| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,918,291 | C→T | 5.4% | intergenic (‑26/+25) | atpG ← / ← atpA | ATP synthase F1 complex subunit gamma/ATP synthase F1 complex subunit alpha |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,918,291 | 0 | C | T | 5.4% | 438.3 / 11.0 | 163 | intergenic (‑26/+25) | atpG/atpA | ATP synthase F1 complex subunit gamma/ATP synthase F1 complex subunit alpha |
| Reads supporting (aligned to +/- strand): ref base C (70/83); new base T (5/4); total (75/88) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.34e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.95e-01 | |||||||||||
Only 100 of 167 total aligned reads displayed.
TGCGATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGTTGTAGCCACCGGTCTGGTTGATCTCTTGCATCAACGGAGCGTGATCACGGTCG > NC_000913/3918151‑3918433 | tGCGATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTg < 1:164893/143‑1 (MQ=255) tGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAgg > 2:5290/1‑143 (MQ=255) tGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCCGCCCTACgg > 2:225230/1‑143 (MQ=255) gCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGc < 1:610826/143‑1 (MQ=255) gCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGc > 2:1019534/1‑143 (MQ=255) gCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGACTGCCCTAAGGc > 2:1022247/1‑143 (MQ=255) cGATTTACGCATTTTGGAAGCGGCGACTATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCa < 2:756736/143‑1 (MQ=255) gATTTACTCATTTTGGAAGCGGCGACCAGCTCCATCGCTTGAGGGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTCCGTATCTCTTTTGCGCCGGCCATGAGCTGCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCaa < 1:1044157/143‑1 (MQ=255) gATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTGTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTACTCAATGCCTTGCTGCCTGCCCCAACGcca > 2:1182942/1‑141 (MQ=255) aTTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCAGGGGCTTCCCCTTAATGCCTTGCGGCCTGCCCCAAGGCGAg > 2:958486/1‑143 (MQ=255) ttACGCATTTTGGAAGCGGCGACCATCTCCAGCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCTTGCCTTAGGGCAGgcc < 1:1184343/143‑1 (MQ=255) gcagtgtGGACGCGGCGACGATCTCCTTCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCa < 2:361690/137‑1 (MQ=255) cATTTTGGATGCGGCGAGCAGCTGCTTCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTATCCAGCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAg < 2:510837/143‑1 (MQ=255) cATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCTTGCCTTAGGGCAGGCCGCAAg < 1:703502/143‑1 (MQ=255) aTTTTGGAGGCGGCGACCATCCGCATCGCTTTAGTGTTCGTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGa < 2:1075193/143‑1 (MQ=255) aTTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGa > 1:1070375/1‑143 (MQ=255) tGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGtt > 1:40394/1‑143 (MQ=255) cgggcggcgATCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTAGCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTAc < 2:254964/140‑1 (MQ=255) cggcgACCATCTCCATCGCTTTAGTGATCTTTTGCGAGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCCGACGTTACCAgg > 1:829428/1‑143 (MQ=255) aCCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTgg < 1:1135651/143‑1 (MQ=255) ccATCTCCATCGCTTTAGTGCTCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTCAGGCAGGCCGCCAGCCCTTACCACGATTggg > 1:56615/1‑143 (MQ=255) ccATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTCACGCAAGCCGCCCGACGTTACCCGCAttcgc > 2:824219/1‑140 (MQ=255) ccATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTggg < 1:518332/143‑1 (MQ=255) aTCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGGTACCAGGCTTGGGTTGCTTTg > 1:765364/1‑143 (MQ=255) cggtttAGTGGTCGTTTGGGTGTTGTGGACGCTTGTGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGGCTGTGCTACTGCAAGTCGGCAGACGTTACCAGGATTGGGTTGCTTTGaa < 2:274430/140‑1 (MQ=255) cGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTCCGTATCGCTTTTGCGCCGGCCATGAGCTGCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGaa < 2:567101/143‑1 (MQ=255) cGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGaa < 1:277214/143‑1 (MQ=255) cGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGaa < 1:5290/143‑1 (MQ=255) cGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTAGCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGaa < 2:1133168/143‑1 (MQ=255) cGCTTTAGTGACCATTTGCGCCATCTTGACTCTTGTGGTCAAACTACGTGTCTCTTTTGCGCAGGCCTCGTTTTTCTCGTCTATGCCTTGCGGCCTGCCCTCAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGaa < 1:1263956/143‑1 (MQ=255) ttgaGTGATCGTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGa < 1:642420/140‑1 (MQ=255) ttAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGaa > 1:1036075/1‑143 (MQ=255) tGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGa > 2:812268/1‑143 (MQ=255) cgaccTTTTGCGAGTTCTGGACGCTTGCGATCGTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCACAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGa < 1:122446/139‑1 (MQ=255) tCTTTTGCGCGTTCTGGACGCCTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGa < 1:1010362/143‑1 (MQ=255) cTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGAt > 1:335687/1‑143 (MQ=255) ttttGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATg > 1:940071/1‑143 (MQ=255) ttttGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGACTGGGTTGCTTTGAAGGAATCGCGGCTg > 1:323455/1‑143 (MQ=255) ttttGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCATTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTAGCAGGATTGGGTTGCTTTGAAGGAATCGCGGATg > 1:1023627/1‑143 (MQ=255) tttGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGc < 1:942842/143‑1 (MQ=255) tGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCt < 2:1003323/143‑1 (MQ=255) cGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTCAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCttt > 1:624965/1‑143 (MQ=255) gtgtTCTGGACGCTTGCGATCTTACTACGTATCGCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCGTGCGGCCGGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTc < 2:448212/143‑1 (MQ=255) gtgcTCTGGAGGCGTGCGATCTTACTATGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGGCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTc < 2:539049/143‑1 (MQ=255) gtTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAg < 1:522370/143‑1 (MQ=255) gtTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAg < 1:179251/143‑1 (MQ=255) ttCTGGACGCTTGCGATCTTACTACGTATCTCTTTTTTTTTTTTTTTTTTCTTCTCCTCAATGCCTTGCCGCCTTTCCTTAGGCAAGCCGCCACACGTTACCCGGTTTCGGTTGTTTTGTAGGCATCGTGGATTCCTTTctcc > 2:479377/1‑140 (MQ=255) ttCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGCTGCTTCGAAGGAATCGCGGATGCCTTTCGGc > 2:555189/1‑143 (MQ=255) ttCTGGACGCTTGCCTTCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGc < 2:911176/143‑1 (MQ=255) tGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTg > 1:875604/1‑143 (MQ=255) ggACGCTTGCGTTCTTACTACGTATCTCTTTTGCGCCTGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGc < 2:1256091/143‑1 (MQ=255) gACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGcc > 1:171476/1‑143 (MQ=255) cGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCtt < 1:881510/143‑1 (MQ=255) ttGCGATCTTACTACGTATCTCTTTCGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGa < 1:1014164/143‑1 (MQ=255) gATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCCCCTCAATGCCTTGCGGCCTGCCCTACGGCAAGCCGCCAGACGTTACCCGGAGTGGGTTACCTTGAAGGAATCGAGGAGGCCTTTCAGCTTGCGTTGGATTtc > 2:90230/1‑143 (MQ=255) aTCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTtcg > 2:1258564/1‑143 (MQ=255) tcgtactacGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTtcgt < 1:439192/140‑1 (MQ=255) cTTACTACGTATCTCTTGTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTtcgtc < 2:246657/143‑1 (MQ=255) ttACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTtcgtcg > 1:317894/1‑143 (MQ=255) agtacGTATCCCTTGTGCTGCGGCCATGAGCTGCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGtt < 1:329343/141‑1 (MQ=255) actacGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGtt > 1:476841/1‑143 (MQ=255) tacGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGTTGt < 1:954467/143‑1 (MQ=255) tacGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGTTGt > 1:133961/1‑143 (MQ=255) cGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGTTGTAg < 1:1176698/143‑1 (MQ=255) cGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGTTGTAg < 1:1240594/143‑1 (MQ=255) cGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAAACGAGGATGGCTTTCAGCGTGCCTTCGAATTGCTCGTTTTAg > 2:497657/1‑143 (MQ=255) tATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTGCAGCTTGCCGTCGCTACCATCGTTGTAGcg > 2:1007236/1‑142 (MQ=255) tctcTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGTTGTAGcgcc > 2:811172/1‑140 (MQ=255) tctTTTGCGCCGGGCATGAGCGTCTCCTCAGGGCCTGGCGGCCGGCCCTAAGGCAAGCCGCCAGACGTGACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGTTGTAGCCACCg < 1:854677/143‑1 (MQ=255) tctTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATGGGGTTGCTTTGAAAGAATCGAGGATGCCTTGCAGCTTGCGTTCGATTTCGTCGTGGTACCCACCg > 2:584737/1‑143 (MQ=255) ttttGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCCGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGGTGTAGCCACCGGt > 1:944442/1‑143 (MQ=255) tGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGGCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGTTGTAGCCACCGGTCTg < 2:169881/143‑1 (MQ=255) cgcCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGTTGTAGCCACCGGTCTGGt > 1:620485/1‑143 (MQ=255) gcCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGTTGTAGCCACCGGTCTGGtt < 1:402756/143‑1 (MQ=255) ggCCAGGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGGAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGTTGTAGCCACCGGTCTGGTTGAt < 2:17814/143‑1 (MQ=255) gCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGCTTGGGTTGCTTTGAAGGAATCGAGGCTGCCTTTCAGCTTCCCTTCCATTTCGTTGTGGCAGCCACCGGTCCGGCGGAtc > 2:712771/1‑143 (MQ=255) cATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCCGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGTTGTAGCCACCGGTCTGGTTGAtctc > 2:430301/1‑143 (MQ=255) tGATCTTCTCCGTCACGCCTTTCGGCCTGCCCTAAGGCAACCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGTTTGCCTTCGATGTCGTCGTTGTAGCCACCGGTCTGGTTGATCTCtt < 1:1244118/143‑1 (MQ=255) tGAGCTTTTCCTGACGGCCTTCCGGCCTGCCCTAAGGCAGTCCGCCAGACGTTACCAGGAGTGTGTTGCTTTGAAGGACTCGAGTATCCCTTTCAGCTTGCCTTCGAGTTCGTCGTTGTAGCCACCAGTCTGCTTGATCTCtt < 2:330241/143‑1 (MQ=255) tGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGTTGTAGCCACCGGTCTGGTTGATCTCtt < 1:367680/143‑1 (MQ=255) tGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGTTGTAGCCACCGGTCTGGTTGATCTCtt < 1:718600/143‑1 (MQ=255) tGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGCGTTGCTTTCAAGTAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGTTGTAGCCACCGGTCTGGTTGATCTCtt < 1:479424/143‑1 (MQ=255) gAGCTCCCCCGCGATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAAGCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGTTGTAGCCACCGGTCTGGTTGATCTCTTg < 2:292350/143‑1 (MQ=255) ctcAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGTTGTAGCCACCGGTCTGGTTGATCTCTTGCATCAACgg > 2:52022/1‑143 (MQ=255) ctcAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTAGTCGTTGTAGCCACCGGTCTGGTTGATCTCTTGCATCAACgg > 1:131458/1‑143 (MQ=255) tcgaggCCGTGCGGCCTGCCGGAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGTTGTAGCCACCGGTCTGGTTGATCTCTTGCATCAACGGa < 2:56615/138‑1 (MQ=255) tcAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGTTGTAGCCACCGGTCTGGTTGATCTCTTGCATCAACGGa > 1:682783/1‑143 (MQ=255) tcAATGCCTTGCGGCCTGCCCGAAGGGAAGCCGCCAGACGTGACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCGTGCCTTCGATTTCGTCGTTGTAGCCACCGGTCTGGTTGATCTCTTGCATCAACGGa < 2:735541/143‑1 (MQ=255) tcAATGCCTTGCGACCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGTTGTAGCCACCGGTCTGGTTGATCTCTTGCATCAACGGa < 2:305316/143‑1 (MQ=255) cAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGCATCGAGGCTGCCTTTCAGCTTGCCTTCGATTTCGTCGTTGTAGCCACCGGTCTGGTTCATCTCTTGCATCAACggcg > 2:1194208/1‑141 (MQ=255) gttgggcccTGCCCTAAGGCAAGCGGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGTATCGAGGATGCCTTTCAGCTTGCCGTCGATTTCGTCGTTGTAGCTACCGGTCTGGTTGATCTCTTGCATCAACGGAGCGTGAt < 2:636513/136‑1 (MQ=255) cgtGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGTTGTAGCCACCGGTCTGGTTGATCTCTTGCATCAACGGAGCGTGAt < 2:38374/141‑1 (MQ=255) ttGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGTTGTAGCCACCGGGCTGGTTGATCTCTTGCATCAACGGAGCGTGATc > 2:965035/1‑143 (MQ=255) ttGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGGTGCATTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGTTGTAGCCACCGATCAGGTAGAACTCTTGCACAAACGGAGGGTGATc > 2:1206795/1‑143 (MQ=255) tcggggCCTGCCCGAAGGCAAGCCGCCAGAGGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGTTGTAGCCACCGGTCTGGTTGATCTCTTGCATCAACGGAGCGTGATc < 2:143166/139‑1 (MQ=255) gCGGCTTGCCTTAGGGCAGGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGTTGTAGCCACCGGTCTGGTTGATCTCTGGCATCAACGGAGCGTGATCAc > 1:811753/1‑143 (MQ=255) cGGCTTGCCTTAGGGCAGGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGTTGTAGCCACCGGTCTGGTTGATCTCTTGCATCAACGGAGCGTGATCACg > 1:522681/1‑143 (MQ=255) cGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGTTGTAGCCACCGGTCTGGTTGATCTCTTGCATCAACGGAGCGTGATCACg < 1:305684/143‑1 (MQ=255) ccTGCCCTAAGGCATGCCGCCAGACGTGACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGTTGTAGCCACCGGTCTGGTTGATCTCTTGCATCAACGGAGCGTGATCACGGTc < 1:1183132/143‑1 (MQ=255) cTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGTTGTAGCCACCGGTCTGGTTGATCTCTTGCATCAACGGAGCGTGATCACGGTCg > 1:1105363/1‑143 (MQ=255) | TGCGATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGTTGTAGCCACCGGTCTGGTTGATCTCTTGCATCAACGGAGCGTGATCACGGTCG > NC_000913/3918151‑3918433 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |