Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 4,002,398 T→C 5.1% intergenic (+22/+21) corA → / ← yigF Ni(2(+))/Co(2(+))/Mg(2(+)) transporter/DUF2628 domain‑containing protein YigF

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,002,3980TC 5.1% 457.9 / 6.0 163intergenic (+22/+21)corA/yigFNi(2(+))/Co(2(+))/Mg(2(+)) transporter/DUF2628 domain‑containing protein YigF
Reads supporting (aligned to +/- strand):  ref base T (66/85);  new base C (5/4);  total (73/90)
Fisher's exact test for biased strand distribution p-value = 5.12e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.80e-01

Only 100 of 163 total aligned reads displayed.

TGAACTTTGAGTTTATGCCAGAACTGAAGTGGAGCTTCGGCTACCCTGGCGCGATTATCTTTATGATCCTCGCGGGCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGTATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGTTAACGCCAATTAGTGCACCAA  >  NC_000913/4002258‑4002537
                                                                                                                                            |                                                                                                                                           
      ttGAGTTTATGCCAGAACTGAAGTGGAGCTTCGGCTACCCTGGCGCGATTATCTTTATGATCCTCGCGGGCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTaa                                                                                                                                     <  2:89767/143‑1 (MQ=255)
      ttGAGTGTATGTGAGAACTGGAGTGGAGCTGCGGCTACCCTGGCGCGATTATCTTTATGATCCTCGCGGGCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTaa                                                                                                                                     <  1:1105472/143‑1 (MQ=255)
      gggAGTGTATGCCAGAACTGAAGTGGGGCTTCGGCTGCCCTGGCGCGATTATCTGTAGGATCCTCGCGGGCCTGGCACCGTATCGGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTaa                                                                                                                                     <  1:910516/141‑1 (MQ=255)
       ggAGTTTGGGCCAGATCTGAAGTGGAGCTTCGCCTACCCGGGCGCGATTATCTTTATGATCCTCGCGGGCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGCCAGACTAAg                                                                                                                                    <  2:38319/142‑1 (MQ=255)
          gTTTATGCCAGAACTGAAGTGGAGCTTCGGCTACCCTGGCGCGATTATCTTTATGATCCTCGCGGGCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCa                                                                                                                                 >  1:1197497/1‑143 (MQ=255)
          gTTTATGCCAGAACTGAAGTGGAGCTTCGGCTACCCTGGCGCGATTATCTTTATGATCCTCGCGGGCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACAGGTTGATAGAGTCGAGAGCGGTGGCTTAGTCTGGCTAAGCCa                                                                                                                                 >  1:867411/1‑143 (MQ=255)
          gTTTATGCCAGAACTGAAGTGGAGCTTCGGCTACCCTGGCGCGATTATCTTTATGATCCTCGCGGGCCTGGCACCGTATCTGTACTTTAAGCGGAAGAAATGGTTGTAAAAAACGAGCGCGGTGGCTGAGTATGTCTAAACCa                                                                                                                                 >  2:893111/1‑143 (MQ=255)
          gTTTATGCCAGAACTGAAGTGGAGCTTCGGCTACCCTGGCGCGATTATCTTTATGACCCTCGCGGGCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACCGGTTGTAAAAAACGAGAGAGGTGGCTTAGCCAGACTAAGCCa                                                                                                                                 <  2:297077/143‑1 (MQ=255)
           tttATGCCAGAACTGAAGTGGAGCTTCGGCTACCCTGGCGCGATTATCTTTATGATCCTCGCGGGCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCAc                                                                                                                                >  2:122481/1‑143 (MQ=255)
           tttATGCCAGAACTGAAGTGGAGCTTCGGCTACCCTGGCGCGATTATCTTTATGATCCTCGCGGGCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCAc                                                                                                                                >  1:120068/1‑143 (MQ=255)
            ttATGCCAGAACTGAAGTGGAGCTTCGGCTACCCTGGTGCGATTATCTTTATGATCCTCGCGTGCCTGGCACCGTATCTGTACTTTAAGCGGACGAACTGGTTGTAAAAAACGATAGCGGTGTCTTAGTCTGGCTAAGCCAcc                                                                                                                               <  2:275353/143‑1 (MQ=255)
             tATGCCAGAACTGAAGTGGAGCTTCGGCTACCCTGGCGCGATTATCTTTATGATCCTCGCGGGCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGCGACTTAGTCTGGTTAAGCCACCt                                                                                                                              >  1:470096/1‑143 (MQ=255)
                gCCAGAACTGAAGTGGAGCTTCGGCTACCCTGGCGCGATTATCTTTATGATCCTCGCGGGCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCAACTGtt                                                                                                                           >  1:404558/1‑143 (MQ=255)
                 ccAGAACTGAAGTGGAGCTTCGGCTACCCTGGCGCGATTATCTTTATGATCCTCGCGGGCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTa                                                                                                                          <  1:565694/143‑1 (MQ=255)
                  cAGAACTGAAGTGGAGCTTCGGCTACCCTGGCGCGATTATCTTTATGATCCTCGCGGGCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTAt                                                                                                                         >  1:740589/1‑143 (MQ=255)
                  cAGAACTGAAGTGGAGCTTCGGCTACACTAGCGCGATTATCATTATGATATTCGCGGGCCTGACACCGTATCTGTACTTTAAGCGGAAGAACTAATTGTAAAAAACGAAAACAGTAGATTAATCTGACTAAGCTACCTgaaat                                                                                                                         >  2:1044758/1‑139 (MQ=255)
                      accgAAGTGGCGCCTCGGCGACCGGGGCGCGATTATCTGTATGATCCTCGCGGGCCTGGCACCGTATGTGTACTTTAAGCGGAAGAAGTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCaa                                                                                                                     <  2:756951/140‑1 (MQ=255)
                       gtGAAGTGGTGCTTCGGCTACCCTTGCGCGATTATCTTTATGATCCTCGCGGGCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCaaa                                                                                                                    <  2:988935/142‑1 (MQ=255)
                       cggatggggAGCTTCGGCGGCGCTGGCGCGATTATCTTGATGATCCTCGCGGGCCTGGCACCGTATCGGTACTTTAAGCGGAAGGACTGGTTGTAAAAAGCGAGGGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCaaa                                                                                                                    <  2:400052/136‑1 (MQ=255)
                       cggAAGTGGAGCTTCGGCTACCCTGGAGCGATTATCTTTATGATCCTCGCGGGCCTGGCACCGTATCTGTAATTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCaaa                                                                                                                    <  1:78470/141‑1 (MQ=255)
                       cTGAAGTGGAGCTTCGGCTACCCTGGCGCGATTATCTTTATGATCCTCGCGGGCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCaaa                                                                                                                    <  1:421956/143‑1 (MQ=255)
                          aaGTGGAGCTTCGGCTACCCTGGCGCGATTATCTTTATGATCCTCGCGGGCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGc                                                                                                                 >  1:1021390/1‑143 (MQ=255)
                            gTGGAGCTTCGGCTACCCTGGCGCGATTATCTTTATGATCCTCGCGCGCCTGGCACCGTAACTGTACTTTAACCGACAGAACTGGTTCTAAAAAAAGAGCGCAGTGGCTAAGTCCGACTAAGCCACCTGTTAATAAAAGGcgc                                                                                                               >  2:965720/1‑141 (MQ=255)
                             tGGAGCTTCGGCTACCCTGGCGCGATTATCTTTATGATCCTCGCGGGCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTcc                                                                                                              >  1:820956/1‑143 (MQ=255)
                               gcgggtCGGCTACCCTGGCGCGATTATCTTTATGATCCTCGCGGGCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAg                                                                                                            <  1:508187/138‑1 (MQ=255)
                               gAGCTTCGGCTAACCTGGCGCGATTATCTTTATGATCCTCGCGGGCCTGGCACAGGATGTGTACTTTAAGCGGAAGCACTGGTTGTAAAGAACGAGAGCAGTGGCTTAGGCTGACGAAGCCACATAGTACTCAAAGGCTCCAg                                                                                                            >  2:1140803/1‑143 (MQ=255)
                               gAGCCTCGGCTACCCTGGCGCGATTATCTTTATGATCCTCGCGGGCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCCAAGCCACCTGTTATTCAAAGGCTCCAg                                                                                                            >  1:796579/1‑143 (MQ=255)
                                 gCTTCGGGTACCCTGGCGCGATTATTTTTATGATCCTCGCGGGCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGt                                                                                                          <  1:154162/143‑1 (MQ=255)
                                    ccGGCGACCCTGGCGCGATTATCTTTATGATCCTCGCGGGCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGTAtt                                                                                                       <  1:162488/142‑1 (MQ=255)
                                     cGGCTAGCCTGGCGCGATTATCTTTATGATCCACGCGGGTCTGGGACCGTATCGGTACTGTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGTAttt                                                                                                      <  2:614755/143‑1 (MQ=255)
                                             gtGGCGCGATTATCTTTATCATCCTCGTTACCCTGTCCCCTTATGTGTACGTTACGCGGAAAAACTGATTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGTATTTAACCCttt                                                                                              <  2:408122/142‑1 (MQ=255)
                                             cTGGCGCGATTATCTTTATGATCCTCGCGGGCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGTATTTAACCCttt                                                                                              >  1:1216967/1‑143 (MQ=255)
                                             cTGGCGCGATTATCTTTATGATCCTCGCGGGCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGTATTTAACCCtct                                                                                              >  2:197220/1‑141 (MQ=255)
                                              tGGCGGGATTATCTTTATGAGCTTCGCGGGCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGTATTTAACCCtttt                                                                                             <  2:1080088/143‑1 (MQ=255)
                                                gcgcCATTATCTCTATGATCCTCGCGGGCCTGGCACCGGATCGGTACTTTACGCGGAAGAACTGGTTGCAAACAACGAGAGCGGTGGCTTAGTCTGGCTGCGCCTCCTGTTATTCAAAGGCTCCAGGACTTTAGCCCttttcc                                                                                           <  2:162440/143‑3 (MQ=255)
                                                   cgATTATCTTTATGATCCTCGCGGGCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGTATTTAACCCTTTTACctc                                                                                        >  1:728539/1‑143 (MQ=255)
                                                    gATTATCTTTATGATCCTCGCGGGCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGTATTTAACCCTTTGACctct                                                                                       >  1:1118422/1‑143 (MQ=255)
                                                      ttATCTTTATGATCCTCGCGGGCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGTATTTAACCCTTTTACCTCttt                                                                                     >  2:1124064/1‑143 (MQ=255)
                                                      ttATCTTTATGATCCTCGCGGGCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGTATTTAACCCTTTTACCTCttt                                                                                     >  1:987286/1‑143 (MQ=255)
                                                       gctggttAGGAGCCTGGCGGGCCGGGGACCGTATCTGGGCGGTAGGCGGAAGAACTGGTTGTAAAACGCGAGAGCGGTGGCGTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGTATTTAACCCTTTTACCTCTTtc                                                                                    <  2:580251/138‑1 (MQ=255)
                                                       gagcTTTAGGATCCTCGCGGGCGTGGCACCGTAGCGGTACTTGAAGCGGAAGAACTGGTTGTAAGGTGCGTGCCCGCTTTCTCAGTCTGGCTAAGCCACCTGTTATGCAAAGGCTCCAGGTATTTAACCCTTTTACCTCTTtc                                                                                    <  1:179771/140‑1 (MQ=255)
                                                           tttATGATCCTCGCGGGCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGTATTTAACCCTTTTACCTCTTTCTCAt                                                                                <  1:633253/143‑1 (MQ=255)
                                                           tttATGATCCTCGCGGGCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCAGTAGCTTAGGCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGTATTTAACCCTTTTACCTCTTTCTCAt                                                                                >  2:1039240/1‑143 (MQ=255)
                                                           tttATGATCCTCGCGCGCCTGGTACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGTATTTAACCCTTTTACCTCTTTCTCAt                                                                                >  2:640315/1‑143 (MQ=255)
                                                           gttATGATCCTCGCGGGCCTGGCACCGTATCTGTACTGTAAGCGGAAGAACTGGTTGTAAAAGACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGTATTTAACCCTTTTACCTCTTTCTCAt                                                                                <  2:73709/142‑1 (MQ=255)
                                                            ttATGATCCTCGCGGGCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGTATTTAACCCTTTTACCTCTTTCTCATa                                                                               <  1:688064/143‑1 (MQ=255)
                                                                gATCCTCGCGGGCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCCGATGTAAGGCAAAGGCTCCAGGTATTTAACCCTTTTACCTCTGTCTCAtcgcac                                                                           >  1:537807/1‑138 (MQ=255)
                                                                 aTCCTCGCGGGCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAGCGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGTATTTAACCCTTTTACCTCTTTCTCATAGAAcc                                                                          >  1:321503/1‑143 (MQ=255)
                                                                  tCCTCGCGGGCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGTATTTAACCCTTTTACCTCTTTCTCATAGAACCa                                                                         >  1:1019788/1‑143 (MQ=255)
                                                                  tCCTCGCGGGCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGTAGTTAACCCTTTTACCTCTTTCTCATAGAACCa                                                                         >  2:46475/1‑143 (MQ=255)
                                                                   ccTGGCGGGCTTGTCACCGTATCCGTACGTTAAGCGTATGCACTGCTTGTACAAAACGAGAGCGGTGGCTTACTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGTATTTAACCCTTTTACCTCTTTCTCATAGAACCAt                                                                        <  2:476955/143‑1 (MQ=255)
                                                                   ccTCGCGGGCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGTATTTAACCCTTTTACCTCTTTCTCATAGAACCAt                                                                        >  1:11126/1‑143 (MQ=255)
                                                                     tCGCGGGCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGTATTTAACCCTTTTACCTCTTTCTCATAGAACCAttt                                                                      >  1:359625/1‑143 (MQ=255)
                                                                         gggCCGTGCACCGTTTCTGTACTTGAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAACGCTACACGTATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTATTc                                                                  <  2:529322/143‑1 (MQ=255)
                                                                           gCCTGGTACCGTATCTGTACTGTAGGCGGAAGAGCTGGTTGTACAAAACGCGAGCGGTGGCTTAGTCTGGCTACGCCACCTGTTATTCAAAGGCTCCAGGTATGTAACCCTTTTACCTCTTTCTCATAGACCCATTTGTTCgt                                                                <  2:520002/143‑1 (MQ=255)
                                                                            ccTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGTATTTAACCCTTTTACCGCTTTCTCATAGAACCATTTGTTCgtg                                                               <  1:245297/143‑1 (MQ=255)
                                                                             cTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGTATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCgtgt                                                              >  1:1075639/1‑143 (MQ=255)
                                                                              tGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGTATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGtt                                                             >  1:1076444/1‑143 (MQ=255)
                                                                               ggCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGTATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTa                                                            >  1:1048604/1‑143 (MQ=255)
                                                                                gCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGTATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTac                                                           >  1:894802/1‑142 (MQ=255)
                                                                                gCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGTATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTaa                                                           <  1:889533/143‑1 (MQ=255)
                                                                                gCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGTATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTaa                                                           >  1:1031877/1‑143 (MQ=255)
                                                                                   ccGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGTATTTAACCCTTTTACCTCTTTCTCATATAACCATTTGTTCGTCTTAACAg                                                        >  2:324748/1‑143 (MQ=255)
                                                                                   ccGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGTATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAg                                                        >  1:336719/1‑143 (MQ=255)
                                                                                       atttGTACTTTTAGCGGAAGAACTGGTTGTAAAAATCGAGATCGGTGGCTTAGTCTGGCTAAGCCATCTGTTATTCAAAGGCTCCAGGTATTTAACCCTTTTACCTCTTTCTCATTGAACCATTTGTTCGTGTTAACAGCAAc                                                    <  2:713582/140‑1 (MQ=255)
                                                                                       aTCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGTATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAAc                                                    <  2:955956/143‑1 (MQ=255)
                                                                                          tGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGTATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATa                                                 >  1:961722/1‑143 (MQ=255)
                                                                                            tACTTTATGCTGATGAGCTGGTTGTAAAGTTCGACAGCTGTGGCTTAGTCTTGCTAAGCCACGTGGTATTTCCAGGTCCCAGATATTTAACTCTTTTTCCTGTGTCTCATTGAACCATTTGTTCGTGTTAACAGCAACATAgg                                               <  2:211796/143‑1 (MQ=255)
                                                                                             aCTTGAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGTATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGgc                                              <  1:127438/143‑1 (MQ=255)
                                                                                               tttAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGTATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGgctg                                            <  2:175099/143‑1 (MQ=255)
                                                                                                  aaGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGTATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTa                                         <  1:64107/143‑1 (MQ=255)
                                                                                                      gggagatCTGGGTGTAAACAACGCGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGCTATTTAAACCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCACCATAGGCTGCTACTGc                                     <  2:460838/140‑1 (MQ=255)
                                                                                                         agaaCTGGTTGTCAACAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGTATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAAt                                  <  1:11605/143‑1 (MQ=255)
                                                                                                              tGGTTGTAAGAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGTATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCa                             <  2:977433/143‑1 (MQ=255)
                                                                                                               ggTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGTATTTAACCCTTTTACGTCTCTGGCCAATAACCGTTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAg                            >  1:932153/1‑143 (MQ=255)
                                                                                                                gTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGTATTTCACCCCTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTCACAGCCACATAGGCTGCTACGGCACTTCCCAGa                           >  2:250273/1‑143 (MQ=255)
                                                                                                                gTTGTAAAAAACGAGAGCGGTGGCTTAGCCTGGAATAGCTACCTGTTATTCAAAGGCTCCAGGTATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGa                           >  2:394590/1‑143 (MQ=255)
                                                                                                                 ttGTAAAAAACGAGAGCGGTGGCTTAGTCCGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGTATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGaa                          <  1:231335/143‑1 (MQ=255)
                                                                                                                  tGTAAAAACCGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGTATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAAt                         <  2:415693/143‑1 (MQ=255)
                                                                                                                  tGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGTATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAAt                         >  2:47209/1‑143 (MQ=255)
                                                                                                                    tAAAAAACGAGTGCGGTCGCTTAGTCTGGCTAAGCCACCTGTTACTCAAACGCTCCAGGTATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGACTGt                       <  1:882350/143‑1 (MQ=255)
                                                                                                                        aatcGAGTGCGGTGGCTTAGTCTGGCTAAGCCACCTCTTATTCAAAGGCTCCAGGTAGTTAATCTTCGCAGCGCGGTCTCAGAGAGCCATTTGTTCGTGTTAACAGCAACATAGGTTGCTAAGGCAATTCCCAGAATGTTAAc                   <  2:384746/140‑1 (MQ=255)
                                                                                                                        aaaCGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGTATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGTTAAc                   <  1:768845/143‑1 (MQ=255)
                                                                                                                         aaCGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGTATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGTTAACg                  >  2:859859/1‑143 (MQ=255)
                                                                                                                         aaCGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGTATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGTTAACg                  <  1:984027/143‑1 (MQ=255)
                                                                                                                          aCGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGTATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGTTAACGc                 <  2:867411/143‑1 (MQ=255)
                                                                                                                          aCGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGTATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGTTAACGc                 <  1:1045286/143‑1 (MQ=255)
                                                                                                                           cGAGCGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAATGGCTCCAGGTATTTAACCCTTTTACCTCTTCCTCATAGAACCATTTGTTCGTGTTAACATCAACATAGGCTGCTACGGCAATTCCCAGAATGTTAACGcc                <  2:704597/143‑1 (MQ=255)
                                                                                                                           cGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGTATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGTTAACGcc                >  1:923117/1‑143 (MQ=255)
                                                                                                                             agagCCGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGTATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGTTAACGCCaa              <  2:514260/143‑1 (MQ=255)
                                                                                                                              gagCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGTATTTAACCCTTTTACCTCTTTCTCATCGACCCATTTGTTCGTGTTAACAGCAACCTACGCTGCTACGGCAATTCCCAGACTGTTCACACCaac             >  2:690867/1‑142 (MQ=255)
                                                                                                                              aacaggTGGCTTAGCCAGACTAAGCCACCTGTTATTCAAAGGCTCCAGGTATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGTTAACGCCAAt             >  2:239601/5‑143 (MQ=255)
                                                                                                                               agCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGTATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGTTAACGCCAAtt            >  1:475861/1‑143 (MQ=255)
                                                                                                                                gCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGTATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGTTAACGCCAATTa           <  1:1189531/143‑1 (MQ=255)
                                                                                                                                gCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGTATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGTTAACGCCAATTa           <  1:216918/143‑1 (MQ=255)
                                                                                                                                caggTGGCTTAGCCAGACTAAGCCACCTGTTATTCAAAGGCTCCAGGTATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGTTAACGCCAATTa           <  1:1161060/141‑1 (MQ=255)
                                                                                                                                 cGGTGGCTTAGTCTGGCTACGCCTCCTGTTATTCAAGGGCTCCAGGGATTTAACCCTTTTACCTCTTTCTCAGCGAGCCGGTTGTGCGTGTTAACAGCAACAGAGGCTGCTACGGCTATTCCCAGAATGTTAACGCCAATTAg          <  2:150733/143‑1 (MQ=255)
                                                                                                                                   gTGCCTTAGTCCGTCTAAGCCACCTGTTATTCAAAGGCTCCAGGTATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGTTAACGCCAATTAGTg        <  1:307654/143‑1 (MQ=255)
                                                                                                                                     ggCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGTATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGTTAACGCCAATTAGTGCa      <  2:797324/143‑1 (MQ=255)
                                                                                                                                         tAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGTATTTAACCCTTTTACCTCTTTCTCATAGACCCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGTTAACGCCAATCAGTGCACcaa  >  2:811050/1‑143 (MQ=255)
                                                                                                                                            |                                                                                                                                           
TGAACTTTGAGTTTATGCCAGAACTGAAGTGGAGCTTCGGCTACCCTGGCGCGATTATCTTTATGATCCTCGCGGGCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGTATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGTTAACGCCAATTAGTGCACCAA  >  NC_000913/4002258‑4002537

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: