| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,466,345 | T→C | 5.7% | pseudogene (954/2518 nt) | ydbA → | putative outer membrane protein, N‑terminal fragment |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,466,345 | 0 | T | C | 5.7% | 282.3 / 2.7 | 119 | pseudogene (954/2518 nt) | ydbA | putative outer membrane protein, N‑terminal fragment |
| Reads supporting (aligned to +/- strand): ref base T (55/50); new base C (5/3); total (62/57) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.21e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 123 total aligned reads displayed.
ACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGAT > NC_000913/1466203‑1466486 | aaaGCGCGACAGTGCATAACCAGAGCACCATGACCGTCACCGATCCGGAGTCCATTGGTATCCAGATCGACGGTGACAAGTCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAAt < 1:705467/141‑1 (MQ=17)aCAGGGCGACGGTGGATAAGAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAAt < 2:1281866/143‑1 (MQ=255)aCAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGAGGCACCGGCACCCAGATGAAt > 2:1278956/1‑143 (MQ=255) aGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATgg < 2:656055/143‑1 (MQ=255) aGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGGCCATGGGTATCCAGATCGACGGTGACGAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGAGTAATgg > 2:1035829/1‑143 (MQ=255) gcgcGACGGTGGATAAGAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGt < 2:950927/143‑1 (MQ=255) gcgcGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGt < 1:785864/143‑1 (MQ=255) gcgcGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGt < 1:910298/143‑1 (MQ=255) gcgACGGTGGATAACCAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACCGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGtga < 2:38071/143‑1 (MQ=255) gACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGGATCCAGGTCGACGGTGCCCAGGCCGTCGTCAATAACGAAGGCGACAGCGCCATCACCAACGGTGGCACCGGGACGCAAATTAACGGtgaga > 2:558357/1‑141 (MQ=11) gTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCCTCGTCAAGAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATAAATGGTGATGgcgc > 2:137600/1‑143 (MQ=255) gTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGACCATGGGTATCCAGATCGACGGCGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCAGCGGCACCCAGATTAATGGTGATGAGGc > 1:686841/1‑143 (MQ=255) gATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACGAACGGTGGCACCAACACCCAGATTAATGGTGATGACGCCAc > 2:1238224/1‑143 (MQ=255) aTAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACg < 1:1000286/143‑1 (MQ=255) aaCAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGTACCGGCACCCAGATTAATGGTGATGACGCCACGGc < 1:75392/143‑1 (MQ=255) cAAGGGCACCATGACCGTCACCGATCCGGAGTCTATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCCCCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCaa > 1:885419/1‑143 (MQ=255) cAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCaa > 2:278896/1‑143 (MQ=255) aaGGGCACCATTACCGGCACCGATCCGGATACCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCaaa < 2:438412/143‑1 (MQ=255) aGGGCGCCAGGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAaac < 1:26112/143‑1 (MQ=255) ggCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGACGGCGAGAGCACCATCACCACCGGTGGGACCGGCACCCAGATTAATGGCGATGACGCCACGGCAaacaa > 2:265522/1‑143 (MQ=255) ggCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGCGCACAATCACCAACGGTGGCAACGGCACCCACATTAACGGGGATGACGCCACGGCacacca > 2:922427/1‑141 (MQ=18) cGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCACCGGTGGCATCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCaaaa < 2:514023/143‑1 (MQ=255) cGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCaaaa < 1:887330/143‑1 (MQ=255) cGTCACCGATCCGGAGTCCATGGGTATCCAGATCGAAGGTGACAAAGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAAAAGTGGTTCCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCaaaa < 1:1119910/143‑1 (MQ=18) cGTCACCGACCCGGAGTCCATGGGTATCCAGAGCGACGGTGCCAAGGCCATCCTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCaaaa < 1:493881/143‑1 (MQ=255) tCACCGATCCGGAGTCCATGGGTGTCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCACACAAGGACGGCCAGacc > 2:1267085/1‑143 (MQ=17) tCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCGAGATGAATGGTGATGACGCCACGGCAAACAACAACGGCAAAacc > 1:219653/1‑143 (MQ=255) aCCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAGAaccgc > 1:990079/1‑141 (MQ=255) cGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCg < 1:598267/143‑1 (MQ=255) tCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGGCGCCACGGCAAACAACAACGGCAAAACCACCGTTg > 1:648064/1‑143 (MQ=255) cGGAGTCCATGGGTATCCAGATCGACGGTGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGAGCAGTGGTGGTGCCGCCCCGGCAAACAACAACGACAAAGACACCgccgcc > 2:495498/1‑138 (MQ=18) cGGAGTCCATGGGTATCCAGATCGACGGTGACAATGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGAc < 2:812498/143‑1 (MQ=255) cGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGAc > 1:139361/1‑143 (MQ=255) aGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGCCGGc > 1:1040509/1‑143 (MQ=255) tctacgggTATCCAGATCGACTGTGTCATGGCCATCTTCAAGACCGAAGGCAAGAGCACCATACCCAACGGTGGCACCGGCACCCACACTCATCGTACTAAAGCCACATCAAACAACAACGGCAAAACCACCGTTGACGGCaa < 2:1251090/138‑1 (MQ=12) tCCATGGGTATGCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCaa < 1:1239570/143‑1 (MQ=255) tCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCaa > 1:366768/1‑143 (MQ=255) tCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCaa < 1:631740/143‑1 (MQ=255) ccATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAg < 1:282705/143‑1 (MQ=255) ggTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTc < 1:379022/143‑1 (MQ=255) cAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCgg > 1:756100/1‑143 (MQ=255) aGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCACACAACAACGGCAAAACCACCGTTGCCGGCAAGGACTCCACCGGt > 2:687631/1‑143 (MQ=255) aGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGt > 1:943664/1‑143 (MQ=255) aGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACAGTTGACGGCGAGGATACCACCGGt > 1:519876/1‑143 (MQ=255) aGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGAATTATGGTGATGCAGCCACGCCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGt > 1:238119/1‑143 (MQ=18) aTCGAGGGTGACAAGGCCATCGTCACTAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTAc < 1:86301/143‑1 (MQ=255) gACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGAGTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCACGGATTCCACCGGTAGGGa > 2:1039619/1‑143 (MQ=255) aCGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATGCCACCGGTACGGaa > 2:126142/1‑143 (MQ=255) cgctGACAAGGCCATCGTCACTGACGAAGGCGAGAGCACCATCAGCACCGGCGGCACCGGCACCCAAATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGaaa < 1:8692/140‑1 (MQ=17) cGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTAACGGCAAGGATTCCACCTGTACGGaaa < 1:708591/143‑1 (MQ=255) gTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAaaca < 2:1278352/93‑1 (MQ=255) gTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAaaca > 1:1278352/1‑93 (MQ=255) tGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAAttg > 2:34616/1‑141 (MQ=255) tGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATGAATGGGGATGACGCCCCGGCAGACAACAACGGCAAAACCACCGTTGACGGCCAGGGATCCACCGGTACGGAAATCa > 2:373484/1‑143 (MQ=17) cAAGGCCACCGCCAATAACGCAGGCGGGGGCACCCTCACCAACGGTGGCACCTGCCCCCAGATTAATGGTGATGACGCCACGGCAAACAACATCGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACg < 2:658026/143‑1 (MQ=17) aaGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCGACCGGTACGGAAATcgcggg > 2:1139771/1‑138 (MQ=255) aaGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCaccag > 2:751265/1‑139 (MQ=255) aaGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACgg > 1:357271/1‑143 (MQ=255) cATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGtaata > 1:1058866/1‑143 (MQ=255) cGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACg < 1:9624/143‑1 (MQ=255) gTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCGACGGTAATAACgg > 1:1163582/1‑143 (MQ=255) aaTAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATGAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGaaa < 1:432691/143‑1 (MQ=255) aTAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGaaaa > 1:592109/1‑143 (MQ=255) aTAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGaaaa < 1:440545/143‑1 (MQ=255) tAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCGACGGCAATAACGGgaagg > 2:181762/1‑141 (MQ=255) aCGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCAc > 1:643705/1‑64 (MQ=255) cGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAACGGTGATGACGCCACGGCaaa > 2:279022/1‑69 (MQ=255) gAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAACTTAt > 1:875791/1‑143 (MQ=255) aaGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTAtt > 1:841109/1‑143 (MQ=255) gCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATACAg > 1:717669/1‑143 (MQ=255) gagaGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCaa > 2:662980/1‑61 (MQ=255) gagaGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGa > 1:975705/1‑143 (MQ=255) cACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCaaaa > 2:306697/1‑71 (MQ=255) aCCATCACCAACGGTGGCACCGGCACCCAGATCAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCCAGGATTCCACCGGCACGGAAATCAACGGGACGCACGGAAGAGTTATCCAGGACGGCGa > 2:669464/1‑143 (MQ=17) ccATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGAt < 1:358889/143‑1 (MQ=255) cATCACCAACGGTGGCACCGGCACCCAGATTAATGGGGATGACTCCACGGCAAACAACAACGGCAAAACCACCGTTGGCGGCAAGGATTCCACCGGTGCGGAAATCAACGGTAACAACGGAACAGTTGTTCAGGACGGCGATc > 1:628460/1‑143 (MQ=17) tCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTg < 1:190244/143‑1 (MQ=255) cACCAACGGCGGCACCGGCACCCAGATTAAGGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTgg < 1:1082519/143‑1 (MQ=255) cccAACGGTGGCCACGGCACCCAGATGAATCGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGAGTACACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGa < 1:444949/142‑1 (MQ=18) aCCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAaacaacaac > 1:1226597/1‑57 (MQ=255) aCCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGa < 1:1238224/143‑1 (MQ=255) cAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGCCGGCAAGGATTCCACCGCTACAGAAATCAACGATAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATg > 1:213541/1‑143 (MQ=255) tagcaccggcaccgAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAgcg < 1:1151723/141‑1 (MQ=255) gcaccggcaccCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAgcggc > 1:213726/1‑143 (MQ=255) cggcaccCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAgcggcggcg < 1:278896/143‑1 (MQ=255) ggcaccCATACTAATCGTGATGACGCCACGACAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGcggcggcgg < 2:826031/143‑1 (MQ=255) ggcaccCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGATATTCAGGACGGCGATCTGGAGGTCAGcggcggcgg > 2:781898/1‑143 (MQ=255) gcaccCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCGCCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGt < 1:704819/143‑1 (MQ=255) gcaccCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTAc > 1:9179/1‑79 (MQ=39) gcaccCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTAc < 2:9179/79‑1 (MQ=39) ccccAGATTAAGGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCa < 1:355010/142‑1 (MQ=255) ccAGATTAGTGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATGCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACg < 1:751265/143‑1 (MQ=255) ccAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCaa > 2:1155614/1‑60 (MQ=40) ccAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCACCGGCAATAACGGGAAAGAGAATCAGGACGGCGATCGGAATGTCGGCGGCGGCGGACACg > 2:115299/1‑143 (MQ=11) ccAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCGGCGGCGGCGGTCACg > 1:706880/1‑143 (MQ=255) ccAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCATTGAAGGCAAGGATTCTCACGGCTCGTATGCCAACGGTAATAACGGAAAAGTTATTCAGGACCGCGATCTGGATGTCAGCGGCGGCGGTCACg > 1:594832/1‑143 (MQ=17) aTTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTAt > 1:1134331/1‑143 (MQ=255) ttAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTAtt < 1:1035829/143‑1 (MQ=255) aTGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGat < 2:366768/143‑1 (MQ=255) aTGGTGATGACGCCACGGAAAACAACAACGGCAAAACCACCGTTGACGGCAGGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGat < 2:885419/143‑1 (MQ=255) | ACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGAT > NC_000913/1466203‑1466486 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |