| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,917,406 | A→G | 12.5% | V287A (GTT→GCT) | atpG ← | ATP synthase F1 complex subunit gamma |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,917,406 | 0 | A | G | 12.5% | 258.6 / 2.8 | 109 | V287A (GTT→GCT) | atpG | ATP synthase F1 complex subunit gamma |
| Reads supporting (aligned to +/- strand): ref base A (49/41); new base G (2/15); total (52/57) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.22e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 112 total aligned reads displayed.
GCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCGCCATTGTCGGTCGCGGCTTTCATCGCCACCATACGGGCGGCCT > NC_000913/3917264‑3917547 | gCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTaaa > 1:693218/1‑143 (MQ=255) gtCATTACCGTTTTGCACCTCAAGAGCATCGTACACGCGCGGGACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAAc < 2:298828/142‑1 (MQ=255) tCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTCCGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAAcc > 1:1267084/1‑143 (MQ=255) tCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAAcc > 1:658606/1‑143 (MQ=255) ttACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTCCGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTCAAATCCTCTACGAAATAACCTGTTTAAGCcgcg > 2:1056864/1‑143 (MQ=255) ttACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGACATCACCTGTTTAAGCcgcg > 1:278234/1‑143 (MQ=255) tACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCgcgg < 2:1000908/143‑1 (MQ=255) aCCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCgcggc > 1:940818/1‑143 (MQ=255) ccATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCAGCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCgcggcg < 1:1044871/143‑1 (MQ=255) ccATTTTGCACCTCAAGAGCAGCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCgcggcg < 1:1066215/143‑1 (MQ=255) cATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGCGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGcggcgg > 1:829096/1‑143 (MQ=255) cATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGAGAATTAGACGTCAACTACGGCGCCGATTACATGGACAATATTTCCAGTAGCCATCTTAAATCCTCTACGAAACAACCTTGTTCAACCGcggcgg > 1:228048/1‑143 (MQ=255) aCCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCgag > 1:453392/1‑143 (MQ=255) aCCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGACTACCCGGACCATGTTGGAGCTAATCGTGCGACCTCCTCCACCAAACAACCCGTGTACACCGCGGCGGCCCCCgcg > 1:590054/1‑141 (MQ=255) cTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGAc > 1:850327/1‑143 (MQ=255) tCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACg > 1:1156304/1‑143 (MQ=255) tCAAGAGCATCGTACACGCGCGGTAAGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTATAAACCGCGGCGGCACCCGAGACg > 2:192641/1‑143 (MQ=255) cAAGAGCATCGTACACGCGCGGTACGGCATCCAGAGGGAATTCGACGTCAACTACGGCGCCGTTTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGa < 1:647674/143‑1 (MQ=255) agagCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGAtc < 1:730842/143‑1 (MQ=255) ccgCATCGCACCCGCGCGGTCCGGCATCCTGAGGGAATTCGACGTCACCTACGGCGCCGACTACCTCGACCATCCTTCCAGTAGCCATCTTAAATCCTCTCCGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGAtct < 1:73890/141‑1 (MQ=255) tccaccGTACACGTGCTGTACGGCATCCATAGGGAATTCGACGTCAACTTCTGCGCCGATTACCTGGACAATCTTGTCAGTAGCCATCTTAAATCCTCTACGAATTTTTCTTTTAATGCCACGGCGACCCCCGAGACGAtctc < 2:797651/138‑1 (MQ=255) cATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCgg < 1:743101/143‑1 (MQ=255) tCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTg > 1:973908/1‑143 (MQ=255) cGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTAAGCCCTCGCCTCTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGa < 1:1217516/143‑1 (MQ=255) gTACACGCGCGGTACGGCATCCAGAGGGAATTAGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGATTAAACCGCGGCGGAGCCCGAGACGAACTCGGTgcg > 2:705266/1‑141 (MQ=255) tACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGAAAATCTTTCCAGTAACAATCTTGAATCCTCTAAGAAATAACCTGTTTAAACCTCGGCGGCCACCGAGGCGAGCACGGAGAGt > 2:565587/1‑143 (MQ=255) cacGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTc < 1:1051263/143‑1 (MQ=255) acGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTcc > 1:691098/1‑143 (MQ=255) gcgcgGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCAAGTAGGCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGCTCCTg > 1:480093/1‑143 (MQ=255) cgcgGTAGGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTGTCCAGTAGCCATCTTAAATCCTCTACGGAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGa < 1:528369/143‑1 (MQ=255) cgcgGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGa < 1:1000558/143‑1 (MQ=255) cgcgGTACGGCATCCTGAGGGAATTCGACGTCAACGACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGa < 1:391461/143‑1 (MQ=255) cgGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTCCCGGAgc > 2:1015340/1‑142 (MQ=255) tACGGCATCCTGGGGGTATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTATCCATCTTAAATCCTCTACGATTTTTTTTTTTAATGATGCGGCGGCCACCGAGACGATCTCGGTGAGTTCCTGAGTAAt < 2:1034815/143‑1 (MQ=255) aCGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTCCGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATg < 1:747658/143‑1 (MQ=255) cGGCATCCTGAGGGAATTCGACTTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCACCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGc < 1:871768/143‑1 (MQ=255) cGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGACCCCCGAGACGATCTGGGTGAGTTCCTGAGTAATGc > 1:1267706/1‑143 (MQ=255) cGGCAGCCTGAGGGAATTCGACGTCAACTACGGCGGCGATTCCCTGGGCAGTCGGTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGc < 1:871817/143‑1 (MQ=255) gCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTCCCTGAGTCctgctg > 2:1230901/1‑143 (MQ=255) ctCCTGATGGAATGCGACCTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACTAATTTTTCTTTTAATGATGCGGCGACCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGc < 2:45923/142‑1 (MQ=255) cTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAACTCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGCGACGACCTCGGTGAGTTCCTGCGCAATGCTgcgcgg > 2:288544/1‑138 (MQ=255) aaTTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGCGCGTTCCTGAGTAATGCTGGCCTGCCGGGCt > 1:36314/1‑143 (MQ=255) ctCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCttt < 1:367616/142‑1 (MQ=255) gtcGTCAACTCCCGCGCCGATTACCTGGACAATCTTCCCAGTAGCCATCTCAAATCCTCTACGAAATATCCCGTATAAACCAAAGCGGCCTTCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTttgtt < 1:350381/141‑1 (MQ=255) ggcgacAACTACGGCGCCGACCACCAACACAAACTCATTTGTAGTCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTttgtt < 1:992456/138‑1 (MQ=255) gccGTCAACTGCGGCGGTGATTAGCTGGACTATCTTTCCAGTAGCCATCTTAAATCCTCTACGAGATTTCGTTTTTATGCTGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTttgtt < 2:727187/141‑1 (MQ=255) gTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGta < 1:906359/143‑1 (MQ=255) cAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAACGCTGGCCTGACGCGCTttcttttctc > 1:369268/1‑138 (MQ=255) cAACGACGGCGCTGATTACCTGGATAGTCTTTCCAGTAGCCATCTCAACTCCTCTACGAGTTTTTTTTTTAATGATGCGGCGGCCACCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGtata < 2:454820/143‑1 (MQ=255) aaCTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATAc < 1:1030835/143‑1 (MQ=255) cTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCa > 1:1018126/1‑143 (MQ=255) ggCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTg < 1:1184192/143‑1 (MQ=255) tgcCGATTACCTGGACAATCTGTCCAGTAGCCATCGTAAAGCCTCTACGAAACCACCTGTTTAAACCGCGGCGGCCCCCGGGACGATCTCGGTTAGTTCCTGAGTAATGCTGGCCTGTCGAGCTTTGTTGTATACCAACTGCa < 1:386553/142‑1 (MQ=255) cgcCGATTACCTGGACAATCTTGCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCa < 1:738402/143‑1 (MQ=255) gcCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTATAAACCGCGGCGGCCCCCGAGACGATCTCGGTGCGTTCCTGCGTACTCCTGGCCTCCCGAGCTCTGTCTTATACCACCTCCaa > 1:182209/1‑142 (MQ=255) aTTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCCGctct > 1:803529/1‑143 (MQ=255) aTTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGctct > 1:464235/1‑143 (MQ=255) aCCTGGACAATCTTTCCGGTAGCCATCTTAAAGCCTCTACGAAATATCCTTTTAAAGCTGCGGCGGCCACCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTa < 2:173734/143‑1 (MQ=255) aCCTGGACAATCGTTCCAGTAGCCATCTTAAACCCTCTACGAATTTTTTTGTTTATGCTGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTa < 2:1190985/143‑1 (MQ=255) ccTGCACAAGCGTTCGACGAGCCATCTTAGATCCTCTACGCACTATCTTGTTTATGCCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTaa < 2:869170/143‑1 (MQ=255) cTGTACAATCTTTCCAGTAGCCATCTTAACTCCTCTACGCATTATCCTGTTTAAGCCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAAt < 2:480093/143‑1 (MQ=255) tGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATc > 1:1027290/1‑143 (MQ=255) tGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATc < 1:64049/143‑1 (MQ=255) ggACAATCTTTCCAGTCGCCATCTCAAATCCTCTCCGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCa < 1:904420/143‑1 (MQ=255) ggACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTCTACCAACTGCCGCTCTTTAAtaa > 1:1016606/1‑141 (MQ=255) taCAATCTTTCCAGTAGCCATCTTAATTCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGAGAGTTCCTGAGTAATGCTGGCCTACCGAGCTTTGTTGTATACCCACTGCAGCTCTTTAATCAg > 2:1220969/2‑143 (MQ=255) tCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTgc < 1:1015340/143‑1 (MQ=255) catcccAGTAGCCATCCTAAATCCACTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCGCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTgcc < 1:587085/139‑1 (MQ=255) ttgccAGTAGCCATCTTAAATCCTCTACGAAATAACCTGGTGAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTgccg < 1:767492/140‑1 (MQ=255) ttCCAGTAGCCATCTTAATTCCTCTACGATTTTTCTTGTTAATGACGCGGCGACCACCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTgccgc < 2:386320/143‑1 (MQ=255) tgccAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTgccgc < 1:744061/141‑1 (MQ=255) ccAGTAGCCAGCTGAAAGCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCGCCa < 1:146671/143‑1 (MQ=255) cAGTAGCCATCTTAAATCCTCGACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCGCCAt < 1:486791/143‑1 (MQ=255) gaGCCATCTTAAATCCTCTGCGGATTAGTCTGTTTATGCCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCGCCATTgt < 2:1085616/142‑1 (MQ=255) gCCATCTTAAATCCTCGACGAAATAGCCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCGCCATTgtcg < 1:522957/143‑1 (MQ=255) aTCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCCGCCGCCATTgtcgcta > 2:87192/1‑140 (MQ=255) aTCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGCAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCCCTTTAATCAGCCTGCCGCCAATatcgcac > 2:124921/1‑140 (MQ=255) aTCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGGGAGTACATGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTATTTAATCAGGCTGCGGACATTggcggtc > 1:316943/1‑143 (MQ=255) tCTTAAATCCTCTACGCAATAACCCGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCGCCATTgtcggtcg < 1:994291/143‑1 (MQ=255) tCTTAAATCCTCTACGATGTTTCTTTTTAATGCTGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCGCCATTgtcggtcg < 2:880083/143‑1 (MQ=255) cTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCGGAGTAATGCTGACATGACGAGCTATGTTGTATAACAACTGCACCACTTTAATCAGGATGACGCCATTgtcgacagc > 2:19720/1‑138 (MQ=255) tAAATCCTCTACGAGTTTTTTTGTTTATGGCGCGGCGGCCACCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCGCCATTGTCGGTCGCgg < 2:604046/143‑1 (MQ=255) tCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCGCCATTGTCGGTGGCGGCttt > 1:814911/1‑143 (MQ=255) tCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCGCCATTGTCGGTCGCGGCttt < 1:298146/143‑1 (MQ=255) tCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCGCCATTGTCGGTCGCGGCtgt > 1:1101806/1‑141 (MQ=255) ctctACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTCATGCTGGCCTGACGAGCTTTGTTGTATACCAACTCCAGCTCTTTAATCAGGCTGCCGCCACCGTCGCTCGCGGCtccca > 2:430944/1‑139 (MQ=255) ctctACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTACTCAGGCTGCCGCCCTTGTCGGTCGCGGCTTTCa > 1:329023/1‑143 (MQ=255) tctACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCGCCATTGTCGGTCGCGGCTTTCAt > 1:1122652/1‑143 (MQ=255) tctACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGCAGAGTCACGGGGTAAGGCTGGCCCGTTCTGCTTGGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCGCCATTGTCGGTCGCGGCTTTCAt > 1:1275233/1‑143 (MQ=255) ctACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCGCCATTGTCGGTCGCGGCTTTCATc < 1:953884/143‑1 (MQ=255) tACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGCGACGATCGCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCACGCTGCCGCGATTGTAGGTCGCGGCTGTCATCg > 1:535389/1‑143 (MQ=255) tACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCGCCATTGTCGGTCGCGGCTTTCATCg > 1:1214694/1‑143 (MQ=255) aCGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCGCCATTGTCGGTCGCGGCTTTCATCGc > 1:298261/1‑143 (MQ=255) cGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGGCGCTCTTTAATCAGGCTGCCGTCCTTGTCGGTCGGGGCTTTCATCGcc > 1:1174432/1‑143 (MQ=255) cGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCTTTCATTGTCGGTCGCGGCTTTCATCGcc > 1:991251/1‑143 (MQ=255) cGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCGCCATTGTCGGTCGCGGCTTTCATCGcc < 1:1230901/143‑1 (MQ=255) gAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTACTCCAACTGCAGCTCTTTTATCGGGCTGCCGCCATTGTCGGTGCTGGCTTTCATCTcca > 1:665146/1‑143 (MQ=255) aCCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCGCCATTGTCGGTCGCGGCTTTCATCGCCACCATAc > 1:1025230/1‑143 (MQ=255) tAACCCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCGCCATTGTCGGTCGCGGCTTTCATCGCCACCATACGggcggc < 1:209302/143‑1 (MQ=255) aaCCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATACTAGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTGATCAGGCTGCCGCCAGTGTCGGTCGCGGCTTTCACCGCCGCGACACGGGCGGCCt > 1:392470/1‑143 (MQ=255) | GCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCGCCATTGTCGGTCGCGGCTTTCATCGCCACCATACGGGCGGCCT > NC_000913/3917264‑3917547 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |