| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,479,016 | G→C | 7.5% | intergenic (+127/+18) | rraB → / ← yjgM | ribonuclease E inhibitor protein B/putative acetyltransferase YjgM |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,479,016 | 0 | G | C | 7.5% | 289.9 / 11.4 | 111 | intergenic (+127/+18) | rraB/yjgM | ribonuclease E inhibitor protein B/putative acetyltransferase YjgM |
| Reads supporting (aligned to +/- strand): ref base G (56/44); new base C (5/4); total (63/48) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.01e-01 | |||||||||||
Only 100 of 112 total aligned reads displayed.
GGAGTTCGCCACTAATTAAGCGTAGCGCATCAGGCCCAGGTAGTTCCTGCAACCTGGTGAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTT > NC_000913/4478875‑4479158 | ttCGCCACTAATTAAGCGTAGCGCATCAGGCCCAGGTAGTTCCTGCAACCTGGTGAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAacac > 1:999649/1‑143 (MQ=255) gcACTAATTAAGCGGAGCGCATCAGCCCCAGGTAGTTCCTGCAACCTCGTGAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGTGTTCAACTCGCgg < 2:1025538/142‑1 (MQ=255) ccACTACTTCAGCCTAGCGCATCACGCCCAGGTAGTTCCTGCAACCTGGTGAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCgg < 1:131598/143‑1 (MQ=255) cACTAATTAAGCGTAGCGCATCAGGCCCAGGTAGTTCCTGCAACCTGGTGAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCGTAAACAAAACGTACGTCGTTCATGTTCGAATGCCCGCGAGTCAAACACGCggg > 2:76993/1‑143 (MQ=255) cACTAATTAAGCGTAGCGCATCAGGCCCAGGTAGTTCCTGCAACCTGGTGAATTTGTAGCCCGGATAAGGCATGCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCggg > 1:3137/1‑143 (MQ=255) tAATTAAGCGTAGCGCATCAGGCCCAGGTAGTTCCTGCAACCTGGTGAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGTGTTCAACTCGCGGGCAt < 1:387693/143‑1 (MQ=255) tAATTAAGCGTAGCGCATCAGGCCCAGGTAGTTCCTGCAACCTGGTGAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCAt > 2:725189/1‑143 (MQ=255) aaTTAAGCGTAGCGCATCCGGCCCAGGTAGTTCCTGCAACCTGGTGAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCAtt < 2:1265449/143‑1 (MQ=255) aTTAAGCGTAGCGCATCAGGCCCAGGTAGTTCCTGCAACCTGGTGAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGACTGCCCGCGCGTTGAACACGCGGGCAttt > 2:175671/1‑143 (MQ=255) tAAGCGTAGCGCATCAGGCCCAGGTAGTTCCTGCAACCTGGTGAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTCCGTTGTTACTGTTCGAATGCCCGCGCGTCGAACACGAGGACattatt > 1:2621/1‑143 (MQ=255) tAAGCGTAGCGCATCAGGCCCAGGTAGTTCCTGCAACCTGGTGAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCAttttt < 2:336307/143‑1 (MQ=255) gaaGCGTAGCGCATCAGGCCCAGGTAGTTCCTGCAACCGGGTGAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCTGCATAAACAAAACGTACGTTGTTAATGTTCGGATGCCCGCGAGTTGAACACGCGGGCAttttt < 2:169503/142‑1 (MQ=255) aGCGTAGCGCATCAGGCCCAGGTAGTTCCTGCAACCTGGTGAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCGttttttt > 2:68394/1‑143 (MQ=255) gTAGCGCATCAGGCCCAGGTAGTTCCTGCAACCTGGTGAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTaga > 1:1108072/1‑143 (MQ=255) tAGCGCATCAGGCCCAGGTAGTTCCTGCAACCTGGTGCATTTGTAGCCCGGATAAGGCATTCATGTCACCTCCGGCATAAACAAAACGTACGCTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATGTTTCTagag > 2:167126/1‑143 (MQ=255) tAGCGCATCAGGCCCAGGTAGTTCCTGCAACCTGGTGAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTagag > 1:282761/1‑143 (MQ=255) aGCGCATCAGGCCCAGGTAGTTCCTGCAACCTGGTGAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGt < 1:433928/143‑1 (MQ=255) aGCGCATCAGGCCCAGGTAGTTCCTGCAACCTGGTGAATTTGTAGCCCGGATAAGGCATTCAGGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGGATGCCCGCGAGTTGAACACGCGGGCATTTTTGTggaga > 2:426066/1‑142 (MQ=255) gcgcATCAGGCCCAGGTAGTTCCTGCAACCTGGTGAATTTGTAGCCCGGATAAGGAAATCATATCACATTGGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGtt > 1:937870/1‑143 (MQ=255) cgcATCAGGCCCAGGTAGTTCCTGCAACTTTGTGAATTTGTAGCCCGTATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTc < 2:531682/143‑1 (MQ=255) cgcATCAGGCCCAGGTAGTTCCTGCAACCTGGTGAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCAtttttt > 1:320552/1‑135 (MQ=255) cgcATCAGGCCCAGGTAGTTCCTGCAACCTGGTGAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCAtttttt < 2:320552/135‑1 (MQ=255) gcATCAGGCCCAGGTAGTTCCTGCAACCTGGTGAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGCGTTGAACACGCGGGCATATTTTTAGAGTTcg > 2:235012/1‑143 (MQ=255) gcATCAGGCCCAGGTAGTTCCTGCAACCTGGTGAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTcg < 2:1166264/143‑1 (MQ=255) aTCAGGCCCAGGTAGTTCCTGCAACCTGGTGAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCA‑TTTTTTAGAGTTCgcgc < 2:310407/143‑1 (MQ=255) tCAGGCCCAGGTAGTTCCTGCAACCTGGTGAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCgcgc < 1:81505/143‑1 (MQ=255) cAGGCCCAGGTAGTTCCTGCAACCTGGTGAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGCTGAACACGCGGGCATTTTTTTAGAGTTCGCGCa > 2:923531/1‑143 (MQ=255) gCCCAGGTAGTTCCTGCAACCTGGTGCATTTGTAGCCCGGATAAGGCATGCATGTCACATCCGGCAGAAACACAACGTACGTTCGTACAGTTCGAATGCCGGCGCGGAGAACACGCGCGCCTTTCTTTCGAGTAAGCGCcaca > 2:352565/1‑143 (MQ=255) gCCCAGGTAGTTCCTGCAACCTGGTGAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCGACa < 1:819485/143‑1 (MQ=255) gCCCAGGTAGTTCCTGCAACCTGGTGAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACa < 1:758326/143‑1 (MQ=255) cccAGGTAGTTCCTGCAACCTGGTGAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGCTGTTAATGTTCGAACGCCCGCATCTCGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACAt > 2:563776/1‑143 (MQ=255) cggTCGTGCCTGCAACCTGGCGAAATTGTAGCCCGGATAACGCATTCATGTTACATCCGGCATAAACAAAACGTACGTTGTTAAAGTTCGATTGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCg < 2:313455/142‑1 (MQ=255) gTAGTTCCTGCAACCTGGTGAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCa < 2:187558/143‑1 (MQ=255) gTAGTTCCTGCAACCTGGTGAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCa > 1:323151/1‑143 (MQ=255) ttCCTGCAACCTGGTGAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTc < 1:693388/143‑1 (MQ=255) ttCCTGCAACCTGGGGAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCACAACATCCGCACTTc < 2:926016/143‑1 (MQ=255) tCCTGCAACCTGGTGAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTca < 1:255685/143‑1 (MQ=255) tCCTGCAACCTGGTGAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTca < 1:199398/143‑1 (MQ=255) cTGCAACCTGGTGAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTcaca > 1:261961/1‑143 (MQ=255) tGCAACGTGGTGAATGTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACaa < 1:177474/143‑1 (MQ=255) ggCATCCCGGTGAATGGGTTGCCCGTCCAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACaa < 2:930630/142‑1 (MQ=255) gCAACCTGGTGAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTCGATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTGTGTAGAGTCCGCGCAACACCCGCACTTCACAAt > 2:657712/1‑143 (MQ=255) gCAACCTGGAGAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGGTGAGAAAGGTCGAATGCCCGCGAGATGCACACGCGGGCATTTTTTTAGAGTTCGGGCAACATCCGCACTTCACAAt > 1:1117500/1‑143 (MQ=255) cAACCTGGTGAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATc < 1:1200823/143‑1 (MQ=255) aCCTGGTGAATTTGTAGCCCGGATAAGGCATTCCTGTCCCATCCCGCATAACCAAAACGAACGCCCTTAACGCTCGACTACCTCCGACTTCACCAAGCAGGCATTTTTCCAGAGCTCCCGCCACATCCGCGCTTcccacacca > 2:1195816/1‑138 (MQ=255) aCCTGGTGAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAACCAAAACGTCCGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGa < 2:847367/143‑1 (MQ=255) aCCTGGTGAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGa < 2:717396/143‑1 (MQ=255) ccTGGTGAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGAc > 1:1027923/1‑143 (MQ=255) tGGTGAATCTGTATCCCGCATAAGGCATTCATGTCACCTCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAGTGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACAt < 1:417941/143‑1 (MQ=255) gTGAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATgg > 2:94834/1‑143 (MQ=255) tGAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTGATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTCTTTTAGCGCTCGCGCACCGTCCGCACTTCAGAAGCGACATCGc > 2:758042/1‑143 (MQ=255) tttGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCCCTTCACCATCGACGTGGCACGt > 1:1134895/1‑143 (MQ=255) tGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCTGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGAGc > 2:302313/1‑143 (MQ=255) gTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTaga < 1:1219376/100‑1 (MQ=255) gTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTaga > 2:1219376/1‑100 (MQ=255) tAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGGAACATCCGCACTTCACAATCGACATGGCCCGTGCAg < 1:829205/143‑1 (MQ=255) gCCCGGATAAGGCATGCATGTCACATCCGGCAGAAACAAACCGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTGCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGcc < 2:782072/143‑1 (MQ=255) cccGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGGTGTTAATGCTCAAATGCCCGCGAGTTGAACACGCCGGCATTTTTTTAGAGTTCGCGCACCATCCGCACTTCACCATCCACATCGCCCTGGCAGCCa > 2:574279/1‑143 (MQ=255) ccGGATAAGGCATTCATGTCACATCCGGCATAAACAAGACGTACGTTGTTAATGTTCGAATGTCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCaa < 1:1041000/143‑1 (MQ=255) ggATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAgc > 2:1151993/1‑143 (MQ=255) aGGCATTCATGGCACATCCGGCATAAACAAAACGTACGGTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATGTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATa < 1:503086/143‑1 (MQ=255) ggCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCCGCAAAGCCCagag > 2:417545/1‑143 (MQ=255) ggCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAg > 1:17047/1‑143 (MQ=255) gCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTAGCCGAAGAGCCGCACTTCCAAACCGACATGGCCCGTGCAGCCATGCCCATact > 2:1176228/1‑141 (MQ=255) aTTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTTAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTCCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCg > 2:904294/1‑143 (MQ=255) aTTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTACAGTTCGCGCATTATCCGCACTTCCCAATCGACCTGGCCCGTCAAACCAAGCCCATGGTca > 1:588370/1‑142 (MQ=255) gTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGc < 1:684590/143‑1 (MQ=255) tCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCt < 1:155806/143‑1 (MQ=255) acaTCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCa > 2:1228229/1‑143 (MQ=255) tCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACAGGGCCCGTGCAGCCAAGCGCATAGCCGATATGCGCCAAg > 2:688296/1‑143 (MQ=255) gggCATAAGAAAAGCGTACGTGGTTAATGTGCGAATGCCGGCGAGTTGAAGACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAAGCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGcc < 2:800946/142‑1 (MQ=255) cGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCACGTGCAGCCAAGCGCATAGTCGATATGCGCAAAGcc > 1:484172/1‑143 (MQ=255) ggCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAGGCGCATGGTCGCTATGCTCAAAGccc > 1:628471/1‑143 (MQ=255) gCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGAACTGCTCAAAGCCCa > 2:411819/1‑143 (MQ=255) cATAAACAAGACGTACGTTGTTAGTGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGCCCaa < 2:311085/143‑1 (MQ=255) cATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGCCCaa > 2:1084129/1‑143 (MQ=255) aaCAAAACGTACGTTGGTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGCCCAAATGc < 1:580019/143‑1 (MQ=255) aCAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGCCCAAATGCt > 1:803352/1‑143 (MQ=255) gtacgtTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCCGCCAAGCGCCTAGTCGATATGCCCAACGCCCCATCGCTCAtcact > 1:220556/1‑139 (MQ=255) ttAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGCTATGCGCAAAGCCCAGATGGTCCTAGAgcgcgcggg > 1:511316/1‑138 (MQ=255) tAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGc > 1:1031902/1‑143 (MQ=255) aaTGTTCGAATGCCCGCGAGTTGAACGCGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTGCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGGCGATACGCTCGAAGCCCCAACCCTGCTGAAGCGCAAttcgt > 1:715439/1‑139 (MQ=255) tggtCGAATGCCCCCGAGTTGAACACGCGGGCATTTTTGTAGAGTTCGCGCAACATCCGCACTTCACAATCGACAGGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTc < 1:1130371/140‑1 (MQ=255) ttCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTATAGTTCGCGCAACATCCGCACTTCACAAGCGACATGGCCCGTGCAGCCAAGCGCCTAGTCGATATGCTCAAAGCCCAAATGCTCATAAACGGCAATgggtctcg > 2:322491/1‑137 (MQ=255) aaaaaTGCCCGCGTGTTCAACTCGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCtt > 2:204861/4‑143 (MQ=255) cGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCttt > 2:611897/1‑143 (MQ=255) gAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACCTGGCCCGTGCAGCCAAGCGCATAGTCGATCTGCCCAAAGCCCACCTGCTCATAAAGCGCAATGGCTTCCATTa > 1:87809/1‑143 (MQ=255) aaTGCCCGCGTGTTCAACTCGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTaa < 1:204861/143‑1 (MQ=255) cccGCGTGTTCAACTCGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCGTAGTCGCCACGCTCAACGCACCAATGCCCATGACGCGCAAGGGCGTCCTTTaaaaaa > 1:1268575/1‑143 (MQ=255) cccGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTaaaaaa < 1:1160590/143‑1 (MQ=255) ccGCGTGTTCAACTCGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTAACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTaacaaca > 2:942918/1‑141 (MQ=255) ccGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCCGCCAAGCGCATAGTCGATATGCTCAAAGCCCAAATGCTCATAAACCGCCATGGCCTCCTTTAAAAAAg > 2:242494/1‑143 (MQ=255) ccGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCCTCCTTTAAAAAAg > 1:746847/1‑143 (MQ=255) ccGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATACGCAATTCAAAATCGAAATGGCCAGTGAAGCAAAGCGCATAGTCGATATGCTCCAAGCTCAACTGTACATAAAGAGCAAAAGACTCCATTACAAAAg > 2:606991/1‑143 (MQ=255) cgcgAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTGCACAAGCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGc < 1:455161/143‑1 (MQ=255) gcgTGTTCAACTCGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGCCCAAATGCTCATCACGCGCAATGGCTTCATTTACAAAAGCg > 1:550643/1‑143 (MQ=255) gcgAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGCCCAAATGCTCATACAGCGCAATGGCTTCCCTTAAAAAcgcg > 2:20543/1‑143 (MQ=255) cggatttGAACACGCGGGCATTTTTTTAGAGGTCGCGCAACATCCGCACTTCACAACCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCg < 1:451471/138‑1 (MQ=255) gAGCTGACCACGCGGGCATTTTTTTAGAGATCGCGCCACGTCAGTAATTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGt < 2:11678/143‑1 (MQ=255) ttGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATGTGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTACAAAAGCGGTCGt > 2:475425/1‑143 (MQ=255) | GGAGTTCGCCACTAATTAAGCGTAGCGCATCAGGCCCAGGTAGTTCCTGCAACCTGGTGAATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTT > NC_000913/4478875‑4479158 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |