| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,918,299 | A→G | 5.3% | intergenic (‑34/+17) | atpG ← / ← atpA | ATP synthase F1 complex subunit gamma/ATP synthase F1 complex subunit alpha |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,918,299 | 0 | A | G | 5.3% | 453.6 / 10.6 | 170 | intergenic (‑34/+17) | atpG/atpA | ATP synthase F1 complex subunit gamma/ATP synthase F1 complex subunit alpha |
| Reads supporting (aligned to +/- strand): ref base A (71/85); new base G (5/4); total (78/92) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.34e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.05e-02 | |||||||||||
Only 100 of 170 total aligned reads displayed.
CTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGTTGTAGCCACCGGTCTGGTTGATCTCTTGCATCAACGGAGCGTGATCACGGTCGACGT > NC_000913/3918158‑3918437 | cTGCGATTTACGCATTTTGGAAGTGGCGACTATCTCCAGCGCTTTAGTGTTCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAg < 2:234858/143‑1 (MQ=255) tGCGGTTTGCGAAGTTTGGAGTCGGCGATGACCTCCATCGATTTCATTGTCTTTTGCGTGTTCTGGACTCTTGCCATCTTACTACGTATCTCTTTTGCGCCGCCCATGACCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAgg < 2:441448/143‑1 (MQ=255) tGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAgg > 2:5290/1‑143 (MQ=255) gCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGc < 1:610826/143‑1 (MQ=255) gCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGc > 2:402756/1‑143 (MQ=255) gCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGc > 2:1019534/1‑143 (MQ=255) cgagtgaCGCATTTTGGATGCGGCGACCATCTCCAGCGCTTTAGTGATCTTTTGCGTGTTCTCGACGCTGGCGATCTTACTACGTAACTCTTGTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCa < 2:1209873/137‑1 (MQ=255) gATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTGTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTACTCAATGCCTTGCTGCCTGCCCCAACGcca > 2:1182942/1‑141 (MQ=255) aTTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCAGGGGCTTCCCCTTAATGCCTTGCGGCCTGCCCCAAGGCGAg > 2:958486/1‑143 (MQ=255) ttACGCATTTTGGAAGCGGCGACCATCTCCAGCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCTTGCCTTAGGGCAGgcc < 1:1184343/143‑1 (MQ=255) tACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCTTGCCTTAGGGCAGgccg < 2:566762/143‑1 (MQ=255) aCGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAgccgc < 1:1095904/143‑1 (MQ=255) gCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCCTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCa < 2:157913/143‑1 (MQ=255) gCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGAGCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCa < 1:1266035/143‑1 (MQ=255) aTTTTGGAGGCGGCGACCATCCGCATCGCTTTAGTGTTCGTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGa < 2:1075193/143‑1 (MQ=255) aTTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTATCCTGACTGCCTTCAAGCCTGCGCTAAGGCAGgccgcaggc > 1:533143/1‑139 (MQ=255) ttttGGAAGCGGCGACTGTCTCCATCGCTTTAGTGATCGTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGAc < 1:995271/143‑1 (MQ=255) gcggcgACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAg < 1:1182942/143‑1 (MQ=255) cggcgACCATCTCCATCGCTTTAGTGATCTTTTGCGAGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCCGACGTTACCAgg > 1:829428/1‑143 (MQ=255) cgACCATCTTCATCGCTTTAGTGATCTTTTGCGTGTGCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGAtt < 2:1020475/143‑1 (MQ=255) cacctctATCGCTTTAGTGATCTTTTGCGTGTGCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCGGGCAGACGTTACCAGGATTGGGt < 2:1262663/140‑1 (MQ=255) ctcTTTAGTGATCGTCTGCGTGTGCCGGACGCTGGCGATCTTCCTACGTATCTCTGTTGCGCCGGCCATGAGCTTCCCCTCAATGTCCTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGaa < 1:116996/141‑1 (MQ=255) cGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGaa < 1:393890/143‑1 (MQ=255) cGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTAGCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGaa < 2:1133168/143‑1 (MQ=255) gCTGTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAg < 1:437365/143‑1 (MQ=255) ttgaGTGATCGTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGa < 1:642420/140‑1 (MQ=255) ttAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGaa > 1:1036075/1‑143 (MQ=255) tGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGa > 2:812268/1‑143 (MQ=255) tGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGa > 1:219848/1‑143 (MQ=255) tGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGa < 1:1254293/143‑1 (MQ=255) tGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAACTTCGCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGACTCGa > 1:481318/1‑143 (MQ=255) tGAGCTTTTCCTTTTTCTGTACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGa < 1:790283/143‑1 (MQ=255) tCTTTTGCGCGTTCTGGACGCCTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGa < 1:1010362/143‑1 (MQ=255) ttttGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCACTGCCTTGCGGCCTGCCCTAAGGCACGCCGCCAGACGTTACCCGGATTGGCTTGCTTTGAAGGAATCGAGGATg > 2:537729/1‑143 (MQ=255) ttttGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCATTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTAGCAGGATTGGGTTGCTTTGAAGGAATCGCGGATg > 1:1023627/1‑143 (MQ=255) tttGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGc < 1:942842/143‑1 (MQ=255) ttGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTTAAGGAGTCGGAGATGca > 2:361319/1‑142 (MQ=255) ttGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGcc < 1:44773/143‑1 (MQ=255) tGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCt < 2:1003323/143‑1 (MQ=255) tgtTCTGGGCGCTGGCGAGCTTACTACGTTTCTCTTTTGCGCCGGCCATGAGCTGCTCCTGAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCa < 2:259990/143‑1 (MQ=255) gtTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAg > 1:528698/1‑143 (MQ=255) ttCTGGACGCTTGCGATCTTACTACGTATCTCTTTTTTTTTTTTTTTTTTCTTCTCCTCAATGCCTTGCCGCCTTTCCTTAGGCAAGCCGCCACACGTTACCCGGTTTCGGTTGTTTTGTAGGCATCGTGGATTCCTTTctcc > 2:479377/1‑140 (MQ=255) ttCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGCTGCTTCGAAGGAATCGCGGATGCCTTTCGGc > 2:555189/1‑143 (MQ=255) ttCTGGACGCTTGCCTTCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGc < 2:911176/143‑1 (MQ=255) ggACGTTTGCGAGCTTACTGCGTATCGCTGTTGCGCCGGCCAGGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCTGCCAGACTTTACCAGGATTGGGTTGCTTTGAAGGAATCGTGGATGCCTTTCGGCTTGc < 1:941441/143‑1 (MQ=255) ggACGCTTGCGTTCTTACTACGTATCTCTTTTGCGCCTGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGc < 2:1256091/143‑1 (MQ=255) ggACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGCAGGAATCGAGGATGCCTTTCAGCTTGc < 1:612055/143‑1 (MQ=255) gACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGcc > 1:171476/1‑143 (MQ=255) aCGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCt > 1:692011/1‑143 (MQ=255) cGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCtt < 1:881510/143‑1 (MQ=255) ttGCGATCTTACTACGTATCTCTTTCGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGa < 1:1014164/143‑1 (MQ=255) gtcGATCTTACTCCCTATCTCTTTTGCGCCGGCCACGAGCTCCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGAt < 2:782282/141‑1 (MQ=255) gATCTTACTCCGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTtc < 1:325375/143‑1 (MQ=255) gATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCCCCTCAATGCCTTGCGGCCTGCCCTACGGCAAGCCGCCAGACGTTACCCGGAGTGGGTTACCTTGAAGGAATCGAGGAGGCCTTTCAGCTTGCGTTGGATTtc > 2:90230/1‑143 (MQ=255) cTTACTACGTATCTCTTGTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTtcgtc < 2:246657/143‑1 (MQ=255) agtacGTATCCCTTGTGCTGCGGCCATGAGCTGCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGtt < 1:329343/141‑1 (MQ=255) tacGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGCTTGGGTTGCTTTGAAGGAATCGAGGATGCCCTTCAGCTTGCCTTCGCTTTCGTCGttct > 2:120551/1‑141 (MQ=255) tacGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGTTGt > 1:133961/1‑143 (MQ=255) tacGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGTTGt > 1:620652/1‑143 (MQ=255) cGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAAACGAGGATGGCTTTCAGCGTGCCTTCGAATTGCTCGTTTTAg > 2:497657/1‑143 (MQ=255) cGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTAAAAGCGCCGACGCGCTTTGGAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGTTGTAg > 1:292550/1‑143 (MQ=255) tctTTTGCGCCGGGCATGAGCGTCTCCTCAGGGCCTGGCGGCCGGCCCTAAGGCAAGCCGCCAGACGTGACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGTTGTAGCCACCg < 1:854677/143‑1 (MQ=255) tctTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGCTTGGGTTGCTTTGAAGGAACCGAGCACACCTTTCAGCTTTCCTTCGGTTTCGTCGTCGTACCCCCCg > 1:1210322/1‑143 (MQ=255) tctTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATGGGGTTGCTTTGAAAGAATCGAGGATGCCTTGCAGCTTGCGTTCGATTTCGTCGTGGTACCCACCg > 2:584737/1‑143 (MQ=255) cctTTTTCGCCGGCCATGAGTTTCTCCTCAATGCCTTTGCGCTTGTCCTAAGGCAAGCCGCCAGACGTTACCAGGAGTGGGTTGCTGTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGTTGTAGCCACCg < 1:858412/142‑1 (MQ=255) ttttGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTCAAGGAAACGAGGAGGCCTTTCAGCTTGCCTTCGATTTCGTCGTTGTAGCCCCCggc > 2:206333/1‑142 (MQ=255) tGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGGCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGTTGTAGCCACCGGTCTg < 2:169881/143‑1 (MQ=255) gcgcCGGTCATGGGCCTCTCGTCAGTGCCGTGCGGCCTGCCCGAAGGGGAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCTGCTTGCCTTCGATTTCGTCGTTGTAGCCACCGGTCTgg < 2:284040/143‑1 (MQ=255) gcCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGTTGTAGCCACCGGTCTGGtt < 1:402756/143‑1 (MQ=255) gCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGCTTGGGTTGCTTTGAAGGAATCGAGGCTGCCTTTCAGCTTCCCTTCCATTTCGTTGTGGCAGCCACCGGTCCGGCGGAtc > 2:712771/1‑143 (MQ=255) tGATCTTCTCCGTCACGCCTTTCGGCCTGCCCTAAGGCAACCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGTTTGCCTTCGATGTCGTCGTTGTAGCCACCGGTCTGGTTGATCTCtt < 1:1244118/143‑1 (MQ=255) tGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGTTGTAGCCACCGGTCTGGTTGATCTCtt < 1:718600/143‑1 (MQ=255) tGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGCGTTGCTTTCAAGTAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGTTGTAGCCACCGGTCTGGTTGATCTCtt < 1:479424/143‑1 (MQ=255) ggtcTTCTCCTGAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGTTGTAGCCACCGGTCTGGTTGACCTCTTg < 2:49868/140‑1 (MQ=255) ttCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGGTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGGTTTCGTCGTTGTAGCCAGCGGTCTGGTTGGTCGCTTGCAtg > 1:1046999/1‑142 (MQ=255) ctcAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGTTGTAGCCACCGGTCTGGTTGATCTCTTGCATCAACgg > 2:52022/1‑143 (MQ=255) tcgaggCCGTGCGGCCTGCCGGAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGTTGTAGCCACCGGTCTGGTTGATCTCTTGCATCAACGGa < 2:56615/138‑1 (MQ=255) tcAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGTTGTAGCCACCGGTCTGGTTGATCTCTTGCATCAACGGa > 1:682783/1‑143 (MQ=255) tcAATGCCTTGCGGCCTGCCCGAAGGGAAGCCGCCAGACGTGACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCGTGCCTTCGATTTCGTCGTTGTAGCCACCGGTCTGGTTGATCTCTTGCATCAACGGa < 2:735541/143‑1 (MQ=255) tcAATGCCTTGCGACCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGTTGTAGCCACCGGTCTGGTTGATCTCTTGCATCAACGGa < 2:305316/143‑1 (MQ=255) cAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCCTTGAAGGCATCGAGGATGCCTTTCAGCTCGCCTTCGATTTCGTCGTTGTACCCACCGCGGTTGTTGTTCTCTTGCGTCGTCGGAg > 1:157125/1‑143 (MQ=255) aaTGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGTTGTAGCCACCGGTCTGGTTGATCTCTTGCATCAACGGacc > 1:522347/1‑141 (MQ=255) aaTGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGTTGTAGCCACCGGTCTGGTGGATCTCTTGCATCAACGGAGc > 1:953494/1‑143 (MQ=255) gttgggcccTGCCCTAAGGCAAGCGGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGTATCGAGGATGCCTTTCAGCTTGCCGTCGATTTCGTCGTTGTAGCTACCGGTCTGGTTGATCTCTTGCATCAACGGAGCGTGAt < 2:636513/136‑1 (MQ=255) cgtGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGTTGTAGCCACCGGTCTGGTTGATCTCTTGCATCAACGGAGCGTGAt < 2:38374/141‑1 (MQ=255) cTTGCGGGCTGTCCTACGTCAATCCGCCCGTCGTTTCCACGATGGGGTTGCGTTGAAGGCAGCGGGGGGGCCTGGCAGGTTGCCTTCGATTTCGTCGTTGTAGCCACCGGTCTGGTTGATCTCTTGCATCAACGGAGCGTGAt < 1:318136/143‑1 (MQ=255) ttGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGTTGTAGCCACCGGTCTGGTTGATCTCTTGCATCAACGGAGCGTGATc > 1:1230858/1‑143 (MQ=255) ttGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGTTGTAGCCACCGGGCTGGTTGATCTCTTGCATCAACGGAGCGTGATc > 2:965035/1‑143 (MQ=255) tggCGGCTTGCCTTAGGGCAGGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGTTGTAGCCGCCGGTCTGGCTGATCTCTTGCATCAACGGAGCGTGATc > 2:814176/3‑143 (MQ=255) cGGCTTGCCTTAGGGCAGGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGTTGTAGCCACCGGTCTGGTTGATCTCTTGCATCAACGGAGCGTGATCACg > 1:522681/1‑143 (MQ=255) cGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGTTGTAGCCACCGGTCTGGTTGATCTCTTGCATCAACGGAGCGTGATCACg < 1:305684/143‑1 (MQ=255) gCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGTTTTAGCCACCGGTCTGGTTGATCTCTTGCATCAACGGAGCGTGATCACCGt > 1:344886/1‑143 (MQ=255) ctccccTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGTTGTAGCCACCGGTCTGGTTGATCTCTTGCATCAACGGAGCGTGATCACGGTCg < 1:1031389/140‑1 (MQ=255) cTGCCTTAAGTCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGTCTTCGATTTCGTCGTTGTAGCCACCGGTCTGGTTGATCTCTTGCATCAACGGAGCGTGATCACGGTCg < 2:321765/143‑1 (MQ=255) cTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGTTGTAGCCACCGGTCTGGTTGATCTCTTGCATCAACGGAGCGTGATCACGGTCg > 1:1105363/1‑143 (MQ=255) tGCCCTAAGGCAAGGCGGCGGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGTTGTAGCCACCGGTCTGGTTGATCTCTTGCATCAACGGAGCGTGATCACGGTCGa < 2:829428/143‑1 (MQ=255) gCCGTAAGGCACTCCGCCAGACGTCACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGTTGTAGCCACCGGTCTGGTTGATCTCTTGCATCAACGGAGCGTGATCACGGTCGAc < 2:1011815/143‑1 (MQ=255) cccTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGTTGTAGCCACCGGTCTGGTTGATCTCTTGCATCAACGGAGCGTGATCACGGTCGACg > 1:902237/1‑143 (MQ=255) ccTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGTTGTAGCCACCGGTCTGGTTGATCTCTTGCATCAACGGAGCGTGATCACGGTCGACGt > 2:1151296/1‑143 (MQ=255) ccTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGTTGTAGCCACCGGTCTGGTTGATCTCTTGCATCAACGGAGCGTGATCACGGTCGACGt > 1:769044/1‑143 (MQ=255) | CTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCAAGCCGCCAGACGTTACCAGGATTGGGTTGCTTTGAAGGAATCGAGGATGCCTTTCAGCTTGCCTTCGATTTCGTCGTTGTAGCCACCGGTCTGGTTGATCTCTTGCATCAACGGAGCGTGATCACGGTCGACGT > NC_000913/3918158‑3918437 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |