| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,060,261 | G→T | 6.8% | intergenic (+31/‑186) | bipA → / → yihL | ribosome‑dependent GTPase, ribosome assembly factor/putative transcriptional regulator YihL |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,060,261 | 0 | G | T | 6.8% | 397.7 / 15.6 | 151 | intergenic (+31/‑186) | bipA/yihL | ribosome‑dependent GTPase, ribosome assembly factor/putative transcriptional regulator YihL |
| Reads supporting (aligned to +/- strand): ref base G (75/64); new base T (7/3); total (82/69) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.13e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.68e-01 | |||||||||||
Only 100 of 154 total aligned reads displayed.
CATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTTTTTGGCGT > NC_000913/4060119‑4060402 | cATCGATGCAGCCGAACTGGTAGAAGTGGCTCCGACCGCTATCCGTATTCGTAAACGTCACCGGACGGAAAACGATCGTCGCCGCGCGAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAg < 2:535429/143‑1 (MQ=255) gttgatggtGACGAACTGGTAGCAGTCACTCCGCCCTCTAGCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGc < 2:1144153/140‑1 (MQ=255) aTCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGc > 1:811522/1‑143 (MQ=255) aTCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGAGCGTCGCCGCGCCAACCGCGCACCGAAAGACGACGAATTGCGGGGTTTGGTCATAAAAAACCTGGCAGc > 2:745201/1‑143 (MQ=255) tCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCg < 1:1017531/143‑1 (MQ=255) cGATGATGACGAACTGGTAGAAGTGACTCCGGCCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAGAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTgcgagcga > 1:327215/1‑143 (MQ=255) cGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGGAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGa > 1:164255/1‑143 (MQ=255) gatgatGACGAACTGGTAGAAGTGACTCCGACCTCTCTCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGAt > 1:829190/1‑143 (MQ=255) gatgatGACGAACTGGTAGAAGTGACTCCGACCGCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGAt < 1:87560/143‑1 (MQ=255) gatcatGACGAACTGGTAGAAGTGCCTCCGACCGCGATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGTGAt < 1:991641/143‑1 (MQ=255) gaCGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCATCGCTGGCAgg < 2:736712/143‑1 (MQ=255) gaCGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAgg < 2:1162885/143‑1 (MQ=255) gaCGAACTGGTAGAAGTGACTCCGACCTCTATCCGAAATCTTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCATCGCTGGCAgg < 1:1204963/143‑1 (MQ=255) gAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑ttt > 1:482387/1‑143 (MQ=255) gTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑ttttttttt > 1:423193/1‑143 (MQ=255) aGAAGCGTCTCCGCCCCCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGAGCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGc < 2:762541/143‑1 (MQ=255) gTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAACCCTGCCAGCGATGCCCGG‑GTTTTTTTTGCCTGt > 1:102693/1‑143 (MQ=255) tGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGCTGGCAGG‑TTTCTTTTTGCCTGTc > 1:5777/1‑143 (MQ=255) cTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAACAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTg > 1:371666/1‑143 (MQ=255) tCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAACACGATCGTCGCCGCGCCAACCGCGCACCGCAAGACGATTAATTTCGGTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGACTGACGTGa > 2:617411/1‑143 (MQ=255) tCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACTGCGCACCGAAAGACGATTAATTTCGTTTTTTAGACATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGACGTgt > 2:465643/1‑142 (MQ=255) tCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGa > 1:749534/1‑143 (MQ=255) cGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTCCCAGCGCTGGCAGG‑TTTTTTTTTGCCTGTCGTGAgc > 2:1174318/1‑143 (MQ=255) cGACCTCTATCCGTATTCGTAAACGCCACCTGACGGAACACGATCGTCGCCGCGCCAACCGCGCACCGGAAGGCGAGTAATTTCGCGCCTTAGACATAAACCACCTCCCCGCGCTGGCCGG‑TGTTCTTTCGCCTGTCgcgcgc > 2:442623/1‑138 (MQ=255) gACCTCTATCCGTCTTCGTAAACGTCACCTGACGGAACACGATCGTCGCCGCGCCAACCGCGCACCGCGAGGCGATTGCTTTCGTTTTTTCGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAgcg < 2:1114036/143‑1 (MQ=255) gACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAgcg > 2:643098/1‑143 (MQ=255) gACCTCCATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCTAAAGACGAGTAATTTCGTGTTTTAGTCATAAAAAGCCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAgcg < 1:216293/143‑1 (MQ=255) gctctAGCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACGTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGca < 2:938731/142‑1 (MQ=255) ccTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGca < 1:766972/143‑1 (MQ=255) ctctATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCATGAGCGcac < 2:811522/143‑1 (MQ=255) tctATCCGTACTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGCTTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGcaca < 1:631919/143‑1 (MQ=255) ctATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCacac > 1:955468/1‑143 (MQ=255) tATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑CTTTTTTTTTTCTTTTGTTAACGCACAcc > 2:11056/1‑143 (MQ=255) tCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCCCCGAAAGACGAGTAATGTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTGTTGTTTGCCTGTCGGGAGCGCACACCaa > 2:360462/1‑143 (MQ=255) tCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGTTTTTTTTTTGCCTGTCGTGAGCGCACCCCa > 1:1248442/1‑143 (MQ=255) gggaTTCGTAACCGTCACCTGACGGAAAACGATCGGCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTGTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATg < 2:275701/140‑1 (MQ=255) gTATTCGTAAACGTCACCTGACTGAAAACGCTCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGc < 2:362459/143‑1 (MQ=255) gTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTACTTTCGGTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑CTTTTTTTTGACTACAGTGAGCCCACACCAATGc > 2:491753/1‑143 (MQ=255) tATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCg > 1:429932/1‑143 (MQ=255) ttCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGCTTAATCTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCCGTCGTGAGCGCACACCAATGCGAg > 2:238404/1‑143 (MQ=255) cGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATGTCGTTTTTTAGTAATAAAAAACCTGCCAGCGATGGCAGG‑GTTTTTTTTGCCTGGCGTGAGCGCACACCAATGCGAGTa > 2:67536/1‑143 (MQ=255) gTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTAt > 1:740138/1‑143 (MQ=255) gTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATACGAGTAt > 1:608026/1‑143 (MQ=255) aCCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTtat > 1:592692/1‑143 (MQ=255) aCCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTtat < 1:1128871/143‑1 (MQ=255) ccTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTtata > 1:1244183/1‑143 (MQ=255) cTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTGCCTTATaa > 1:911738/1‑143 (MQ=255) cTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATaa < 2:450597/143‑1 (MQ=255) tGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCtgtcagt > 1:297373/1‑137 (MQ=255) gACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGt < 2:471678/143‑1 (MQ=255) gACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCATGAGCGCACACCAATGCGAGTATCTCCCTTATAAGt > 1:1205882/1‑143 (MQ=255) gACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTGCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGt < 2:688951/143‑1 (MQ=255) ggAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTCTACGTCtg > 2:813501/1‑143 (MQ=255) ggAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCtg < 1:695859/143‑1 (MQ=255) ggAAAACGATCGTCGCCGCGCCAAACGCGCACCGAAAGACGATTAATTACGATTTTTAGTCATAAAAAACATGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCATGAGCGCACACCAATGCGAGTATCTCATTTATAAGTCtg > 2:1070547/1‑143 (MQ=255) gataaCGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCtgt < 2:1134995/140‑1 (MQ=255) aaaCGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTgg > 1:906147/1‑143 (MQ=255) aaaCGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCCTGAGCGCACACCAATCCGCGTAGCTCCCTTATAAGTCtgtcg > 1:1078785/1‑141 (MQ=255) aaCGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTCATTTCGTTTTTTACTCATCAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTCAGCGCACACCAATGCGAGGAGCTCCCTTATCAGTCTGTGGt > 2:625198/1‑143 (MQ=255) aCGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCGGACAGCGATGGCAGGCTTTTTGTTTGCCTGGCGTGAGCGCACACCAATGCGAGTATCTCCCTGATAAGGCTGTggg < 1:273534/143‑2 (MQ=255) gATCGACGCCGCGCCAACCGCGCACCGAAAGACGAATAATTACGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTAc < 1:225705/143‑1 (MQ=255) aTCGTCGCCGCGCCAGCCGCGAACCGGAGGCCGATTAATTTCGTTTTTTAGTCATAAAAAGCCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACg < 2:422889/143‑1 (MQ=255) tcgtcgCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTCATACGTCTGCGGTTACGt > 1:497661/1‑143 (MQ=255) gtcgCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTGTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATACGTCTGTGATTACGTcc > 1:1169648/1‑142 (MQ=255) gtcgCCGCGCCAACCGAGCACTGAAAGAAGATTAATTTCGTTTTTTAGTCATACACCACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTTAGCGCAAAACAATGACAGGATTTCGCTTCTTAGTCGTTGGTTGCGtga > 2:943560/1‑141 (MQ=255) ccgcGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TGTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATag > 1:803987/1‑143 (MQ=255) aCCGCGGACCGAAAGACGATTGAGTTGGTTTTTTAGTTACAAAGAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCttt < 2:1237661/143‑1 (MQ=255) aCCGCGCACCGATAGACGATTAATTCCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCttt < 2:185835/143‑1 (MQ=255) gccgcACGGAAAGCCGCTTCACTTCTGTGTTTAGTCATAAAGAACCTGCCGGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCAGACCAATGCTAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGt < 2:200741/141‑1 (MQ=255) gcgcACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTc > 2:1084307/1‑143 (MQ=255) gcgcAACGAAAGACGATTAATTTCGATTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAAGGCGAGTATCTGCCTTATAAGGGTGGGGTTACGTCAAAAGAAAGCATTgac > 2:413028/1‑141 (MQ=255) ccGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTACAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAAt < 1:1143116/143‑1 (MQ=255) aaaGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTAt < 1:643098/143‑1 (MQ=255) aGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCt < 2:164255/143‑1 (MQ=255) aGACGATTAATTTCGTGTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGGCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCt > 1:1081894/1‑143 (MQ=255) gACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTg < 1:265449/143‑1 (MQ=255) gATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCGTTGTCACAATTATCTGCaa > 1:897779/1‑143 (MQ=255) aTTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAg > 2:725976/1‑143 (MQ=255) tAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGGCTGTGGTTACGTCAATAGAGAGCTTAGTTACAATTATCTGCCAAGt > 2:26775/1‑143 (MQ=255) aTTTCGTTTTTTAGTCATAAAAAGCCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCa < 2:219273/143‑1 (MQ=255) tttCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGACGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTAc > 2:247588/1‑104 (MQ=255) tttCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGACGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTAc < 1:247588/104‑1 (MQ=255) ttAGTCGTACAAAACCTGCCAGCGATGGCCGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTa < 2:410017/143‑1 (MQ=255) gttagaaagaaCCAGGCACCGCTGTCAGG‑TTTTTTTTTGCCCGTCGTGAGCGGACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAAtt < 2:200177/138‑1 (MQ=255) gTCATAACAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAAtt < 1:704321/143‑1 (MQ=255) tCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTg < 1:1160940/143‑1 (MQ=255) aaaaaaaaaCCTGCCATCGCTGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACTATTATCTTCAAAGTCATACGCCCTTCATTGc > 1:565941/4‑143 (MQ=255) aaaaaaaaaCCTGCCATCGCTGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGc > 1:532474/4‑143 (MQ=255) aaaaaaaaaCCTGCCATCGCTGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTAAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGc > 1:536782/4‑143 (MQ=255) aTAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGct > 2:678329/1‑143 (MQ=255) aaaCCTGCCATCGCTGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCACACGGCGTTCATTGctttctt > 1:469631/1‑143 (MQ=255) aaCCTGCCATCGCTGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATCCGGCTGTGGTTACGGCGATAGAGAGCGTTGTCACAATGATCTGCCGCGTCATACGGCGTCAATGGccttctta > 2:917987/1‑142 (MQ=255) cTGCCAGCGATGGCAGG‑TTTTTTTTGGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGGCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCtttttt < 1:990812/143‑1 (MQ=255) cTGCCAGCGATGGCAGG‑TTTTTTTGTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCtttttt < 1:621851/143‑1 (MQ=255) tGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTTTTTg < 1:694094/143‑1 (MQ=255) tGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTTTTTg < 2:906147/143‑1 (MQ=255) ccAGCTATGGCAGG‑TTTTTTTTTGCCTGTTGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTTTTTGgc < 2:657761/143‑1 (MQ=255) aGCGATGGCAGG‑TTTTTTTTTTTCTTTTTTTATCTCACATCATTGCGATTATTTTTCTTTTTATTTTTTTGTTTCTTCTATTGTTTGCTTTGTCACTATTATCTGCTATTTCATTCGCCTTTAATTGTTTTCTTTTTTTgcgt > 2:285705/1‑143 (MQ=255) aGCGATGGCAGG‑TTTTTTTTTTCTTTTCGTCAGCGCACACCAATGCGAGTATCTCCCTTTTAAGTTTGTGGTTACGTCACTACTGAGCTTTGTCCCAATTATATGCAACCTCATACGCTGGTAATTGCTGTCTGTTTTggtgc > 2:936197/1‑140 (MQ=255) aGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTTTTTGgcgt < 1:622871/143‑1 (MQ=255) | CATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTTTTTGGCGT > NC_000913/4060119‑4060402 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |