| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,060,264 | A→C | 9.4% | intergenic (+34/‑183) | bipA → / → yihL | ribosome‑dependent GTPase, ribosome assembly factor/putative transcriptional regulator YihL |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,060,264 | 0 | A | C | 9.4% | 340.2 / 19.3 | 143 | intergenic (+34/‑183) | bipA/yihL | ribosome‑dependent GTPase, ribosome assembly factor/putative transcriptional regulator YihL |
| Reads supporting (aligned to +/- strand): ref base A (62/62); new base C (13/4); total (77/66) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.72e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.57e-01 | |||||||||||
Only 100 of 146 total aligned reads displayed.
CGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑T‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTTTTTGGCGT > NC_000913/4060122‑4060402 | cGATGATGACGAACTGGTAGAAGTGACTCCGGCCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAGAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTgcgagcga > 1:327215/1‑143 (MQ=255)cGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGGAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGa > 1:164255/1‑143 (MQ=255) gatgatGACGAACTGGTAGAAGTGACTCCGACCTCTCTCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGAt > 1:829190/1‑143 (MQ=255) gatcatGACGAACTGGTAGAAGTGCCTCCGACCGCGATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGTGAt < 1:991641/143‑1 (MQ=255) gaCGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCATCGCTGGCAgg < 2:736712/143‑1 (MQ=255) gaCGAACTGGTAGAAGTGACTCCGACCTCTATCCGAAATCTTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCATCGCTGGCAgg < 1:1204963/143‑1 (MQ=255) gaCGAACTGGGAGAAGTGACTCCGACGTCTATCCGTATTCGTAAACGTCACCTGAGGGGAAACAATCGCCGCGGCGCCAACCGCGCACCGACAGACGATAAAGTGCGGGGTTTAGTAATAAAAAAGATGCCAGCGATGCCAgg > 2:925203/1‑143 (MQ=255) aCGAACTGGTAGAAGTGACTCCGACCTCTAGCCGTATTCGTAAACGTCACCTGACGGAAAGCGATCGGCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑t < 1:625036/143‑1 (MQ=255) gAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAGCCTGCCAGCGCTGGCAGG‑t‑tt > 1:9196/1‑143 (MQ=255) tGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGGCGGAAAACGCTCGTCGCCGCGCCAACCGCGCACCGCAAGACGAATAAGTGCGTTGTTGAGCCATACAAAACCTGCCAGCGTTGCCAggatgcttt > 2:833352/1‑136 (MQ=255) gTAGAAGTGCCTCCGACCTTTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑t‑tttttttt < 2:451528/143‑1 (MQ=255) gTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑t‑tttttttt > 1:423193/1‑143 (MQ=255) tAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCCCGCACCGAATGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCATCGCTGGCAGG‑t‑tttttatga < 2:18287/143‑5 (MQ=39) aGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑T‑TTTTTTTTGc < 2:424409/143‑1 (MQ=255) aaGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑T‑TTTTTTTTGCCt > 1:552485/1‑143 (MQ=255) gTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAACCCTGCCAGCGATGCCCGG‑G‑TTTTTTTTGCCTGt > 1:102693/1‑143 (MQ=255) tGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGCTGGCAGG‑T‑TTCTTTTTGCCTGTc > 1:5777/1‑143 (MQ=255) tCCGACCTCTATCCGTATTCGTACACGTCACCTGACGGAAAACGATCGTCACCGCCCCAACGCAGCACCGAAAGACGACTAATTTCGTTTTTGAGTCTTCAAAAACGTGCCAGGCCACGCAAG‑T‑CTTTTTTTGCCGGTCgcca > 2:420771/1‑140 (MQ=255) tCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAACACGATCGTCGCCGCGCCAACCGCGCACCGCAAGACGATTAATTTCGGTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑T‑TTTTTTTTGACTGACGTGa > 2:617411/1‑143 (MQ=255) tCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACTGCGCACCGAAAGACGATTAATTTCGTTTTTTAGACATAAAAAACCTGCCAGCGATGGCAGG‑T‑TTTTTTTTGCCTGACGTgt > 2:465643/1‑142 (MQ=255) tCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑T‑TTTTTTTTGCCTGTCGTGa > 1:749534/1‑143 (MQ=255) tCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGACACCGCGCCAACCGCGCACCGAAAGACGATTAGTTTCGTGTTTTAGTCATCAAAAACCTGCCGGCGATGGCAGG‑G‑TTGTTGTTGCCTGTCGCGa > 2:1158790/1‑143 (MQ=255) cGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑T‑TTTTTTTTGCCTGTCGTGAgc > 1:245801/1‑143 (MQ=255) cGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTCCCAGCGCTGGCAGG‑T‑TTTTTTTTGCCTGTCGTGAgc > 2:1174318/1‑143 (MQ=255) cGACCTCTATCCGTATTCGTAAACGCCACCTGACGGAACACGATCGTCGCCGCGCCAACCGCGCACCGGAAGGCGAGTAATTTCGCGCCTTAGACATAAACCACCTCCCCGCGCTGGCCGG‑T‑GTTCTTTCGCCTGTCgcgcgc > 2:442623/1‑138 (MQ=255) gACCTCTATCCGTCTTCGTAAACGTCACCTGACGGAACACGATCGTCGCCGCGCCAACCGCGCACCGCGAGGCGATTGCTTTCGTTTTTTCGTCATAAAAAACCTGCCAGCGATGGCAGG‑T‑TTTTTTTTGCCTGTCGTGAgcg < 2:1114036/143‑1 (MQ=255) gACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑T‑TTTTTTTTGCCTGTCGTGAgcg < 2:68318/143‑1 (MQ=255) gACCTCCATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCTAAAGACGAGTAATTTCGTGTTTTAGTCATAAAAAGCCTGCCAGCGATGGCAGG‑T‑TTTTTTTTGCCTGTCGTGAgcg < 1:216293/143‑1 (MQ=255) ccTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑T‑TTTTTTTTGCCTGTCGTGAGCGca < 1:485683/143‑1 (MQ=255) ccTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑T‑TTTTTTTTGCCTGTCGTGAGCGca < 1:766972/143‑1 (MQ=255) ctctATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑T‑TTTTTTTTGCCTGTCATGAGCGcac < 2:811522/143‑1 (MQ=255) tctATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCAACGAAAGACGATCAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGGCGGCAGG‑T‑CTTGTATTGCATGTCGTGAGCGcaca > 2:742427/1‑143 (MQ=255) tATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑C‑TTTTTTTTTTCTTTTGTTAACGCACAcc > 2:11056/1‑143 (MQ=255) aTCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGCTTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TCTTTTTTTTGCCTGTCGTGAgcgcccccc > 1:1117063/1‑138 (MQ=255) tCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCCCCGAAAGACGAGTAATGTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑T‑TGTTGTTTGCCTGTCGGGAGCGCACACCaa > 2:360462/1‑143 (MQ=255) tCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGTT‑TTTTTTTTGCCTGTCGTGAGCGCACCCCa > 1:1248442/1‑143 (MQ=255) gggaTTCGTAACCGTCACCTGACGGAAAACGATCGGCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTGTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑T‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATg < 2:275701/140‑1 (MQ=255) gTATTCGTAAACGTCACCTGACTGAAAACGCTCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑T‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGc < 2:362459/143‑1 (MQ=255) gTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTACTTTCGGTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑C‑TTTTTTTTGACTACAGTGAGCCCACACCAATGc > 2:491753/1‑143 (MQ=255) ttCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGCTTAATCTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑T‑TTTTTTTTGCCCGTCGTGAGCGCACACCAATGCGAg > 2:238404/1‑143 (MQ=255) ttCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑T‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAg > 1:834743/1‑143 (MQ=255) gTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑T‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTAt > 1:740138/1‑143 (MQ=255) gTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑T‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATACGAGTAt > 1:608026/1‑143 (MQ=255) aCGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑T‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTcc < 1:384598/143‑1 (MQ=255) aCCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑T‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTtat < 1:1128871/143‑1 (MQ=255) ccTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑T‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTtata > 1:1244183/1‑143 (MQ=255) cTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑T‑TTTTTTTTGCCTGTCGTGCGCGCACACCAATGCGAGTATCTCCCTTATaa < 1:61343/143‑1 (MQ=255) cTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑T‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTGCCTTATaa > 1:911738/1‑143 (MQ=255) gACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑T‑TTTTTTTTGCCTGTCATGAGCGCACACCAATGCGAGTATCTCCCTTATAAGt > 1:1205882/1‑143 (MQ=255) gACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTGCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑T‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGt < 2:688951/143‑1 (MQ=255) gACGGAAAACGATCGTCGCCGCGCCAACCGAGCACCGAAAGAAGATGAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑T‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGt > 1:660410/1‑143 (MQ=255) caCGGAAAACGAGCGTCGCCGGGACACCCGCGCACGGAAAGACGATTAATTTCGTTTTTTAGTCATAAAACACCTGCCAGCGATGGCAGG‑T‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGt < 1:266396/142‑1 (MQ=255) ggAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑T‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCtg < 1:695859/143‑1 (MQ=255) ggAAAACGATCGTCGCCGCGCCAAACGCGCACCGAAAGACGATTAATTACGATTTTTAGTCATAAAAAACATGCCAGCGATGGCAGG‑T‑TTTTTTTTGCCTGTCATGAGCGCACACCAATGCGAGTATCTCATTTATAAGTCtg > 2:1070547/1‑143 (MQ=255) gataaCGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑T‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCtgt < 2:1134995/140‑1 (MQ=255) gAAAACGATCGGCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑T‑TTTTTGTTGTCTGTCGTGAGCGCACACGAATGCGAGTATCTCCCTTATAAGTCtgt < 2:777502/143‑1 (MQ=255) aaaCGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑T‑TTTTTTTTGCCTGTCCTGAGCGCACACCAATCCGCGTAGCTCCCTTATAAGTCtgtcg > 1:1078785/1‑141 (MQ=255) aaaCGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTCTTTTAGTCATAAAAAACCTGCCAGCGACGGCAGG‑T‑TTTTTTTTGCCTGTCGTGAGCGCACACCACTGCGAGTATCTCCCTTATAAGTCTGTgg < 1:702084/143‑1 (MQ=255) aaCGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTCATTTCGTTTTTTACTCATCAAAAACCTGCCAGCGATGGCAGG‑T‑TTTTTTTTGCCTGTCGTCAGCGCACACCAATGCGAGGAGCTCCCTTATCAGTCTGTGGt > 2:625198/1‑143 (MQ=255) aCGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCGGACAGCGATGGCAGGCT‑TTTTGTTTGCCTGGCGTGAGCGCACACCAATGCGAGTATCTCCCTGATAAGGCTGTggg < 1:273534/143‑2 (MQ=255) gATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑T‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCACTTATAAGAATGTGGTAAc > 1:319840/1‑143 (MQ=255) tcgtcgCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑T‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGt > 1:511445/1‑143 (MQ=255) tcgtcgCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑T‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTCATACGTCTGCGGTTACGt > 1:497661/1‑143 (MQ=255) gtcgCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTGTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑T‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATACGTCTGTGATTACGTcc > 1:1169648/1‑142 (MQ=255) gtcgCCGCGCCAACCGAGCACTGAAAGAAGATTAATTTCGTTTTTTAGTCATACACCACCTGCCAGCGATGGCAGG‑T‑TTTTTTTTGCCTGTCGTTAGCGCAAAACAATGACAGGATTTCGCTTCTTAGTCGTTGGTTGCGtga > 2:943560/1‑141 (MQ=255) gccgcGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTGTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑T‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATa < 1:902765/143‑1 (MQ=255) gccgcGCCAACCGCGCACCGAAAGACGATTAATGTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑T‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATa < 2:658634/143‑1 (MQ=255) ccgcGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑T‑GTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATag > 1:803987/1‑143 (MQ=255) ccgcGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑‑‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATaga > 1:441489/1‑143 (MQ=255) aCCGCGCACCGATAGACGATTAATTCCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑T‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCttt < 2:185835/143‑1 (MQ=255) gccgcACGGAAAGCCGCTTCACTTCTGTGTTTAGTCATAAAGAACCTGCCGGCGATGGCAGG‑T‑TTTTTTTTGCCTGTCGTGAGCGCAGACCAATGCTAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGt < 2:200741/141‑1 (MQ=255) cgcgCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑T‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGt < 2:94330/143‑1 (MQ=255) gcgcACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑T‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTc > 2:1084307/1‑143 (MQ=255) gcgcAACGAAAGACGATTAATTTCGATTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑T‑TTTTTTTTGCCTGTCGTGAGCGCACACCAAGGCGAGTATCTGCCTTATAAGGGTGGGGTTACGTCAAAAGAAAGCATTgac > 2:413028/1‑141 (MQ=255) aaaGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑T‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTAt < 1:643098/143‑1 (MQ=255) aGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑T‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCt < 2:164255/143‑1 (MQ=255) gATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑T‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCGTTGTCACAATTATCTGCaa > 1:897779/1‑143 (MQ=255) ttAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑T‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAg < 2:1180776/143‑1 (MQ=255) tAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑T‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGGCTGTGGTTACGTCAATAGAGAGCTTAGTTACAATTATCTGCCAAGt > 2:26775/1‑143 (MQ=255) aTTTCGTTTTTTAGTCATAAAAAGCCTGCCAGCGATGGCAGG‑T‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCa < 2:219273/143‑1 (MQ=255) tttCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑T‑TTTTTTTTGCCTGACGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTAc < 1:247588/104‑1 (MQ=255) tttCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑T‑TTTTTTTTGCCTGACGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTAc > 2:247588/1‑104 (MQ=255) tttttttAGTCATTATAAACCTGCCAGCGATGGCAGG‑T‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGc < 1:1077401/142‑1 (MQ=255) ttttttAGTCATAAAAAACCTGCCGGCGATGGCAGG‑T‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGcc < 1:957149/143‑1 (MQ=255) ttAGTCGTACAAAACCTGCCAGCGATGGCCGG‑T‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTa < 2:410017/143‑1 (MQ=255) gttagaaagaaCCAGGCACCGCTGTCAGG‑T‑TTTTTTTTGCCCGTCGTGAGCGGACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAAtt < 2:200177/138‑1 (MQ=255) gTCATAACAAACCTGCCAGCGATGGCAGG‑T‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAAtt < 1:704321/143‑1 (MQ=255) tCATAAAAAACCTGCCAGCGATGGCAGG‑T‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTg < 1:1160940/143‑1 (MQ=255) aaaaaaaaaCCTGCCATCGCTGGCAGG‑T‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTAAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGc > 1:536782/4‑143 (MQ=255) aTAAAAAACCTGCCAGCGATGGCAGG‑T‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGct > 2:678329/1‑143 (MQ=255) aaaCCTGCCATCGCTGGCAGG‑T‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCACACGGCGTTCATTGctttctt > 1:469631/1‑143 (MQ=255) aaaCCTGCCATCGCTGGCAGG‑T‑TTTTTTTTGCCTGTCGTGAGCGCACACAAATGCGCGTATCACCCTTATAAGTGTGTGGTTACGTCAATAGAGAGCCTTGTGCCAATTATCTGCAAAGGCATACGCCGTGCATTggtcgctt > 2:473692/1‑136 (MQ=255) gtGCCAGCGAGGGCAGG‑T‑GTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCtttttt < 1:166680/142‑1 (MQ=255) cTGCCAGCGATGGCAGG‑T‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCtttttt < 1:582389/143‑1 (MQ=255) cTGCCAGCGATGGCAGG‑T‑TTTTTTTGGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGGCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCtttttt < 1:990812/143‑1 (MQ=255) tGCCAGCGATGGCAGG‑T‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTTTTTg < 2:906147/143‑1 (MQ=255) ccAGCTATGGCAGG‑T‑TTTTTTTTGCCTGTTGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTTTTTGgc < 2:657761/143‑1 (MQ=255) aGCGATGGCAGG‑T‑TTTTTTTTTTCTTTTTTTATCTCACATCATTGCGATTATTTTTCTTTTTATTTTTTTGTTTCTTCTATTGTTTGCTTTGTCACTATTATCTGCTATTTCATTCGCCTTTAATTGTTTTCTTTTTTTgcgt > 2:285705/1‑143 (MQ=255) aGCGATGGCAGG‑T‑TTTTTTTTTCTTTTCGTCAGCGCACACCAATGCGAGTATCTCCCTTTTAAGTTTGTGGTTACGTCACTACTGAGCTTTGTCCCAATTATATGCAACCTCATACGCTGGTAATTGCTGTCTGTTTTggtgc > 2:936197/1‑140 (MQ=255) aGCGATGGCAGG‑T‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTTTTTGgcgt < 1:622871/143‑1 (MQ=255) | CGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑T‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTTTTTGGCGT > NC_000913/4060122‑4060402 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |