTGGGAGATGGTCATCATCCCCGCACGTAGCGCCTGGCTTTCGGGGTTAAGCGCGAAAGAAAACCGTGACATCACGCCGGCGGCTCATCCGCATGTGTa > 1:430909/1‑143 (MQ=255) aaTTTCTCTGCGATTTCATCAATACCGTTTCCGGCAAAGGCGAGTGTGAGATGTTCATCATCCACGCACGTAAAGCCTGGCTTTCGGGGTTAAGCCCGAAAGAAAACCGTGAAATCCCGCCGCTCGATTATCCGCGTGTGTAt > 1:509478/1‑143 (MQ=255) aaTTTCTCTGCGATTTCATCAATACCGTTTCCGGCAAAGGCGAGTGTGAGATGTTCAGCATCCACGCACGTAAAGCCTGGCTTTCGGGGTTAAGCCCGAAAGAAAACCGTGAAATCCCGCCGCTCGATTATCCGCGTGTGTAt < 1:1246411/143‑1 (MQ=255) aTTTCTCTGCGATTTCATCAATACCGTTTCCGGCAAAGGCGAGTGTGAGATGTTCATCATCCACGCACGTAAAGCCTGGCTTTCGGGGTTAAGCCCGAAAGAAAACCGTGAAATCCCGCCGCTCGATTATCCGCGTGTGTATc > 1:1135601/1‑143 (MQ=255) aTTTCTCGGCGATTTCATCAATACCGTTTCCGGCAAAGGCGAGTGTGAGATGTTCATCATCCACGCACGTAAAGCCTGGCTTTCGGGGTTAAGCCCGAAAGAAAACCGTGAAATCCCGCCGCTCGATTATCCGCGTGTGTATc < 1:103104/143‑1 (MQ=255) ttCTCGGCGATTGCATCAATACCGTGCCCGGCAAAGGCGAGTGTGAGATGTTCATCATCCACGCACGTAAAGCCTGGCTTTCGGGGTTAAGCCCGAAAGAAAACCGTGAAATCCCGCCGCTCGATTATCCGCGTGTGTATCaa < 1:560440/143‑1 (MQ=255) tctGCGATTTCATCAATACCGTTTCCGGCAAAGGCGAGTGTGAGATGTTCATCATCCACGCACGTAAAGCCTGGCTTTCGGGGTTAAGCCCGAAAGAAAACCGTGAAATCCCGCCGCTCGATTATCCGCGCGTGTATCAACTg > 1:407270/1‑143 (MQ=255) ttGCGGTTTCATCAATACCGTTTTCGGCAAAGGCGAGTGTGAGATGTTCATCATCCACGCACGTAAAGCCTGGCTTTCGGGGTTAAGCCCGAAAGAAAACCGTGAAATCCCGCCGCTCGATTATCCGCGTGTGTATCAACTGa < 1:1014000/142‑1 (MQ=255) gATTTCATCAATACCGTTTCCGGCAAAGGCGAGTGTGAGATGTTCATCATCCACGCACGTAAAGCCTGGCTTTCGGGGTTCAGCCCGAAACAAAACCGTGAAATCCCGCCGCTCGATTATACGCGTGTGTATCAACTGAAGCg > 1:95798/1‑143 (MQ=255) gATTTCATCAATACCGTTTCCGGCAAAGGCGAGTGTGAGATGTTCATCATCCACGCACGTAAAGCCTGGCTTTCGGGGTTACGCCCGCAAGAAAACCGTGACATCCCGCCGCCCGATTCTCCGCGTGTGTctcaactcaaccc > 2:1210536/1‑140 (MQ=255) ttCGTCAATACCGTTTCCGGCAAAGGCGAGGGGGAGATGTTCATCATCCACGCACGTAAAGCCTGGCTTTCGGGGTTAAGCCCGAAAGAAAACCGTGAAATCCCGCCGCTCGATTATCCGCGTGTGTATCAACTGAAGCGTGa < 2:502436/143‑1 (MQ=255) ttCATCAATACCGTTTCCGGCAAAGGCGAGTGTGAGATGTTCATCATCCACGCACGTAAAGCCTGGCTTTCGGGGTTAAGCCCGAAAGAAAACCGTGAAATCCCGCCGCTCGATTATCCGCGTGTGTATCAACTGAAGCGTGa < 1:765870/143‑1 (MQ=255) ttCATCAATACCGTTTCCGGCAAAGGCGAGTGTGAGATGTTCATCATCCACGCACGTAAAGCCTGGCTTTCGGGGTTAAGCCCGAAAGAAAACCGTGAAATCCCGCCGCTCGATTATCCGCGTGTGTATCAACTGAAGCGTGa > 1:1047427/1‑143 (MQ=255) atcaggaCCGGTTCCGGCAAAGGCGAGTGTGAGATGTTCGTCATCCACGCACGTAAAGCCTGGCGTTCGGGGTTAAGCCGGAAAGAAAACCGTGAAAGCCCGCCGCTCGATTATCCGCGTGTGTATCAACTGAAGCGTGACtt < 2:540178/137‑1 (MQ=255) atcaATACCGTTTCCGGCAAAGGCGAGTGTGAGATGTTCATCATCCACGCACGTAAAGCCTGGCTTTCGGGGTTAAGCCCGAAAGAAAACCGTGAAATCCCGCCGCTCGATTATCCGCGGGTGTATCAACTGAAGCGTGACtt > 1:656123/1‑143 (MQ=255) tcaATACCGTTTCCGGCAAAGGCGAGTGTGAGATGTTCATCATCCACGCACGTAAAGCCTGGCTTTCGGGGTTAAGCCCGAAAGCAAACCGTGAAATCCCGCCGCTCGATTCTCCGCGCGTGCATCAACTGCAGCGTGCCtct > 2:340163/1‑141 (MQ=255) caATACCGTTTCCGGCAAAGGCGAGTGTGAGATGTTCATCATCCACGCACGTAAAGCCTGGCTTTCGGGGTTAAGCCCGAAAGAAAACCGTGAAATCCCGCCGCTCGATTATCCGCGTGTGTATCAACTGAAGCGTGACTTTc < 2:1124512/143‑1 (MQ=255) aTACCGTTTCCGGCAAAGGCGAGTGTGAGATGTTCATCATCCACGCACGTAAAGCCTGGCTTTCGGGGTTAAGCCCGAAAGAAAACCGTGAAATCCCGCCGCTCGATTATCCGCGTGTGTATCAACTGAAGCGTGACTTTCCg > 1:1161225/1‑143 (MQ=255) aTACCGTTTCCGGCAAAGGCGAGTGTGAGATGTTCATCATCCACGCACGTAAAGCCTGGCTTTCGGGGTTAAGCCCGAAAGAAAACCGTGAAATCCCGCCGCTCGATTATCCGCGTGTGTACCAACTAAAGCGTGCCTTTCCg > 2:47779/1‑143 (MQ=255) tACCGTTTCTGGCAAAGGCGAGTGTGAGGTGTTCATCATCCACGCACGTAAAGCCTGGCTTTCGGGGTTAAGCCCGAAAGAAAACCGTGAAATCCCGCGGCTCGATTATCCGCGTGTGTATCAACTGAAGCGTGACTTTCCGc < 2:89988/143‑1 (MQ=255) aCCGTTTCCTGCAAAGGCGAGTGTCAGATTTTCATCATCCACGCACGTAAAGCCTGGCTTTCGGGGTTAAGCCCGAAAGAAAACCGTGAAATCCCGCCGCTCGATTATCCGCGTGTGTATCAACTGAAGCGTGACTTTCCGCa < 1:148869/143‑1 (MQ=255) aCCGTTTCCGGCAAAGGCGAGTATCAGATCATTCTCATTTACTGACGTAAAGCCTGGCTTTCGGGGGTAAGCACTGGATATGACGGTTAATGTCCACCGCGCGAACATCCGCGTTTATAGCAACAGACGCGTGACTCTCCGCa > 2:972307/1‑143 (MQ=255) ccGTTTCCGGCAAAGGCGAGTGTGAGATGTTCATCATCCACGCACGTAAAGCCTGGCTATCGTGGTTAAGCCCGCAAGAAACCCGCGCAATCCCCCCGCCCGACTATCCGCCTGCGCACCCACTGACGCGTGACCTTCCGCac > 2:843449/1‑142 (MQ=255) gttgcgtgCAAAGGCGAGTGTGAGATGGTCATCATCCACGCACGTAAAGCATGGGTTTAGCGACGAGCCCCGAAAGAAAACCGTGAAATCCCGCCGCTCGATTATCCGCGTGTGTATCAACTGAAGCGTGACTTTCCGCATCt < 1:1271570/136‑1 (MQ=255) gTTTCCGGCAAAGGCGAGTGTGAGATGTTCATCATCCACGCACGTAAAGCCTGGCTTTCGGGGTTAAGCCCGAAAGAAAACCGTGAAATCCCGCCGCTCGATTATCCGCGTGTGTATCAACTGAAGCGTGACTTTGCGGATCt > 2:1166298/1‑143 (MQ=255) ttgcGGCAAACGCGAGGGTGACATGTTCATCATCCACGCACGTAAAGCCTGGCTTTCGGGGTTAAGCCCGAAAGAAAACCGTGAAATCCCGCCGCTCGATTATCCGCGTGTGTATCAACTGAAGCGTGACTTTCCGCATCTGa < 1:829628/140‑1 (MQ=255) ttCCGGCAAAGGCGAGTGTGAGATGTTAATCATCCACGCGCGTAAAGCCTGGCTTTCGGGGTTAAGCCCGAAAGAAAACCGTGAAATCCCGCCGCTCGATTATCCGCGTGTGTATCAACTGAAGCGTGACTTTCCGCATCTgc > 2:848423/1‑142 (MQ=255) ccGGCAAAGGCGAGTGTGAGATGTTCATCATCCACGCACGTAAAGCCTGGCTTTCGGGGTTAAGCCCGAAAGAAAACCGTGAAATCCCGCCGCTCGATTATCCGCGTGTGTATCAACTGAAGCGTGACTTTCCGCATCTGACa > 2:591383/1‑143 (MQ=255) cgacggCGAGTGTGAGATGTTCACCCGCCACGCACGTAAACGCTGGCTTTCGGGGTTAAGCCCGAAAGAAAACCGTGAAATCCCGCCGCTCGATTATCCGCGTGTGTATCAACTGAAGCGTGACTTTCCGCATCTGACAATGt < 2:619794/139‑1 (MQ=255) cAAAGGCGAGTGTGAGATGTTCATCATCCACGCACGTAAAGCCTGGCTTTCGGGGTTAAGCCCGAAAGAAAACCGTGAAATCCCGCCGCTCGATTATCCGCGTGTGTATCAACTGAAGCGGGACTATCCGCACCTGACacagt > 2:1126013/1‑139 (MQ=255) gCGAGTATGAGGTGTTCATCATCCACGCACGTAAAGCCTGGCTTTCGGGGTTAAGCCCGAAAGAAAACCGTGAAATCCCGCCGCTCGATTATCCGCGTGTGTATCAACTGAAGCGTGACTTTCCGCATCTGACAATGTCGAtt < 1:1101753/143‑1 (MQ=255) gggaTGTTCATCATCCGCGCACGTGACGCCTGCACTCCTACGGGAAGGCGGAAAGAAAACCGTGAAATCCCGCCGCTCGATTATCCGCGTGTGTATCAACTGAAGCGTGACTTTCCGCATCTGACAATGTCGATTAACggtgg < 2:563183/141‑1 (MQ=255) gagaTGTTCATCATCCACGCACGTAAAGCCTGGCTTTCGGGGTTAAGCCCGAAAGAAAACCGTGAAATCCCGCCGCTCGATTATCCGCGTGTGTATCAACTGAAGCGTGACTTTCCGCATCTGACAATGTCGATTAACggtgg < 1:857862/143‑1 (MQ=255) agaTGTTCATCATCCACGCACGTAAAGCCTGGCTTTCGGGGTTAAGCCCGAAAGAAAACCGTGAAATCCCGCCGCTCGATTATCCGCGTGTGTATCAACTGAAGCGTGACTTTCCGCATCTGACAATGTCGATTAACggtggt > 1:146469/1‑143 (MQ=255) tcatcaTCCACGCACGGAAAGCCTGGCTTTCGGGGTTAAGCCCGAAAGAAAACCGTGAAATCCCGCCGCTCGATTATCCGCGTGTGTATCAACTGAAGCGTGACTTTCCGCATCTGACAATGTCGATTAACGGTGGTATCAAg < 1:974204/143‑1 (MQ=255) ctcatcCACGTACGTAACGCAGGGCTTTCGGGGTTAAGCCGAAAATAAAACCGGGAAATCCAGCCGCTCGATCATCCGCGTGTGTATCAACTGAAGCGTGACGTCCCGCATCTGACAATGTCGATTAACGGTGGTATCAAGTc < 1:253261/142‑1 (MQ=255) atcCACGCACGTAAAGCCTGGCTTTCGGGGTTAAGCCCGAAAGAAAACCGTGAAATCCCGCCGCTCGATTATCCGCGTGTGTATCAACTGAAGCGTGACTTTCCGCATCTGACAATGTCGATTAACGGTGGTATCAAGTCGCt < 2:1084878/143‑1 (MQ=255) atcCACGCACGTAAAGCCTGGCTTTCGGGGTTAAGCCCGAAAGAAAACCGTGAAATCCCGCCGCTCGATTATCCGCGTGTGTATCAACTGAAGCGTGACTTTCCGCATCTGACAATGTCGATTAACGGTGGTATCAAGTCGCt < 1:1281592/143‑1 (MQ=255) gcgcacgTAAACCCTGGCTTTCGGGGTTAAGCCCTAAAGAAAACCGTGAACTCCCGCCGCTCGATTATCCGCGTGTGTATCAACTGAAGCGTGACTTTCCGCATCTGACAATGTCGATTAACGGTCGTATCAAGTCGCTGCaa < 2:1050509/142‑1 (MQ=255) acgcacgTAAAGCCTGGCTTTCGGGGTTAAGCCCGAAAGAAAACCGTGAAATCCCGCCGCTCGATTATCCGCGTGTGTATCAACTGAAGCGTGACATTAAGATATTAAGAAAGTCGATTAACGGTGGTATCAAATCGCTGGaa > 2:1239786/1‑143 (MQ=255) acgcacgTAAAGCCTGGCTTTCGGGGTTAAGCCCGAAAGAAAACCGTGAAATCCCGCCGCTCGATTATCCGCCGGTGTATCAACTGAAGCGTCGCTTTACGCGTCTGACACTGTCGATTAGCGGTGGTCGCATGTCGCtccga > 2:1226809/1‑139 (MQ=255) gcacgTAAAGCCTGGCTTTCGGGGTTAAGCCCGAAAGAAAAACGTGAAATCCCGCCGCTCGATTATCCGCGTGTGTATCAACTGAAGCGTGACTTTCCGCATCTGACAATGTCGAGTAACGGTGGTATCAAGACGCTGGaaca > 1:1031752/1‑141 (MQ=255) catgTAAAGCCTGGCTTTCGGGGTTAAGCCCGAAAGAAAACCGTGAAATCCCGCCGCTCGATTATCCGCGTGTGTATCAACTGAAGCGTGACTTTCCGCATCTGACAATGTCGATTAACGGTGGTATCAAGTCGCTGGAagag < 1:983746/140‑1 (MQ=255) cacggcaaGCCTGGCTTTCGGGGTTACGCCCGAAAGCAACCCGTGAAATCCCGCCGCTCGATTCTCCGCGTGTGCATCAACTGAAGCGTGACTTTCCGCTTCTGACAATGTCGATTAACGGTGGTATCAAGTCGCTGGAagag < 1:700968/137‑1 (MQ=255) gtagggCCGGGCTTTCGGGGTTAAGCCCGAAAGAGAACCGTGAAGTCCCGCCGCTCGATTATCCGCGTGTGTATCAACTGCGGCGTGACTTTCCGCATCTGACAATGTCGATTAACGGTGGTATCAAGTCGCTGGAAGAGGcc < 1:257240/138‑1 (MQ=255) tAAAGCCTGGCTTTCGGGGTTAAGCCCGAAAGAAAACCGTGAAATCCCGCCGCTCGATTATCCGCGTGTGTATCAACTGAAGCGTGACTTTCCGCATCTGACAATGTCGATTAACGGTGGTATCACGTCGCTGGCAGAGGCCa > 1:30765/1‑143 (MQ=255) tgCCTCGCTTTCGGGCGTGAGCCCGCAAGAAAACCGTGAAAGCCCGCCGCTCGATTAGCCGCGTGTGGATCAACTGAAGCGTGACTTTCCGCATCTGACAATGTCGATTAACGGTGGTAGCAAGTCGCTGGAAGAGGCCAAAg < 2:1008086/142‑1 (MQ=255) gCCTGGCTTTCGGGGTTAAGGCCGAAAGCAAACCGGGGAAGCCCGCCGGTCGATTATCCGCGTGTGTATCAACTGAAGCGTGACTTTCCGCATCTGACAATGTCGATTAACGGTGGTATCAAGTCGCTGGAAGAGGCCAAAGc < 2:559748/143‑1 (MQ=255) ccTGGCTTTCGGGGTTAAGCCCGAAAGAAAACCGTGAAATCCCGCCGCTCGATTATCCGCGTGTGTATCAACTGAAGCGTGACTTTCCGCATCTGACAATGTCGATTAACGGTGGTATCAAGTCGCTGGAAGAGGCCAAAGca < 1:703485/143‑1 (MQ=255) tGGCTTTCGGGGTTAAGCCCGAAAGAAAACCGTGAAATCCCGCCGCTCGATTATCCGCGTGTGTATCAACTGAAGCGTGACTTTCCGCATCTGACAATGTCGATTAACGGTGGTATCAAGTCGCTGGCAGCGGCCAAAGcaca > 1:316050/1‑143 (MQ=255) tGGCTTTCGGGGTTAAGCCCGAAAGAAAACCGTGAAATCCCGCCGCTCGATTATCCGCGTGTGTATCAACTGAAGCGTGACTTTCCGCATCTGACAATGTCGATTAACGGTGGTATCAAGTCGCTGGAAGAGGCCCAAGcaca > 1:738146/1‑143 (MQ=255) tGGCTTTCGGGGTTAAGCCCGAAAGAAAACCGTGAAATCCCGCCGCTCGATTATCCGCGTGTGTATCAACTGAAGCGTGACTTTCCGCATCTGACAATGTCGATTAACGGTGGTATCAAGTCGCTGGAAGAGGCCACAGcaca > 1:1192524/1‑143 (MQ=255) tGGCTTTCGGGGTTAAGCCCGAAAGAAAACCGTGAAATCCCGCCGCGCGATTATCCGCGTGTGTATCAACTGAAGCGTCACTTTCCGCATCTGACGATGTCGATTCACGGCGGTCTCAAGTCGCCGGAGGAGGCCAAAGcaca > 2:307401/1‑143 (MQ=255) ttcTTTCGGGCTTAACCTCGAAAGAAAACCGTGAAATCCCGCCGCTCGATTATCAGCGTGTCTACCAACTGAAGCGTGACCTTCCGCATCTGACAATGTCGCTTAACGGCGATATCAAGTCGCTGGAAGAGGCCAAACCacac > 2:842858/3‑143 (MQ=255) ggCTTTCGGGGTTAAGCCCGAAAGAAAACCGTGAAATCCCGCCGCTCGATTATCCGCGTGTGTATCAACTGAAGCGTGACTTTCCGCATCTGACAATGTCGATTAACGGTGGTATCAAGTCGCTGGAAGAGGCCAAAGCacac > 1:72194/1‑143 (MQ=255) ctcgcGGGGTTCAGCCGGAAAGCAAACGGTGAAATCCCGCCGCTCGATTATCCGCGTGTGTATCAACTGAAGCGTGACTTGCCGCATCTGACAAGGTCGATTAACGGTGGTATCAAGTCGCTGGAAGAGGCCAAAGCACACCt < 2:185064/139‑1 (MQ=255) cTTTCGGGGTTAAGCCCGAAAGAAAACCGTGAAATCCCGCCGCTCGATTATCCGCGTGTGTATCAACTGAAGCGTGACTTGCCGCATCTGACAATGTCGATTAACGGTGGTATCAAGTCGCTGGAAGAGGCCAAAGCACACCt < 2:360251/143‑1 (MQ=255) cTTTCGGGGTTAAGCCAGAAAGAAAACCGTGAAATCCCGCCGCTCGATTATCCGCGTGTGTATCAACTGCAGCGTGACTTTCCGCATCTGACAATGTCGATTAACGGTGGTATCAAGTCGCTGGAAGAGGCCAAAGCACACCt < 1:942263/143‑1 (MQ=255) tttCGGGGTTAAGCCCGAAAGAAAACCGTGAAATCCCGCCGCTCGATTATCCGCGTGTGTATCAACTGAAGCGTGACTTTCCGCATCTGACAATGTCGATTAACGGTGGTATCAAGTCGCTGGAAGAGGCCAAAGCACACCTg > 1:591752/1‑143 (MQ=255) tttCGGGGTTAAGCCCGAAAGAAAACCGTGAAATCCCGCCGCTCGATTATCCGCGTGTGTATCAACTGAAGCGTGACTTTCCGCATCTGACAATGTCGATTAACGGTGGTATCAAGTCGCGGGAAGAGGCCAAAGCACACCTg < 1:294724/143‑1 (MQ=255) ttCGGGGTTAAGCCCGAAAGAAAACCGTGAAATCCCGCCGCTCGATTATCCGCGTGTGTATCAACTGAAGCATGACTTTCCGCATATGACAATGTCGATTAACGGGGGTATCGAGTCGCTGGGAGAGGCCAAAGGACACCTGc > 2:539344/1‑143 (MQ=255) ttCGGGCTTAACCCCGAAAGAAAACCGTGAAATCCCGCCGCTCGATTATCCGCGTGTGTATCAACTGAAGCGTGACTTTCCGCATCTGACAATGTCGATTAACGGTGGTATCAAGTCGCTGGAAGAGGCCAAAGCACACCTGc > 2:781107/1‑143 (MQ=255) cGGGGTTAAGCCCGAAAGAAAACCGTGAAATCCCGCCGCTCGATTATCCGCGTGTGTATCAACTGAAGCGTGACTTTCCGCATCTGACAATGTCGATTAACGGTGGTATCAAGTCGCTGGAAGAGGCCAAAGCACACCTGCaa < 1:1135505/143‑1 (MQ=255) ggggTTAAGCCCGAAAGAAAACCGTGAAATCCCGCCGCTCGATTATCCGCGTGTGTATCAACTGTAGCGTGACTTTCCGCATCTGACAATGTCGATTAACGGTGGTATCAAGTCGCTGGAAGAGGCCACAGCACACCTGCAAc > 1:423389/1‑143 (MQ=255) gggTTAAGCCCGAAAGAAAACCGTGAAATCCCGCCGCTCGATTATCCGCGTGTGTATCAACTGAAGCGTGACCTTCCGCATCTGACAATGTCGATTAACGGTGGGATCAAGTCGCTGGAAGAGGCCAAAGCACACCTGCGACa > 1:518117/1‑143 (MQ=255) gTTAAGCCCGAAAGAAAACCGTGAAATCCCGCCGCTCGATTATCCGCGTGTGTATCAACTGAAGCGTGACTTTCCGCATCTGACAATGTCGATTAACGGTGGTATCAAGTCGCTGGAAGAGGCCAAAGCACACCTGCAACata < 1:754315/143‑1 (MQ=255) aaGCCCGAAAGAAAACCGTGAAATCCCGCCGCTCGATTATCCGCGTGTGTATCAACTGAAGCGTGACTTTCCGCATCTGACAATGTCGATTAACGGTGGTATCAAGTCGCTGGAAGAGGCCAAAGCACCCCTGCAACACatgg > 1:62480/1‑143 (MQ=255) | CGGTGACGGTGAAAACGCGTATTGGCATCGACGACCAGGACAGCTATGAATTTCTCTGCGATTTCATCAATACCGTTTCCGGCAAAGGCGAGTGTGAGATGTTCATCATCCACGCACGTAAAGCCTGGCTTTCGGGGTTAAGCCCGAAAGAAAACCGTGAAATCCCGCCGCTCGATTATCCGCGTGTGTATCAACTGAAGCGTGACTTTCCGCATCTGACAATGTCGATTAACGGTGGTATCAAGTCGCTGGAAGAGGCCAAAGCACACCTGCAACATATGG > NC_000913/4262114‑4262395 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |