| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,422,903 | T→C | 5.7% | C20R (TGC→CGC) | ulaE → | L‑ribulose‑5‑phosphate 3‑epimerase UlaE |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,422,903 | 0 | T | C | 5.7% | 275.4 / 4.6 | 109 | C20R (TGC→CGC) | ulaE | L‑ribulose‑5‑phosphate 3‑epimerase UlaE |
| Reads supporting (aligned to +/- strand): ref base T (54/46); new base C (6/2); total (60/49) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.96e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.57e-01 | |||||||||||
Only 100 of 111 total aligned reads displayed.
GTATCCGTGATGCCGCTTCTCCGGTGGAAGCCGCACGTCAGTTCAAACGTTCCATCGCTGAACTGTGGGGCTAAGGAGCGGATATGTTGTCCAAACAAATCCCGCTTGGCATCTATGAAAAAGCGCTCCCCGCCGGGGAGTGCTGGCTGGAACGCCTGCAACTGGCAAAAACGTTAGGCTTCGATTTTGTCGAAATGTCGGTAGATGAAACTGACGATCGCCTGTCGCGCCTCAACTGGAGCCGCGAGCAGCGTCTGGCGCTGGTCAATGCGATTGTTGAAAC > NC_000913/4422763‑4423045 | gtaGCCGTGATGCCGCTTCTCCGGTGGAAGCCGCACGTCAGTTCAAACGTTCCATCGCTGAACTGTGGGGCTAAGGAGCGGATATGTTGTCCAAACAAATCCCGCTTGGCATCTATGAAAAAGCACTCCCCGGCGGGGAgcgc < 1:814217/143‑1 (MQ=255) agccGTGGTCCGGCCTCTCCGGTGGAAGCCGCACTTCAGTTCAATCGTTCCACCGCTGAACTGTGGGGCTCAGGAGCGGATATGTTGTCCAAACAAATACCGCTTGGCATCTATGCAACAGCGCTCCCCGCCGGGGAGTgctg < 2:1261211/141‑1 (MQ=255) tCCGTGATGCCGCTTCTCCGGTGGAAGCCGCACGTCAGTTCAAACGTTCCATCGCTGAACTGTGGGGCTAAGGAGCGGATATGTTGTCCAAACAAATCCCGCTTGGCATCTATGAAAAAGCGCTCCCCGCCGGGGAGTgctgg > 2:838911/1‑143 (MQ=255) cGTGATGCCGCTTCTCCGGTGGAAGCCGCACGTCAGTTCAAACGTTCCATCGCTGAACTGTGGGGCTAAGGAGCGGATATGTTGTCCAAACAAATCCCGCTTGGCATCTCTGAAAAAGCGCTCCCCGCCGGGGAGTgctggct > 1:1035360/1‑143 (MQ=255) tgctGCCGCTTCTCCGGTGGCTGGCGCACGTCAGTTCAAACGTTCCATCGCTGAACTGTGGGGCTAAGGAGCGGATATGTTGTCCAAACACATCCCGCTTGGCATCTATGAAAAAGCGCTCCCCGCCGGGGAGTGctggctgg < 2:830199/140‑1 (MQ=255) ccGCTTCTCCGGTGGAAGCCGCACGTCAGTTCAAACGTTCCATCGCTGAACTGTGGGGCTAAGGTGCGGATATGTTGTCCAAACAAATCCCGCTTGGCATCTATGAAAAAGCGCTCCCCGCCGGGGAGTGCTGGCTGGAACGc < 1:987742/143‑1 (MQ=255) cGCTTCTCCGGTGGAAGCCGCACGTTAGTTCAAACGTTCCATCGCTGAACTGTGGGGCTAAGGAGCGGATATGTTGTCCAAACAAATCCCGCTTGGCATCCATGACAAAGCGCTCCGCGCCGGGGAGTGCGGGGTGGAAAGcg > 2:424951/1‑142 (MQ=255) gCTTCTCCGGTGGAAGCCGCACGTCAGTTCAAACGTTCCATCGCTGAACTGTGGGGCTAAGGAGCGGATATGTTGTCCAAACAAATCCCGCTTGGCATCTATGAAAAAGCGCTCCCCGCCGGGGAGTGCTGGCTGGAACGCCt > 2:1126235/1‑143 (MQ=255) cTTCTCCGGTGGAAGCCGCACGTCAGTTCAAACGTTCCATCGCTGAACTGTGGGGCTAAGGCGCGGATATGTTGTCCAAACAAATCCCGCTTGGCATCTATGAAAAAGCGCTCCCCGCCGGGGAGTGCTGGCTGGAACGCCTg < 2:471607/143‑1 (MQ=255) gtctcGGGTGGAAGCCGCACGTCAGTTCAAACGTTCCATCGCTGAACTGCGGGGCTAAGGAGCGGATATGTTGTCCGAACAAATCCCGCTTGGCATCTATGAATAAGCGCTCTCCGCTGTGTAGTGCTGGCTGGAGCGCCtac < 2:1060641/142‑3 (MQ=255) tcCGGTGGAAGCCGCACGTCAGTTCAAGCGTTCCATCGCTGAACTGTGGGGCTAAGGGGCGGATATGTTGTCCAAACAAATCCCGCTTGGCATCTATGAAAAAGCGCTCCCCGCCGGGGAGTGCTGGCTGGAACGCCTGCAAc < 1:372946/143‑1 (MQ=255) tcCGGTGGAAGCCGCACGTCAGTTCAAACGTTCCATCGCTGAACTGTGGGGCTAAGGAGCGGATATGCTGTCCAAACAAATCCCGCTTGGCATCTATGAAAAAGCGCCCCCCGCCGCGGAGCGCCGGCTGGAACGCCTGCAAc > 1:1168919/1‑143 (MQ=255) cGGTGGAAGCCGCACGTCAGTTCAAACGTTCCATCGCTGAACTGTGGGGCTAAGGAGCGGATATGTTGTCCAAACAAATCCCGCTTGGCATCTATGAAAAAGCGCTCCCCGCCGGGGAGTGCTGGCTGGAACGCCTGCAACTg > 1:704397/1‑143 (MQ=255) cGGTGGAAGCCGCACGTCAGTTCAAACGTTCCATCGCTGAACTGTGGGGCTAAGGAGCGGATATGTTGTCCAAACAAATCCCGCTTCGCATCTATGAAAAAGCGCTCCCCGCCGGGGAGTGCTGGCTCGACCGCCTCCaaacg > 2:657926/1‑140 (MQ=255) gggggAAGCCGCACGTCTGTGATCACGTTCCATCGCTGAACTGCGGCGCTCCGCCACCCACAAGTTGAGTTTAGGAATTCCTCGTGGCATCTATGAAAAAGCGCTCCCCGCCGGGGAGTGCTGGCTGGAACGCCTGTAACTgg < 2:907686/140‑1 (MQ=255) gAAGCCGCACGTCAGTTCAAACGTTCCATCGCTGAACTGTGGGGCTAAGGAGCGGATATGTTGTCCAAACAAATCCCGCTTGGCATCTATGAAAAAGCGCTCCCCGCCGGGGAGTGCTGGCTGGAACGCCTGCAACTGGCaaa > 1:135070/1‑143 (MQ=255) gAAGCCGCACGTCAGTTCAAACGTTCCATCGCTGAACTGTGGGGCTAAGGAGCGGATAGGTTGTCCAAACAAATGCGGCTGGGCATCTGTGAAAAAGCGCTCCCCGCCGGGGAGTGCTGGCTGGAACGCCTGCAACTGGCaaa > 2:191649/1‑143 (MQ=255) gCACGTCAGTTCACACCTTCCATCGCTGAACTGTGGGGCTAAGGAGCGGATATGTTGTCCAAACAAATCCCGCTTGGCATCTATGAAAAAGCGCTCCCCGCCGGGGAGTGCTGGCTGGAACGCCTGCAACTGGCAAAAACGtt < 1:8883/143‑1 (MQ=255) aCGTCAGTGCAAACGTCACATCGCTGAACTGTGGGGCTAAGGAGCGGATATGTTGTCCAAACAAATCCCGCTTGGCATCTATGAAAAAGCGCTCCCCGCCGGGGAGTGCTGGCTGGAACGCCTGCAACTGGCAAAAACGTTAg < 2:365872/143‑1 (MQ=255) tCAGTTCAAACGTTCCATCGCTGAACTGTGGGGCTAAGGAGCGGATATGTTGTCCAAACAAATCCCGCTTGGCATCTATGAAAAAGCGCTCCCCGCCGGGGAGTGCTGGCTGGAACGCCTGCAACTGGCAACAACGCTAGGcg > 2:545427/1‑142 (MQ=255) tCAGTTCAAACGTTCCATCGCTGAACTGTGGGGCTAAGGAGCGGATATGTTGTCCAAACAAATCCCGCTTGGCATCTATGAAAAAGCGCTCCCCGCCGGGGAGTGCTGGCTGGAACGCCTGCAACTGGCAAAAACGTTAGGCt > 1:608616/1‑143 (MQ=255) gTTCAAACGTTCCATCGCTGAACTGTGGGGCTAAGGAGCGGATATGTTGTCCAAACAAATCCCGCTTGGCATCTATGAAAAAGCGCTCCCCGCCGGGGAGTGCTGGCTGGAACGCCTGCAACTGGCAAAAACGTTAGGCTTCg > 1:936059/1‑143 (MQ=255) agcGTTCCGTCGCTATACTGTGGAGCTAAGGTGCGGATATGTTGGCCACACAAATCCCGCTTGGCATCTATGAAACAGCGCTCCCCGCCGGGGAGTGCTAGCTGAAACGCCTGCAACTGGCAAAAACGTTAGGCTTCGAtttt < 2:801187/141‑1 (MQ=255) aaCGTTCCATCGCTGAACTGTGGGGCTAAGGAGCGGATATGTTGTCCAAACAAATCCCGCTTGGCATCTATGAAAAAGCGCTCCCCGCCGGGGAGTGCTGGCTGGAACGCCTGCAACTGGCAAACACGTTAGGCTTCGAtttt > 2:839815/1‑143 (MQ=255) aaCGTTCCATCGCTGAACTGTGGGGCTAAGGAGCGGATATGTTGTCCAAACAAATCCCGCTTGGCATCTATGAAAAAGCGCTCCCCGCCGGGGAGTGCTGGCTGGAACGCCTGCAACCGGCAAAAACGATAGGCTTCGActtc > 2:580175/1‑142 (MQ=255) cGTTCCATCGCTGAACTGTGGGGCTAATGAGCGGATATGTTGTCCGAACAAATCCCGCTTGGCATCTATGAAAGAGCGCGCCAGGCCGGGGGCTGCTGGCTGGTACGCCTGCAACTGGCAAAAACGTTAGGCTTCGATTTTGt < 2:167182/143‑1 (MQ=255) gTTCCATCGCTGAACTGTGGGGCTAAGGAGCGGATATGTTGTCCAAACAAATCCCGCTTGGCATCTATGAAAAAGCGCTCCCCGCCGGGGAGTGCTGGCTGGAACGCCTGCAACTGGCAAAAACGTTAGGCTTCGATTTTGTc < 1:1126235/143‑1 (MQ=255) tgcccgcGCTGGACTGCGGGGCTAAGGAGAGATTCCGCTGTCCAAACAAAACCCGCTTGGCATCTGTGAGAAAGGGCTCCCCGCCGGGGAGTGCTGGCTGGAACGCCTGCAACTGGCAAAAACGTTAGGCTTCGAGTTTGTCg < 2:261843/137‑1 (MQ=255) ccATCGCTGAACTGTGGGGCTAAGGAGCGGATATGTTGTCCAAACAAATCCCGCTGGGCACCTATGAAGAAGCGCTCCCCGCCGGGGAGTGCTGGCTGGAACGCCTGCAACTGGCAAAAACGTTAGGCTTCGATTTTGTCGaa < 1:153204/143‑1 (MQ=255) aTCGCTGAACTGTGGGGCTAAGGAGCGGATATGTTGTCCAAACAAATCCCGCTTGGCATCTATGAAAAAGCGCTCCCCGCCGGGGAGTGCTGGCTGGAACGCCTGCAACTGGCAAAAACGTTAGGCTTCGATTTTGTCggagt > 1:1046148/1‑139 (MQ=255) aTCGCTGAACTGTGGGGCTAAGGAGCGGATATGTTGTCCAAACAAATCCCGCTTGGCATCTATGAAAAAGCGCTCCCCGCCGGGGAGTGCTGGCTGGAACGCCTGCAACTGGCAAAAACGTTAGGCTTCGATTTTGTCGAAAt > 2:715948/1‑143 (MQ=255) cTGAACTGTGGGGCTAAGGAGCGGATATGTTGTCCAAACAAATCCCGCTTGGCATCTATGAAAAAGCGCTCCCCGCCGGGGAGTGCTGGCTGGAACGCCTGCAACTGGCAAAAACGTTAGGCTTCGATTTTGTCGAAATGTCg < 1:358187/143‑1 (MQ=255) cTGAACTGTGGGGCTAAGGAGCGGATATGTTGTCCAAACAAATCCCGCTTGGCATCTATGAAAAAGCGCTCCCCGCCGGGGAGTGCTGGCTGGAACGCCTGCAACTGGCAAAAACGCTAGGCTTCGATTTTGTCGAAATGTCg > 2:1132804/1‑143 (MQ=255) cTGAACTGTGGGGCTAAGGAGCGGATATGTTGTCCAAACAAATCCCGCTGGGCATCTATGAAAAAGCGCTCCCCGCCGGGGAGTGCTGGCTGGAACGCCTGCAACTGGCAAAAACGTTAGGCTTCGATTTTGTCGAAATGTCg < 1:986795/143‑1 (MQ=255) tttattgtgGGGGTAAGGAGCCGATATGTTGTCCAAACAAATCCCGCTTGGCATCTATGAAAAAGCGCTCCCCGCCGGGGAGTGCTGGCTGGAACGCCTGCAACTGGCAAAAACGTTAGGCTTCGATTTTGTCGAAATGTCgg < 1:1199089/138‑1 (MQ=255) aaCTGTGGGGCTAAGGAGCGGATATGTTGTCCAAACAAATCCCGCTTGGCATCTATGAAAAAGCGCTCCCCGCCGGGGAGTGCTGGCTAGAACGCCTGCAACTGGCAAAAACGTTAGGCTTCGATTTTGTCGAAATGTCGGTa > 2:1041900/1‑143 (MQ=255) tgtgGGGCTAAGGAGCGGATATGTTGTCCAAACAAATCCCGCTTGGCATCTATGAAAAAGCGCTCCCCGCCGGGGAGTGCTGGCTGGAACGCCTGCAACTGGCAAAAACGTTAGGCTTCGATTTTGTCGAAATGTCGGTAGAt < 2:936059/143‑1 (MQ=255) tgtgGGGCTAAGGAGCGGATATGTTGTCCAAACAAATCCCGCTTGGCATCTATGAAAAAGCGCTCCCCGCCGGGGAGTGCTGGCTGGAACGCCTGCAACTGGCAAAAACGTTAGGCTTCGATTTTGTCGAAATGTCGGTAGAt < 1:365951/143‑1 (MQ=255) ggggCTAAGGAGCGGATATGTTGTCCAAACAAATCCCGCTTGGCATCTATGAAAAAGCGCTCCCCGCCGGGGAGTGCTGGCTGGAACGCCTGCAACTGGCAAAAACGTTAGGCTTCGATTTTGTCGAAATGTCGGTAGTTGat > 1:780190/1‑142 (MQ=255) gggCTAAGGAGCGGATATGTTGTCCAAACAAATCCCGCTTGGCATCTATGAAAAAGCGCTCCCCGCCGGGGAGTGCTGGCTGGAACGCCTGCAACTGGCAAAAACGTTAGGCTTCGATTTTGTCGAAATGTCGGTAGATGaaa < 1:1245230/143‑1 (MQ=255) gggCTAAGGAGCGGATATGTTGTCCAAACAAATCCCGCTTGGCATCTATGAAAAAGCGCTCCCCGCCGGGGAGTGCTGGCTGGAACGACTGCAACTGGCAAAAACGTTAGGCTTCGATTTTGTCGAAATGTCGGTAGATGaaa < 1:955319/143‑1 (MQ=255) ggCTAAGGAGCGGATATGTTGTCCAAACAAATCCCGCTTGGCATCTATGAAAAAGCGCTCCCCGCCGGGGGGTGCTGGCTGGAACGCCTGCAACTGGCAAAAACGTTAGGCTTCGCTTTTGTCGAAATGTCGGTAGATGAGAc > 2:1084814/1‑143 (MQ=255) gggaGGAGCGGGTATGTCGTCCAACCAAATCCCGCTCGGCATCTATGAAAAAGCGCACCCCGCCGGGGAGTGCTGGCTGGAACGCCTGCAACTGGCAAAAACGTTAGGCTTCGATTTTGTCGAAATGTCGGTAGATGAAACTg < 2:1144967/140‑1 (MQ=255) aaGGAGCGGATATGTTGTCCAAACAAATCCCGCTTGGCATCTATGAAAAAGCGCTCCCCGCCGGGGAGTGCTGGCTGGAACGCCTGCAACTGGCAAAAACGTTAGGCTTCGATTTTGTCGAAATGTCGCTAGATGAAACTGAc > 2:950190/1‑143 (MQ=255) tggcgCGTATATGTTGGCCACACAAATCCCGCTTGTCATCTATGAAAAAGCGCTCCCCGCCGGGGAGTGCTGGCTGGAACGCCTGCAACTGGCAAAAACGTTAGGCTTCGATTTTGTCGAAATGTCGGTAGATGAAACTGACg < 2:674357/139‑1 (MQ=255) ggAGCGGATATGTTGTCCAAACAAATCCCGCTTGGCATCTATGAAAAAGCGCTCCCCGCCGGGGAGTGCTGGCTGGAACGCCTGCAACTGGCAAAAACGTTAGGCTTCGATTTTGTCGAAATGTCGGGAGATGAAACTGACGa > 2:121590/1‑143 (MQ=255) gAGCGGATATGTTGTCCAACCAAATCCCGCTTCGCATCTATGAAAAAGCGCTCCCCGCCGGCGAGTGCTGGCTGGACCGCCTGCAACTGGCAAAAACGTTAGGCTTCGATTTTGTCGAAATGTCGGTAGATGAAACTGACGAt < 1:106920/143‑1 (MQ=255) gCGGATATGTTGTCCAAACAAATCCCGCTTGGCATCTATGAAAAAGCGCTCCCCGCCGGGGAGTGCTGGCTGGCACGCCTGCAACTGGCAAAAACGTTAGGCTTCGATTAGGTCGAACTGTCGGTAGATGAAACTGACGATCg > 2:142399/1‑143 (MQ=255) gtgttgtCCAAAGCAATCCCGCTTGGCATCTTTGAAACAGCGTTCCCCGCCGGGGAGTGCTGGCTGGATCGCCTGCGACTGGCAAACGCGTTAGGTTTCGATTTTGTCGAAATGTCGGTAGATGAAACTGACGATCGCCTGTc < 2:611204/142‑1 (MQ=255) tgttgtCCAAGCAAACCCCGCGTGGCACCTATGAAAAAGCGCTCCCCGCCGGGGAGTGCTGGCTGGAACGCCTGCAACTGGCAAAACCGTTAGGCTTCGATTTTGTCGAAATGTCGGTAGATGAAACTGACGATCGCCTGTcg < 1:52574/143‑1 (MQ=255) tgttgtCCAAACAAATCCCGCTTGGCATCTATGAAAAAGCGCTCCCCGCCGGGGAGTGCTGGCTGGAACGCCTGCAACTGGCAAAAACGTTAGGCTTCGATTTTGTCGAAATGTCGGTAGATGAAACTGACGATCGCTTGTcg > 1:1080606/1‑143 (MQ=255) ttgtCCAAACAAATCCCGCTTGGCATCTATGAAAAAGCGCTCCCCGCCGGGGAGTGCTGGCTGGAACGCCTGCAACTGGCAAAAACGTTAGGCTTCGATTTTGTCGAAATGTCGGTGGGTGAAACTGACGATCGCCTGCcgcg > 1:240984/1‑143 (MQ=255) cgtCCAAACAAATCCCGCTTGGCATCTATGAAAAAGCGCTCCCCGCCGGGGAGTGCTGGCTGGAACGCCTGCAACTGGCAAAAACGTTAGGCTTCGATTTTGTCGAAATGTCGGTAGATGAAACTGACGATCGCCTGTCgcgc < 1:383178/142‑1 (MQ=255) gtCCAAACAAATCCCGCTTGGCATCTATGAAAAAGCGCTCCCCGCCGAGGAGTGCTGGCTGGAACGCCTGCAACTGGCAAAAACGTTAGGCTTCGATTTTGTCGAAATGTCGGTAGATGAAACTGACGATCGCCTGtagtgtg > 1:579888/1‑137 (MQ=255) tCCAAACAAATCCCGCTTGGCATCTATGAAAAAGCGCTCCCCGCCGGGGAGTGCTGGCTGGAACGCCTGCAACTGGCAAAAACGTTAGGCTTCGATGTTGTCGAAATGTCGGTAGATGAAACTGACGATCGCCTGTCCCGCCt > 2:755386/1‑143 (MQ=255) ccAAACAAATCCCGCTTGGCATCTATGAAAAAGCGCTCCCCGCCGGGGAGTGCTGGCTGGAACGCCTGCAACTGGCAAAAACGTTAGGCTTCGATTTTGTCGAAATGTCGGTAGATGAAACTGACGATCGCCTGTCGCGCCTc > 1:482619/1‑143 (MQ=255) aaacaaaTCCCGCTTGGCATCTATGAAAAAGCGCTCCCCGCCGGGGAGTGCTGGCTGGAACGCCTGCAACTGGCAAAAACGTTAGGCTTCGATTTTGTCGAAATGTCGGTAGATGAACCAGAAGATTGCCTGTCGCGCCTcca > 2:828952/1‑141 (MQ=255) aaacaaaTCCCGCTTGGCATCTATGAAAAAGCGCTCCCCGCCGGGGAGTGCTGGCTGGAACGCCAGCAACTGGCAAAAACGTTAGGCTTCGATTTTGTCGAAATGTCGGTAGATGAAACTTGCCATCGCCTGTCGCGCCTCaa > 2:830443/1‑143 (MQ=255) aacaaaTCCCGCTTGGCATCTATGAAAAAGCGCTCCCCGCCGGGGAGTGCTGGCTGGAACGCCTGCAACTGGCAAAAACGTTAGGCTTCGATTTTGTCGAAATGTCGGTAGATGAAACTGACGATCGCCTGTCGCGCCTCAAc > 1:32830/1‑143 (MQ=255) tCCCGCTCGGCCTCTATGACACAGCGCTCCCCGCCGGCGCGTGCTGGCTCGATCCCCTGCAACTGGCAAGACCGGTAGGCTTCGATTTGGTCGAGATGTCGGTAGATGAAACTGACGATCGCCTGTCGCGCCTCAACTGGAGc < 2:315723/143‑1 (MQ=255) tCCAGCCTGGCACCTGTGCAACAGCGCTCCCCGCCGCGGAGTGCTGGCTGGAACGCCTGCAACTGGCAAGAACGTTACGCTTCGATCTTGTCGAAATGTCGGTAGATGAGACTGACGATCGCCTGTCGCGCCTCAACTGGAGc < 2:304736/143‑1 (MQ=255) cgcgTGGCATCTATGAAAACGCGCTCCCCCCCGGGGAGTGCTGGCTGGAACGCCTGCAACTGGCAAAAACGTTAGGCTTCGACTTTGTCGAAATGTCGGTAGATGAAACTGACGATCGCCTGTCGCGCCTCAACTGGAGCcgc < 1:667904/143‑1 (MQ=255) cGCTTGGCATCTATGAAAAAGCGCTCCCCGCCGGGGAGTGCTGGCTGGAACGCCTGCAACTGGCAAAAACGTTAGGCTTCGATTTTGTCGAAATGTCGGTAGATGAAACTGACGATCGCCTGTCGCGCCTCAACTGGAGCcgc > 2:97939/1‑143 (MQ=255) cGCTTGGCATCTATGAAAAAGCGCTCCCCGCCGGGGAGTGCTGGCTGGAACGCCTGCAACTGGCAAAAACGTTAGGCTTCGATTTTGTCGAAATGTCGGTAGATGAAACTGACGATCGCCTGTCGCGCCTCAACTGGAGCcgc < 1:1002569/143‑1 (MQ=255) cGCTTGGCATCTATGAAAAAGCGCTCCCCGCCGAGGAGTGCTGGCTGGAACGCCTGCAACTGGCAAAAACGTTAGGCTTCGATTTAGACGAAATGTCGGTAGAGGAAACTGAGGATCGCCTTTCGCCCCTCAACTGGGGCagc > 2:970702/1‑143 (MQ=255) cTTGGCCTCTATCAAAAAGCGCTCCCCGCCGGGGAGTGCTGGCTGGAACGCCTGCAACTGGCAAAAACGTTAGGCTTCGATTTTGTCGAAATGTCGGTAGATGAAACTGACGATCGCCTGTCGCGCCTCAACTGGAGCCGCGa < 1:254409/143‑1 (MQ=255) ttGGCATCTATGAAAACGCGCTCCCCGCCGGGGAGTGCTGGCTGGAACGCCTGCAACTGGCAAAAACGTTAGGCTTCGATTTTGTCGAAATGTCGGTAGATGAAACTGACGATCGCCTGTCGCGCCTCAACTGGAGCCGCGag < 1:1081613/143‑1 (MQ=255) ctcgCATCTCTGAACTGGCGCCCCCCGCCGGGGAGTGCGTGCTGGAACCCCTGCAACCGGCAAAAAGGTTAGGCTGCGATTTTGTCGAAATGTCGGTAGATGAAACTCCCGTTCGCCTCTCGCGCCTCAACTGGAGCcgcggg < 2:1186314/140‑3 (MQ=255) ggCATCTATGAAAAAGCGCTCCCCGCCGGGGAGTGCTGGCTGGAACGCCTGCAACTGGCAAAAACGTTAGGCTTCGATTTTGTCGAAATGTCGGTAGATGAAACTGACGATCGCCTGTCGCGCCTCAACTGGAGCCGCGagca < 1:715948/143‑1 (MQ=255) aTCTATGAAAAAGCGCTCCCCGCCGGGGAGTGCTGGCTGGAACGCCTGCAACTGGCAAAAACGTTAGGCTTCGATTTTGTCGAAATGTCGGTAGATGAAACTGACGATCGCCTGTCGCGCCTCAACTGGAGCCGCGAGCAGCg > 1:1131827/1‑143 (MQ=255) tCTATGAAAAAGCGCTCCCCGCCGGGGAGTGCTGGCTGGAACGCCTGCAACTGGCAAAAACGTTAGGCTTCGATTTTGTCGAAATGTCGGTAGATGAAACTGACGCTCGCCTGTCGCGCCTCCACTGGAGCCGCGAGCAGCGt > 1:657572/1‑143 (MQ=255) tATGAAAAAGCGCTCCCCGCCGGGGAGTGCTGGCTGGAACGCCTGCAACTGGCAAAAACGTTAGGCTTCGATTTTGTCGAAATGTCGGTAGATGAAACTGACGATCGCCTGTCGCGCCTCACCCGAAGCCGCGCGCAGCGTCt > 2:58924/1‑143 (MQ=255) aTGAAAAAGCGCTCCCCGCCGTGGCGTGCTGGCTGGAACGCCTGCAACTGGCAAAAACGTTAGGCTGCGATTTTGCCGAAATGTCGGTAGATGAAACTGACGATCGCCTGTCGCGCCTCAACTGGAGCCGCGAGCAGCGCCtt < 2:333053/143‑2 (MQ=255) aTGAAAAAGCGCTCCCCGCCGGGGAGTGCTGGCTGGAACGCCTGCAACTGGCAAAAACGTTAGGCTTCGATTTTGTCGAAATGTCGGTAGATGAAACTGACGATCGCCTGTCGCGCCTCAACTGGAGCCGCGAGCAGCGTCTg > 2:191792/1‑143 (MQ=255) aTGAAAAAGCGCTCCCCGCCGGGGAGTGCTGGCTGGAACGCCTGCAACTGGCAAAAACGGTAGGCTTCGACTTTGTCGAAATGTCGGTAGATGAAACTGACGATCGCCTGTCGCGCCTCACGTGGAGCCGCGAGCAGCGTCTg > 2:1114177/1‑143 (MQ=255) tGAAAAAGCGCTCCCCGCCGGGGAGTGCTGGCTGGAACGCCTGCAACTGGCAAAAACGTTAGGCTTCGATTTTGTCGAAATGTCGGTAGATGAAACTGACGATCGCCTGTCGCGCCTCAACTGGAGCCGCGAGCAGCGTCTgg > 1:373294/1‑143 (MQ=255) gAAAAAGCGCTCCCCGCCGGGGAGTGCTGGCTGGAACGCCTGCAACTGGCAAAAACGTTAGGCTTCGATTTTGTCGAAATGTCGGTAGATGAAACTGACGATCGCCTGTCGCGCCTCAACTGGAGCCGCGAGCAGCGTCTGgc > 1:287812/1‑143 (MQ=255) gAAAAAGCGCTCCCCGCCGGGGAGTGCTGGCTGGAACGCCTGCAACTGGCAAAAACGTTAGGCTTCGATTTTGTCGAAATGTCGGTAGATGAAACTGACGATCGCCTGTCGCGCCCCAACTGGAGCCGCAACCCGCGTCTGgc > 2:427533/1‑143 (MQ=255) gccagcacTCCCCGGCGGGGAGTGCTGGCTGGAACGCCTGCAACTCGATGAACCGCTAGGCTTCGCTCCTGTCGCAACGTCGGTAGATGAAACTGACGATCGCCTGTCCCCCCTCACCTCGAGCCGCGAGCCGCCACTGgcgc > 2:572380/8‑143 (MQ=255) aaaaGCGCTCCCCGCCGGGGAGTGCTGGCTGGAACGCCTGCAACTGGCAAAAACGTTAGGCTTCGATTTTGTCGAAATGTCGGTAGATGAAACTGACGATCGCCTGTCGCGCCTCAACTGGAGCCGCGAGCAGCGTCTGgcgc > 1:345231/1‑143 (MQ=255) ccagcacTCCCCGGCGGGGAGCGCTGGCTGGAACGCCTGCAACTGGCAAAAACGTTAGGCTTCGATTTTGTCGAAATGTCGGTAGATGAAACTGACGATCGCCTGTCGCGCCTCAACTGGAGCCGCGAGCCGCGTCTGgcgcc > 1:859343/7‑142 (MQ=255) ccagcacTCCCCGGCGGGGAGCGCTGGCTGGAACGCCTGCAACTGGCAAAAACGTTAGGCTTCGATTTTGTCGAAATGTCGGTAGATGAAACTGACGATCGCCTGTCGCGCCTCAACTGGAGCCGCGAGCAGCGGCTGgcgcg > 1:859347/7‑142 (MQ=255) tggggcTCCCCGCGGGGGAGTGCTGGCTGGAACGCCTGCAACTGGCAAAAACGTTAGGCTTCGATTTTGTCCAAACGTCGGTAGATGAACCTGACGATCGCCTGTCGCGCCTCAACTGGAGCCGCGAGCAGCGTCTGGCGCTg < 2:1127606/139‑1 (MQ=255) gagggcaccccGTCGGGGAGTGCTCGCTGGAACGCTTGCATCTGGCATATCAGTTCGGCTTTGATTTTGTCTAAATGTCGGTAGATGAAACTGACGTCTGGTTTTCGCGCCTCTTCTTCATTCGCGAGCAGCGTATGGCGCTg < 2:22931/136‑1 (MQ=255) cagcacTCCCCGGCGGGGAGCGCTGGCTGGAACGCCTGCAACTGGCAAAAACGTTAGGCTTCGATTTTGCCGACACGCCGGTCGATGCAACTGACGAGCGCCTGTCGCGCCACAACAGCAGACGCGAGCAGCGACAGGCGCTg > 1:394746/6‑143 (MQ=255) aGCACTCCCCGGCGGGGAGTGCTGGCTGGAACGCCTGCAACTGGCAAAAACGTTAGGCTTCGATTTTGTCGAAATGTCGGTAGATGAAACTGACGATCGCCTGTCGCGCCTCAACTGGAGCCGCGAGCAGCGTCTGGCGCTgg > 1:898568/1‑143 (MQ=255) aGCACTCCCCGGCGGGGAGCGCTGGCTGGAACGCCTGCAACTGGCAAAAACGTTAGGCTTCGATTTTGTCGAAATGTCGGTAGATGAAACTGACGATCGCCTGTCGCGCCTCAACTGGAGCCGCGAGCAGCGACTGgcgcacg > 2:891442/1‑140 (MQ=255) cgcTCCCCGCCGGGGAGTGCTGGCTGGAACGCCTGCAACTGGCAAAAACGTTAGGCTTCGATTTTGTCGAAATGTCGGTAGATGAAACTGACGATCGCCTGTCGCGCCTCAACTGGAGCCGCGAGCAGCGTCTGGCGCTGGTc > 1:1089762/1‑143 (MQ=255) ggtCCCCGCCGGGGAGCGCTGGCTGGAACGCCTGCAACTGGCAAGAACGTTAGGCTTCGATTTTGTCGAAATGTCGGTAGATGAATCTGACGATGGCCTGTCGCGCCTCAACTGGAGCCGCGACCAGCGCCAGACGCTGCTcg < 2:534884/141‑2 (MQ=255) cgcgccgccgGGGAGCGGCGGCTGGGACGCCGGCAACTTGCAAAACCGTTAGGCTTCGATCTTCCCGAGAGGTCGGCAGAGGAAACCGACCATCGCCCGTCGCGCCTCAACTGGAGCCGCGAGCAGCGTCTGGCGCTGGTCaa < 2:378673/139‑1 (MQ=255) tCCCCGCCGGGGAGTGCTGGCTGGAACGCCTGCAACTGGCAAAACCGTTAGGCTTCGATTTTGTCGAAATGTCGGTAGATGAAACTGACGATCGCCTGTCGCGCCTCAACTGGCGCCGCGAGCAGCGTCTGGCGCTGGTCCAt > 2:980514/1‑143 (MQ=255) tCCCCGCCGGGGAGTGCTGGCTGGAACGCCTGCAACTGGCAAAAACGTTAGGCTTCGATTTTGTCGAAATGTCGGTAGATGAAACTGACTATCGCCTGTCGCGCCTCAACTGGAGCCGCGAGCCGCGTCTGGGGCTGGTCAAt > 2:1274822/1‑143 (MQ=255) tCCCCGCCGGGGAGTGCTGGCTGGAACGCCTGCAACTGGCAAAAACGTTAGGCTTCGATTTTGTCGAAATGTCGGTAGATGAAACTGACGATCGCCTGTCGCGCCTCAACTGGAGCCGCGAGCAGCGTCTGGCGCTGGTCAAt > 1:1047346/1‑143 (MQ=255) cccGCCGGGGAGTGCTGGCTGGAACGCCTGCAACTGGCAAAAACGTTAGGCTTCGATTTTGTCGAAATGTCGGTAGATGAAACTGACGATCGCCTGTCGCGCCTCAACTGGAGCAGCGAGCAGCATCTGGCGCTGGGCAACGc > 2:1265572/1‑143 (MQ=255) cgccgGGGAGTGCTGGCTGGAACGCCTGCAACGGTCAAGAACGTTAGGCTTCGATTTTGTCGAAATGTCGGTAGATGAAACTGACGATCGCCTGTCGCGCCTCAACTGGAGCCGCGAGCCGCGTCGGGCGCCGGTCagggcgg > 2:973164/1‑137 (MQ=255) gccgGGGAGTGCTGGCTGGAACGCCTGCAACTGGCAAAAACGTTAGGCTTCGATTTTGTCGAAATGTCGGTAGATGAAACTGACGATCGCCTGTCGCGCCTCAACTGGAGCCGCGAGCAGCGTCTGGCGCTGGTCAATGCGAt < 1:1214823/143‑1 (MQ=255) ccgGGGAGTGCTGGCTGGAACGCCTGCAACTGGCAAAAACGTTAGGCTTCGATTTTGTCGAAATGTCGGTAGATGAAACTGACGATCGCCTGTCGCGCCTCAACTGGAGCCGCGAGCAGCGTCTGGCGCTGGTCAATGCGAtt < 2:1167983/143‑1 (MQ=255) ggggAGTGCTGGCTGGAACGCCTGTAACTGGCAAAAACGTTAGGCTTCGATTTTGTCGAAATGTCGGTAGATGAAACTGACGATCGCCTGTCGCGCCTCAACTGGAGCCGCGAGCAGCGTCTGGCGCTGGTCAATGCGAttgt < 1:158202/143‑1 (MQ=255) gAGTGCTGGCTGGAACGCCTGCAACTGGCAAAAACGTTAGGCTTCGATTGTGTCGAAATGTCGGTAGATGAAACTGACGATCGCCTGTCGCGCCTCAACTGGAGCCGCGAGCAGCGTCTGGCGCTGGTCAATGCGATTGTTGa > 2:969707/1‑143 (MQ=255) tGCTGGCTGGAACGCCTGCAACTGGCAAAAACGTTAGGCTTCGATTTTGTCGAAATGTCGGTAGATGAAACTGACGATCGCCTGTCGCGCCTCAACTGGAGCCGCGAGCAGCGTCTGGCGCTGGTCAATGCGATTGTTGAAAc > 2:948704/1‑143 (MQ=255) | GTATCCGTGATGCCGCTTCTCCGGTGGAAGCCGCACGTCAGTTCAAACGTTCCATCGCTGAACTGTGGGGCTAAGGAGCGGATATGTTGTCCAAACAAATCCCGCTTGGCATCTATGAAAAAGCGCTCCCCGCCGGGGAGTGCTGGCTGGAACGCCTGCAACTGGCAAAAACGTTAGGCTTCGATTTTGTCGAAATGTCGGTAGATGAAACTGACGATCGCCTGTCGCGCCTCAACTGGAGCCGCGAGCAGCGTCTGGCGCTGGTCAATGCGATTGTTGAAAC > NC_000913/4422763‑4423045 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |