| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,356,445 | A→T | 5.1% | intergenic (‑34/+25) | dtpC ← / ← cadA | dipeptide/tripeptide:H(+) symporter DtpC/lysine decarboxylase 1 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,356,445 | 0 | A | T | 5.1% | 383.4 / 9.5 | 139 | intergenic (‑34/+25) | dtpC/cadA | dipeptide/tripeptide:H(+) symporter DtpC/lysine decarboxylase 1 |
| Reads supporting (aligned to +/- strand): ref base A (58/70); new base T (3/4); total (65/74) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.56e-02 | |||||||||||
Only 100 of 142 total aligned reads displayed.
GGTGAGATAGAGAATGAGTAAGGCACGCATGCCGTAAAAACTGAAGTACTCCCAGATTTGGATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAATATCGGTTTCAAAGCCCGGATAGTGAGCGCCGATTTCACACAGCATC > NC_000913/4356304‑4356587 | ggTGAGATAGTGAATGAGTAATGCCTACATGCTGTAAAAAATGAAGTTCTCCCAGATTTGGATCGCCACGATATAGTATTTCGCGCGCGGCTGTGAGTGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCaa < 2:502890/143‑1 (MQ=255)ggTGAGATAGAGAATGAGGAAGCCATGCATGCCGTAAAAACTGAAGTACTCCCAGATTTGGATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCaa < 1:989692/143‑1 (MQ=255) tGAGATGGGGAATGAGCAAGGCACGCATGGCGTAAAACCTGCAGTACTCCCAGATTTGGATCGCCACGATATAGTAGATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGc < 2:153821/143‑1 (MQ=255) tGAGATAGAGAATGAGTAAGGCACGCATGCCGTAAAAACTGAAGTACTCCCAGATTTGGATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAGAGGGAAGTGGCAAGc > 2:358263/1‑143 (MQ=255) agaTAGAAAATGAGAAATGCACGAATGACGTAAAAACTGAAGTACTCCAAGATAGGGATCGCCACGATACACTAGATCCCGCGCGGCTGTGAGTGTGTTTTCATGTGTTCTAAAAAAAAAAAAAAAAGGGAAGTGGCAAGCCa < 2:105708/143‑1 (MQ=255) tAGAGAATGAGTAAGGCACGCATGCCGTAAAAACTGAAGTACTCCCAGATTTGGATCGCCACGATATAGTATATCGCGCGCCGCTGTCAGGGTGCTTTCATTTGTTCTCCTTATGAGCAAATCAGCGCTGTGGCAACCCACtt > 1:262403/1‑143 (MQ=255) agagAATGAGTAAGGCACGCATGCCGTAAAAACTGAAGTACTCCCAGATTTGGATCGCCACGTTATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCTTGCCACTTc < 1:641987/143‑1 (MQ=255) agagAATGAGTAAGGCACGCATGCCGTAAAAACTGAAGTACTCCCAGATTTGGATCGCCACGATATAGCATAGCGCGCGCGGCAGCGGCGGTGTTCTCATGCGTTCTCCTTATCCGCAAAACCGGGCAGTGTCGAGcccgtgc > 2:370234/1‑138 (MQ=255) gagaATGCGTATGGCACGCTTGCCTTAAAATCTGCAGTACTCGCGGATTTGGTTCTCCACGATATAGTATCTCTCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTcc < 2:437209/143‑1 (MQ=255) gagaATGAGTAAGGCACGCATGCCGTAAAAACTGAAGTACTCCCAGATTTGGATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCTTGCCACTTcc < 1:254785/143‑1 (MQ=255) agaATGAGTAAGGCACGCATGCCGTAAAAACTGAAGTACTCCCAGATTTGGATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTccc < 1:388822/143‑1 (MQ=255) aaTGAGTAAGGCACGCATGCCGTAAAAACTGAAGTACTCCCAGATTTGGATCGCCACGATATAGTATATCGCGCGCCGCTGTGTGGGTGTTTTCATGTGTTCTCCTTTTGATCAAAAACGGTCAGTGGCAAGCCACCTCCCtc > 1:670316/1‑142 (MQ=255) aaTGAGTAAGGCACGCAGGCCGTAAAAACTGAAGTACTCACAGACTTGTAGCGCCACGATATAGTATATCTCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCtt < 2:760764/143‑1 (MQ=255) gAGTAAGGCACGCATGCCGTAAAAACTGAAGTACTCCCAGATTTGGATCGCCACGATCTCGGATATCGCGCGCGGATGTGAGGGTGGTTTCCGGTGTTCTCCCTATGAGCAAAGAAGGGAAGGGGCGAGCCCCTTCCCGTgga > 2:843131/1‑141 (MQ=255) aGTAAGGCTGCCGTGCGGTAAAAGCTGATGTACTCCCAGATTTGGCTCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCCTGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTAc < 2:697626/143‑1 (MQ=255) tAAGGCACGCATGCCGTAAAAACTGAAGTACTCCCAGATTTGGATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAACAGGGAAGTGGCAAGCCACTTCCCTTGTACGa > 2:661997/1‑143 (MQ=255) tAAGGCACGCATGCCGTAAAAACTGAAGTACTCCCAGATTTGGATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCACGTGATCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCACCTGTACGa > 2:1017132/1‑143 (MQ=255) aGGCACGCATGCCGTAAAAAGTGAAGTACTCCCGGATGTGGATCGCCACGATATAGTATAGCGCGCGCGGCTGTGGGGGTGTTTTCATGTGTTCTACAAAAAAGAAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGc < 2:173982/143‑1 (MQ=255) aGGCACGCATGCCGTAAAAACTGAAGTACTCCCAGATTTGGATCGCCACGATATAGTATATCGCGCGCGGCCGTGAGCGTGTTTTCATGTGATCTCCTTATGAGCAAAAAATGGAAATGGCAAGACAGTTCAGTGGTACGAGc > 1:359530/1‑143 (MQ=255) cACGCATGCCGTAAAAACTGAAGTACTCCCAGATTTGGATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGTAAGCCACTTCCCTTGTACGAGCTaa < 1:846061/143‑1 (MQ=255) tGCCGTAAAAACTGAAGTACTCCCAGATTTGGATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTAATGTGTTCTCCTTATGAGCAAAATAGTGTAGTGGCTATCCACTTCACTTGTACTCGCTAACTAttt > 1:870632/1‑143 (MQ=255) tGCCGGAAAAACTGAAGTACTCCCAGATTTGGATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTAttt < 1:1202009/143‑1 (MQ=255) gCCGTAAAAACTGAAGTCCACCCCAATTTGTGTCGAAGTGAAAAAGGATATTGCGCGCGGCTGTGAGGGTGTTTTTATGGGTTCTCCTTATGAGCAAAAAAGGGAAATGGCAAGCCACTTCCCTTGTACGAGCTAATTAtttt < 1:286629/143‑1 (MQ=255) cGTAAAAGCGGGAGTACGCCAAGATGTGGATCGACACGATATGGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCCCCTTATGAGGAAAAGTGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTAtttttt < 2:912922/143‑1 (MQ=255) cGTAAAAACTGAAGTACTCCCAGATTTGGATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGCGTGTTTTCCTGTGTTCTCCTTATGAGCAAACAAGGGAAGTGGCAAGCCACTTCACTTGTACGAGCTAATTAttttgt > 2:103026/1‑141 (MQ=255) gTAAAAACTGAAGTACTCCCAGATTTGGATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGACAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTg < 1:1067157/143‑1 (MQ=255) aaaCTGAAGTACTCCCAGATTTGGATCGCCACGATATAGTATATCGCGCGCGGCAGTGAGGGTGATTACATGCGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCgtt > 1:490130/1‑143 (MQ=255) accTGAAGTACTCCCAGAGTTGGATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTttc < 2:297510/141‑1 (MQ=255) gAAGTGCTCCCAGAGTTGGATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTtcttct < 1:753060/143‑1 (MQ=255) aaGTACTCCCAGATTTGGATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTcttctt > 2:54624/1‑143 (MQ=255) gcggccAGATTGTGATCGCCTAGATAGTGTATATCGCGCGCGGCTGTGAGGGTGTTTTCGTGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCaa < 2:370087/139‑1 (MQ=255) aCTCCCAGATTTGGATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCaa < 2:942477/143‑1 (MQ=255) aCTCCCAGATTTGGATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCCACTTATGAGCCAAAAAGGGAAGTGGCGAGCCACTTCCCCTGTACGAGATAACTACTTTTTGCTCtcttctcccca > 2:680582/1‑138 (MQ=255) tCCCAGATTTGGATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATa > 2:33153/1‑143 (MQ=255) tCCCAGATTTGGATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTCTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATa < 1:61219/143‑1 (MQ=255) ccAGATTTGGATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCCATAcc > 2:862490/1‑143 (MQ=255) ccAGATTTGGATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTACAAGTGATCTCCTTAGGAGCAAAAAAGGGCAGGGGCAAGGCACTTTACTTGTTCGGGCTAATTATTTTTTGCTTTATTATTTCAATAcc > 1:76040/1‑143 (MQ=255) ccAGATTTGGATCGCCACGATATAGTATATCGCGCGCGGCTGTCAGGGTGTTATCATGTGTTCTCCTTATGAGCAAAACAGGGAAGTGGCAAGCCACTTCCCTTGTACGATCTAATTATTTTTTGCTTCCTTCTCCCACTAcc > 1:605849/1‑143 (MQ=255) ccAGATGTGGATCGTCACGATATAGTATCGCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATAcc < 2:1205414/143‑1 (MQ=255) gATTTGGATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAGGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTa < 1:666767/143‑1 (MQ=255) ggttCGCCACGGTATAGTTTATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGt < 2:410670/140‑1 (MQ=255) tCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGGGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGtata > 1:496592/1‑143 (MQ=255) cACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGaataaagg > 1:984276/1‑139 (MQ=255) cACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTGCTCCTTATGACCAAAAAAGCGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTCCTTCTTTCCATACCTTACCGGTATACCgc > 1:596183/1‑142 (MQ=255) tataGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGCGGCAAGCCCCTTCCCTTGTACGAGCTAATTCTTTTTTGCTTTCTTATTTCAATACCTTAACGGTGTAGcacacatc > 2:299237/1‑136 (MQ=255) ataGTATATCGCGCGGGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCa < 1:853626/143‑1 (MQ=255) atatCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTg < 1:852649/143‑1 (MQ=255) atCGGGCGCGGCTGTGAGGGTGTTTTCATTTGTTCTCCATATGAGAAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGAc < 2:870575/143‑1 (MQ=255) agcgcgcgcgGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGAc < 2:868988/141‑1 (MQ=255) tCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACg > 2:27778/1‑143 (MQ=255) tCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACg > 1:763537/1‑143 (MQ=255) tCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCGCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACg < 2:1093580/143‑1 (MQ=255) cgcaGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATg < 2:467968/143‑1 (MQ=255) gcgGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGAAAGCCACGAGCCTTGTACGAGCTAATTATTTTTTGCGTTCTTCTTTCAATACCTTAACGGTATCGCGCCCGTGACCCTGACAGTATgg > 1:806988/1‑142 (MQ=255) cTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCg < 2:119417/143‑1 (MQ=255) aGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAat < 1:9246/143‑1 (MQ=255) aGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAat < 2:707784/143‑1 (MQ=255) aGGGTGTTCTCATGTGTTCTCGTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAat < 1:1071975/143‑1 (MQ=255) tgtTTTCATGTGTTCTCCTTATGAGCAAAAAAGGTAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAATATCg < 2:286168/143‑1 (MQ=255) gtTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAATATCgg < 1:126896/143‑1 (MQ=255) ttttCATGTGTTCTCCTTATGAGTAAAAAAGTGAAGTGGCAAGCCACCTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAATATCGGt < 2:726619/143‑1 (MQ=255) ttttCATGTGTTCTCCTTATGAGCAAAAAAGGGGAGTGGCAAGCCACCTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAATATCGGt < 1:650994/143‑1 (MQ=255) ttttCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTGTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAATATCGGt > 2:619750/1‑143 (MQ=255) ttttCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAATATCGGt > 2:1087120/1‑143 (MQ=255) ttttCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAATATCGGt < 1:33153/143‑1 (MQ=255) ttgccATGCGTCCTCCATATGAGCAAAAAAGGGAAGTTGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAATATCGGt < 1:262575/139‑1 (MQ=255) ttCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAATATCGGttt > 1:330101/1‑143 (MQ=255) aTGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGAGTCCATCAGCCTGACGGTATGCACCGTGAATATCGGTTGCaa > 2:1240843/1‑143 (MQ=255) tgtgTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCACCTGTACGAGCTAATGATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAATATCGGTTTCaaa < 1:588277/143‑1 (MQ=255) gctctcCCGATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAAGAGCGGTTTCAAAGcc > 2:220680/3‑143 (MQ=255) ttCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAATATCGGTTTCAAAGccc > 1:731145/1‑143 (MQ=255) ttCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTGTGCTGTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGAGAAGATCGGCTTCAAAGccc > 2:543315/1‑143 (MQ=255) tctcCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTATCGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAATATCGGTTTCAAAGCCCg < 2:764186/143‑1 (MQ=255) ctcCTTATGAGCAAAAAAGGGAAAACGCCAGTAACGCGTCAGGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTCACGGTATCGCGGCCATCATCCTGACGGTATGCACCCAGAATAGCGGTTTCAACGGCCgc > 2:1049552/1‑142 (MQ=255) tcCTTATGCGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTCCCACACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAATATCGGTTTCAAAGCCCGGa < 1:946966/143‑1 (MQ=255) tcCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGCGCTAATTATTTTTTGCTTTCTGCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAATATCGGTTTCAAAGCCCGGa < 1:237540/143‑1 (MQ=255) tcCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAATATCGGTTTCAAAGCCCGGa > 2:346796/1‑143 (MQ=255) cTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAATATCGGTTTCAAAGCCCGGATa < 1:633704/143‑1 (MQ=255) tATGAGCCAAACAGGGACGGGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCGTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAATATCGGTTTCAAAGCCCGGATAGt < 2:319580/143‑1 (MQ=255) tATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAATATCGGTTTCAAAGCCCGGATAGt < 1:54624/143‑1 (MQ=255) tGAGCAAAACAGGGAAGTGGCAAGCCCCTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAGCGGTATAGCGGCCATCATCCTGACTGTATGCACCGTGAATATCGGTTTCAAAGCCCGGATAGTGa < 1:1183661/143‑1 (MQ=255) ggAGCAGGAAAGGGAAGTCGCAAGCGACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATGCCTTAACGGGATAGCGGCCATCAGCCTGACGGTATGCACCGTGAATATCGGTTTCAAAGCCCGGATAGTGa < 2:841429/142‑1 (MQ=255) gAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAATATCGGTTTCAAAGCCCGGATAGTGAg > 2:534758/1‑143 (MQ=255) gAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTATTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAATATCGGTTTCAAAGCCCGGATGGTGAg > 1:960111/1‑143 (MQ=255) gCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAATATCGGTTTCAAAGCCCGGATAGTGAgcg > 1:1174296/1‑143 (MQ=255) cAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGCCGGTATGCACCGTGAATATCGGTTTCAACGCCCGGCCAGTgcgcgc > 2:614322/1‑143 (MQ=255) cAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAATATCGGTTTCACAGCCCGGATAGTGAgcgc > 1:763451/1‑143 (MQ=255) aaGGGAAGTGGCTTGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTGCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGGATATCGGTTTCAAAGCCCGGGTAGTGAGCGCGGAtt > 1:818645/1‑143 (MQ=255) gggAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAATATCGGTTTCAAAGCCCGGATAGTGAGCGCCGATTTc < 1:994117/143‑1 (MQ=255) ggAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAATATCGGTTTCAAAGCCCGGATAGTGAGCGCCGATTTca > 1:1229900/1‑143 (MQ=255) ggAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAATATCGGTTTCAAAGCCCGGATAGTGAGCGCCGATTTca < 1:620473/143‑1 (MQ=255) ggAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACAGTGAATATCGGTTGCAAAGCCCGGATAGTGAGCGCCGATTTca < 1:456715/143‑1 (MQ=255) gAAGTGGCTTGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAATATCGGTTTCAAAGCCCGGATAGTGAGCGCCGATTTcac > 1:426892/1‑143 (MQ=255) gAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAATATCGGTTTCAAAGCCCGGATAGTGAGCGCCGATTTcac > 1:1149786/1‑143 (MQ=255) gAAGTGGCAAGCCACTTCCCCTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAATATCGGTTTCAAAGCCCGGATAGTGAGCGCCGATTTcac > 1:9585/1‑143 (MQ=255) gagcggCATGCCAATTCACTTGTACGGGCCAGTTATTTTCTGCTGTCTTCTTTCACTGCCTTGACGGTATAGCGGCGATCACGGTGACGGTATGCACCGTGAATATCGGTTTCAAAGCCCGGATAGTGAGCGCCGATTTcaca < 2:49877/139‑1 (MQ=255) aaGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAATATCGGTTTCAAAGCCCGGATAGTGAGCGCCGATTTcaca < 1:1193867/143‑1 (MQ=255) gCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAATATCGGTTTCAAAGCCCGGATAGTGAGCGCCGATTTCACACAGCa > 1:441620/1‑143 (MQ=255) cAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGCGAATATCGGTTTCAAAGCCCGGATAGTGAGCGCCGATTTCACACAGCAt > 1:648273/1‑143 (MQ=255) aaGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAATATCGGTTTCAAAGCCCGGATAGTGAGCGCCGATTTCACACAGCATc < 1:1240843/143‑1 (MQ=255) | GGTGAGATAGAGAATGAGTAAGGCACGCATGCCGTAAAAACTGAAGTACTCCCAGATTTGGATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAATATCGGTTTCAAAGCCCGGATAGTGAGCGCCGATTTCACACAGCATC > NC_000913/4356304‑4356587 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |