| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,159,186 | G→A | 38.6% | A233T (GCA→ACA) | oxyR → | DNA‑binding transcriptional dual regulator OxyR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,159,186 | 0 | G | A | 38.6% | 83.8 / 114.7 | 130 | A233T (GCA→ACA) | oxyR | DNA‑binding transcriptional dual regulator OxyR |
| Reads supporting (aligned to +/- strand): ref base G (39/40); new base A (22/27); total (61/69) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.16e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.70e-01 | |||||||||||
Only 100 of 135 total aligned reads displayed.
TGGCAGGGGAAAAACTGCTGATGCTGGAAGATGGTCACTGTTTGCGCGATCAGGCAATGGGTTTCTGTTTTGAAGCCGGGGCGGATGAAGATACACACTTCCGCGCGACCAGCCTGGAAACTCTGCGCAACATGGTGGCGGCAGGTAGCGGGATCACTTTACTGCCAGCGCTGGCTGTGCCGCCGGAGCGCAAACGCGATGGGGTTGTTTATCTGCCGTGCATTAAGCCGGAACCACGCCGCACTATTGGCCTGGTTTATCGTCCTGGCTCACCGCTGCGCAG > NC_000913/4159046‑4159328 | tGGCAGGGGAAAAACTGCTGATGCTGGAAGATGGTCACTGTTTGCGCGATCAGGCAATGGGTTTCTGTTTTGAAGCCGGGGCGGATGAAGATACACACTTCCGCGCGACCAGCCTGGAAACTCTGCGCAACATGGTGGCGGCa > 1:372714/1‑143 (MQ=255)tGGCAGGGGAAAAACTGCTGATGCTGGAAGATGGTCACTGTTTGCGCGATCAGGCAATGGGTTTCTGTTTTGAAGCCGGGGCGGATGAAGATACACACTTCCGCGCGACCAGCCTGGAAACTCTGCGCAACATGGTGGCGACa < 1:1072997/143‑1 (MQ=255)aaacAGGGGAAAAACTGCTGATGCTGGAAGATGGTCACTGAATGCGCGATCAGGCAATGGGGTTCTGTTTTGAAGCCGGGGCGGATGAAGATACACACTTCCGCGCGACCAGCCTGGAAACTCTGCGCAACATGGTGGCGACa < 1:1258538/140‑1 (MQ=255) gCAGGGGAAAAACTGCTGATGCTGGAAGATGGTCACTGTTTGCGCGATCAGGCAATGGGTTTCTGTTTTGAAGCCGGGGCGGATGAAGATACACACTTCCGCGCGACCAGCCTGGACACTCTGCGCAACATGGTGGCGGCAgg > 2:1193173/1‑143 (MQ=255) gCAGGGGAAAAACTGCTGATGCTGGAAGATGGTCACTGTTTGCGCGATCAGGCAATGGGTTTCTGTTTTGAAGCCGGGGCGGATGAAGATACACACTTCCGCGCGACCAGCCTGGAAACTCTGCTCAACGTGTTGGCGGCAgg > 1:35739/1‑143 (MQ=255) aGGGGAAGAACTGCTGATGCTGGAAGATTGTCACTGTTTGCGCGATCAGGCAATGGGTTTCTGTTTTGAAGCCGGGGCGGATGAAGATACACACTTCCGCGCGACCAGCCTGGAAACTCTGCGCAACATGGTGGCGACAGGTa < 2:54230/143‑1 (MQ=255) aGGGGAAAAACTGCTGATGCTGGAAGATGGTCACTGTTTGCGCGATCAGGGGATGGGTGGCGGTTTTGTGGCACCCCCCCAGCAAGAGACACACTTCCGCGCGACCAGCCTGGAAACTCTGCGCAACATGGTGGCGACAGGtc > 1:938386/1‑142 (MQ=255) ggggAACACTGCTGATGATGGAAGCTGGTCCGTTTTTGCGCGATCAGGCAATGGGTTTCTGTTTTGAAGCCGGGGCGGATGAAGATACACACTTCCGCGCGACCAGCCTGGAAACTCTGCGCAACATGGTGGCGGCAGGTAGc < 2:560558/143‑1 (MQ=255) gcgaagaCTGCTGAGGCTGGAAGATGGTCACTGTTTGCGCGATCAGGCAATGGGTTTCTGTTTTGAAGCCGGGGCGGATGAAGATACACACCTCCGCGCGACCAGCCTGGAAACTCTGCGCAACATGGTGGCGGCAGGTAGCg < 2:969890/137‑1 (MQ=255) gAAAAACTGCTGATGCTGGAAGATGGTCACTGTTTGCGCGATCAGGCAATGGGTTTCTGTTTTGAAGCCGGGGCGGATGAAGATACACACTTCCGCGCGACCAGCCTGGAAACTCTGCGCAACATGGTGGCGGCAGGTAGCgg > 1:690802/1‑143 (MQ=255) aCTGCTGATGCTGGAAGATGGTCACTGTTTGCGCGATCAGGCAATGGGTTTCTGTTTTGAAGCCGGGGCGGATGACGATACACACTTCCGCGCGACCAGCCTGGAACCTCTGCGCCACATGGTGGCGGCAGGTAGAGGGATCa > 1:556952/1‑143 (MQ=255) aCTGCTGATGCTGGAAGATGGTCACTGTTTGCGCGATCAGGCAATGGGTTTCTGTTTTGAAGCCGGGGCGGATGAAGATACACACTTCCGCGCGACCAGCCTGGAAACTCTGCGCAACATGGTGGCGGCAGGTAGCGGGATCa > 1:115395/1‑143 (MQ=255) aCTGCTGATGCCGGAAGAGCGTCACTGTTTGCGCGATCGGGCAATGCGTTTCTGTTTTGAAGCCGGGGCGGATGAAGATACACACTTCCGCGCGACCAGCCTGGAAACTCTGCGCAACATGGTGGCGACAGGTAGCGGGATCa < 2:860055/143‑1 (MQ=255) gctgATGCGGGGAGATGGTCACTGTTTGCGCGCTCCGGCAATGGGTTTCGGTGTTGAAGCCGGGGCGGATGCAGATACACGCTTCCGCGCGACCAGCCTGGAAACTCTGCGCAACATGGTGGCGGCAGGTAGCGGGATCACtt < 2:750448/143‑1 (MQ=255) cggttcTGGAAGATGGTCACTGTTTGCGCGAGCCGGCAATGGGTTTCTGTTTTGAAGCCGGGGCGGATGAAGATACACACTGCCGCGCGACCAGCCTGGAAACTCTGCGCAACATGGTGGCGGCAGGTAGCGGGATCACTTTa < 2:464164/138‑1 (MQ=255) aTGCTGGAAGATGGTCACTGTTTGCGCGATCAGGCAATGGGTTTCTGTTTTGAAGCCGGGGCGGATGAAGATACACACTTCCGCGCGACCAGCCTGGAAACTCTGCGCAACATGGTGGCGGCAGGTAGCGGGATCACTTTACt < 1:1123060/143‑1 (MQ=255) aTGCTGGAAGATGGTCACTGTTTGCGCGATCAGACACTGGGGTTTGGTTGTGAAGCCGGGGCGGATGAATATACACACTTCCGCGCGACCAGCCTGGAAACTCTGCGCAACATGGTGGCGACAGGTAGCGGGATCACTTTACt < 2:77477/143‑1 (MQ=255) gCTGGAAGATGGTCACTGTTTGCGCGATCAGGCAATGGGTTTCTGTTTTGAAGCCGGGGCGGATGAAGATACACACTTCCGCGCGACCAGCCTGGAAACTCTGCGCAACATGGTGGCGGCAGGTAGCGGGATCACTTTACTGc > 2:92126/1‑143 (MQ=255) gCTGGAAGATGGTCACTGTTTGCGCGATCAGGCAATGGGTTTCTGTTTTGAAGCCGGGGCGGATGAAGATACACACTTCCGCGCGACCAGCCTGGAAACTCTGCGCAACATGGTGGCGACAGGTAGCGGGATCACTTTACTGc < 1:819188/143‑1 (MQ=255) tGGAAGATGGTCACTGTTTGCGCGATCAGGCAATGGGTTTCTGTTTTGAAGCCGGGGCGGATGAAGATACACACTTCCGCGCGGCCAGCCTGGAAACTCTGCGCAACATGGTGGCGACAGGTAGCGGGATCACTTTACTGCCa > 1:1271667/1‑143 (MQ=255) tGGAAGATGGTCACTGTTTGCGCGATCAGGCAATGGGTTTCTGTTTTGAAGCCGGGGCGGATGAAGATACACACTTCCGCGCGACCAGCCTGGAAACTCTGCGCAACATGGTGGCGACAGGTAGCGGGCTCACTTGAcgggca > 1:579611/1‑138 (MQ=255) ggAAGATGGTCACTGTTTGCGCGATCAGGCAATGGGTTTCTGTTTTGAAGCCGGGGCGGATGAAGATACACACTTCCGCGCGACCAGCCTGGAAACTCTGCGCAACATGGTGGCGGCAGGTCGCGGGATCACTTTACTGCCAg > 2:620749/1‑143 (MQ=255) ggAAGATGGTCACTGTTTGCGCGATCAGGCAATGGGTTTCTGTTTTGAAGCCGGGGCGGATGAAGATACACACTTCCGCGCGACCAGCCTGGAAACTCTGCGCAACATGCTGGCGGCAGGTAGCGGGATCACTTTACTGCCAg > 2:964636/1‑143 (MQ=255) ggAAGATGGTCACTGTTTGCGCGATCAGGCAATGGGCTTCTGTTTTGAAGCCGGGGCGGATGAAGCTACACACTTCCGCGCGACCAGCCTGGAAACTCTGCGCACCATGGTGGCGGCAGGTCGCGGGATCACTTCACTGCAAg > 2:327818/1‑143 (MQ=255) aGATGGTCACTGTTTGCGCGATCAGACAATGGAATTAACGCGTTTGGCCGGGGCGGATGAAGATACACACTTCCGCGCGACCAGCCTGGAAACTCTGCGCAACATGGTGGCGACAGGTAGCGGGATCACTTTACTGCCAgcgc < 1:533345/143‑1 (MQ=255) ggTCACTGTTTGCGCGATCAGGCAATGGGTTTCTGTTTTGAAGCCGGGGCGGCTGAAGATACACCCTTCCGCGCGACCAGCCTGGAAACTCTGCGCAACATCGTGACGGCAGGTAGCGGGATCACTTTACTGCCAGCgctggc > 1:623818/1‑143 (MQ=255) cACTGTTTGCGCGATCAGGCAATGGGTTTCTGTTTTGAAGCCGGGGCGGATGAAGATACACACTTCCGCGCGACCAGCCTGGAAACTCTGCGCAACATGGTGGCGGCAGGTAGCGGGATCACTTTACTGCCAGCGCTGGCtgt < 2:1019912/143‑1 (MQ=255) gTTTGCTCGATCAGGCAATGGGTTTCTGTTTTGAAGCCGGGGCGGATGAAGATACACACTTCCGCGCGACCAGCCTGGAAACTCTGCGCAACATGGTGGCGACAGGTAGCGGGATCACTTTACTGCCAGCGCTGGCTGTgccg < 1:346945/143‑1 (MQ=255) tGCGCGATCAGGCAATGGGTTTCTGTTTTGAAGCCGGGGCGGATGAAGATACACACTTCCGCGCGACCAGCCTGGAAACTCTGCGCAACATGGTGGCGGCAGGTAGCGGGATCACTTTACTGCCAGCGCTGGCTGTGccgccg < 2:328846/143‑1 (MQ=255) cgcgATCAGGCAATGGGTTTCTGTTTTGAAGCCGGGGCGGATGAAGATACACACTTCCGCGCGACCAGCCTGGAAACTCTGCGCAACATGGTGGCGACAGGTAGCGGGATCACTTTAGTGCCAGCGCTGGATGTGCAGCCGGa > 2:1033492/1‑143 (MQ=255) gcgATCAGGCAATGGGTTTCTGTTTGGAAGCCGGGGCGGATGAAGATACACACTTCCGCGCGACCAGCCTGGAAACGCTGCGCAACATGGTGGCGACAGGTAGCGGGATCACTTTACTGCCAGCGCTGGCTGTGCCGCCGGAg < 1:49969/143‑1 (MQ=255) cgATCAGGCAATGGGTTTCTGTTTTGAAGCCGGGGCGGATGAAGATACACACTTCCGCGCGACCAGCCTGGAAACTCTGCGCAACATGGTGGCGGCAGGTAGCGGGATCACTTTACTGCCAGCGCTGGCTGTGCCGCCGGAgc < 1:1018145/143‑1 (MQ=255) gATCAGGCAATGGGTTTCTGTTTTGAAGCCGGGGCGGATGAAGATACACACTTCCGCGCGACCAGCCTGGAAACTCTGCGCAACATGGTGGCGGCAGGTAGCGGGATCACTTTACAGCCAGCGCTGGGTGTGCCGCCGGcgcg > 2:429024/1‑143 (MQ=255) cAATGGGTTGCTGGTTTGAGGCCGGGGCGGATGAAGATACACACTTCCGCGCGACCATCCTGGAAACTCTGCGCAACATGGTGGCGGCAGGTAGCGGGATCACTTTACTGCCAGCGCTGGCTGTGCCGCCGGAGCGCAAAcgc < 2:138117/143‑1 (MQ=255) aTGGGTTTCTGTTTTGAAGCCGGGGCGGCTGAAGATACACACTTCCGCGCGACCAGCCTGGGAACTCAGCCGCACGTGGCGGCGACAGGTCGCTGGATCACTTTACTGCCACCGCTGGCTCTGCCGGCGGGCCGCCAACGCGa > 2:694052/1‑143 (MQ=255) tttCTGTTTTGAAGCCGGGGCGGATGAAGATACACACTTCCGCGCGACCAGCCTGGAAACTCTGCGCAACATGGTGGCGACAGGTAGCGGGATCACTTTACTGCCAGCGCTGGCTGTGCCGCCGGCGCGCAAACGCGCTgggg > 2:77381/1‑143 (MQ=255) tttCTGTTTTGAAGCCGGGGCGGATGAAGATACACACTTCCGCGCGACCAGCCTGGAAACTCTGCGCAACATGGTGGCGACAGGTAGCGGGATCACTTTACTGCCAGCGCTGGCTGTGCCGCCGGAGCGCCAACGCGCTgggg > 2:350912/1‑143 (MQ=255) tgtCTGTTTTGAAGCCGGGGCGGAGGGCGATACACACTTCCGCGCGACCAGCCTGGAAACTCTGCGCAACATGGTGGCGGCAGGTAGCGGGATCACTTTACTGCCAGCGCTGGCTGTGCCGCCGGAGCGCAAACGCGATgggg < 2:1031539/141‑1 (MQ=255) tCTGTTCTGAAGCCGGGGCGGATGAAGATACACACTTCCGCGCGACCAGCCTGGAAACTCTGCGCAACATGGTGGCGGCAGGTAGCGGGATCACTTTACTGCCAGCGCTGGCTGTGCCGCCGGAGCGCAAACGCGATGGGgtt < 1:855580/143‑1 (MQ=255) ctactttGAAGACGGGGCGGATGAAGAGACACACGTCCGCGCGACCAGCCTGGAAACTCTGCGCAACATGGTGGCGACAGGTAGCGGGATCACTTTACTGCCAGCGCTGGCTGTGCCGCCGGAGCGCAAACGCGATGGGgttg < 1:1128133/139‑1 (MQ=255) cTGTTTTGAAGCCGGGGCGGATGAAGATACACACTTCCGCGCGACCAGCCTGGAAACTCTGCGCAACATGGTGGCGGCAGGTAGCGGGATCACTTTACTGCCAGCGCTGGCTGTGCAGCCGGAGCGGAAAAGCGATGGGgttg > 1:678973/1‑143 (MQ=255) tGTTCTGCAGCCGGGGCGGATGAGGATACACACCTCCGCGCGACCAGCCTGGAAACTCTGCGCAACATGGTGGCGGCAGGTAGCGGGATCACTTTACTGCCAGCGCTGGCTGTGCCGCCGGAGCGCAAACGCGATGGGgttgt < 2:977291/143‑1 (MQ=255) gggtgtGAAGCCGGGGCGGATGAAGATACACACGTCCGCGCGACCAGCCTGGAAACTCTGCGCAACATGGTGGCGGCAGGTAGCGGGATCACTTTACTGCCAGCGCTGGCTGTGCCGCCGGAGCGCAAACGCGATGGGgttgt < 2:37045/138‑1 (MQ=255) gTTTTGAAGCCGGGGCGGATGAAGATACACACTTCCGCGCGACCAGCCTGGAAACTCTGCGCAACATGGTGGCGGCAGGTAGCGGGATCACTTTACTGCCAGCGCTGGCTGTGCCGCCGGAGCGCAAACGCGATGGGgttgtt > 2:141989/1‑143 (MQ=255) atgtgtaGCCTGGGTGGACGTAGATACACGCTTCCGCGTGACCAGCCTGTAAATTCTGCGCAATATGGTGGCGACAGGTAGCGGGATCACTTTATTGCCAGCGCTGGCTGTGTCGCCGGAGCGCAAACGCGATGGTGTTGttt < 2:74635/137‑1 (MQ=255) ttGAAGCCGGGGCGGATGAAGATACACACTTCCGCGCGACCAGCCTGGAAACTCTGCGCAACATGGTGGCGGCAGGTAGCGGGATCACTTTACTGCCAGCGCTGGCTGTGCCGCCGGAGCGCAAACGCGATGGGGTTGTTTAt < 1:499290/143‑1 (MQ=255) aGCCGGGGCGGATGAAGATACACACTTCCGCGCGACCAGCCTGGAAACTCTGCGCAACATGGTGGCGGCAGGTAGCGGGATCACTTTACTGCCAGCGCTGGCTGTGCCGCCGGAGCGCAAACGCGATGGGGTTGTTTATCTGc < 1:1017173/143‑1 (MQ=255) ccGGGGCGGATGAAGATACACACTTCCGCGCGACCAGCCTGGAAACTCTGCGCAACATGGTGGCGGCCGGTAGCGGGATCACTTTACTGCCAGCGCTGGCTGTGCCGCCGGAGCGCAAACGCGATGGGGGTGCTCATCTGCCg > 1:971853/1‑143 (MQ=255) gggggCGGATGCAGAGACACACTTCCGCGCGACCAGCCTGGAAACTCTGCGCAACATGGTGGCGACAGGTCGCGGGATAACTTTACCGCCAGCGCTGGCTGTGCCGCCGGAGCGCAAACGCGATGGGGTTGTTTCTCTGCCGt < 1:810013/142‑1 (MQ=255) cGGGGCGGAGGAAGATACACACTTCCGCGCGACCAGCCTGGAAACTCTGCGCAACATGGTGGCGACAGGTAGCGGGATCACTTTACTGCCAGCGCTGGCTGTGCCGCCGGAGCGCAAACGCGATGGGGTTGTTTATCTGCCGt < 1:908507/143‑1 (MQ=255) ggCGGATGAAGATACACACTTCCGCGCGACCAGCCTGGAAACTCTGCGCAACATGGTGGCGACAGGTAGCGGGATCACTTTACTGCCAGCGCTGGCTGTGCCGCCGGAGCGCAAACGCGATGGGGTTGTTTATCTGCCGTGCa < 1:225529/143‑1 (MQ=255) gCGGATGAAGATACACACTTCCGCGCGACCAGCCTGGAAACTCTGCGCAACATGGTGGCGGCAGGTAGCGGGTTAACTTTACTGCCAGCGCTGGCTGTGCTGCCGGAGCGCAGACGCGATGGGGTTGTTTATCTGCCGTGCAt > 1:216564/1‑143 (MQ=255) gCGGATGAAGATACACACTTCCGCGCGACCAGCCTGGAAACTCTGCGCAACATGGTGGCGGCAGGTAGCGGGATCACTTTACTGCCAGCGCTGGCTGTGCCGCCGGAGCGCACACGCGGCGGGGTTGTTTGTCGGCCGGGCAt > 1:215465/1‑143 (MQ=255) gCGGATGAAGATACACACTTCCGCGCGACCAGCCTGGAAACTCTGCGCAACATGGTGGCGACAGGTAGCGGGATCACTTTACTGCCAGCGCTGGCTGTGCCGCCGGAGCGCAAACGCGATGGGGTTGTTTATCTGCCGTGCAt > 1:900536/1‑143 (MQ=255) cGGGTGAAGAGACAGACTGCCGCGCGACCAGCCTGGAAACTCTGCGCAACATGGTGGCGGCAGGTAGCGGGATCACTTTACTGCCAGCGCTGGCTGTGCCGCCGGAGCGCAAACGCGATGGGGTTGTTTATCTGCCGTGCAtt < 1:1256811/143‑1 (MQ=255) cGGAGGAAGATACACACTTCCGCGCGACCAGCCTGGAAACTCTGCGCAACATGGTGGCGGCAGGTAGCGGGATCACTTTACTGCCAGCGCTGGCTGGGCCGCCGGAGCGCAAACGCGATGGGGTTGTTTATCTGCCGTGCAtt < 2:1156993/143‑1 (MQ=255) gATGAAGATACACACTTCCGCGCGACCAGCCTGGAAACTCTGCGCAACATGGTGGCGACAGGTAGCGGGATCACTTTACTGCCAGCGCTGGCTGTGCCGCCGGAGCGCACACGCGATGGGGCTGTTTATCTGCCGTGCCTTaa > 2:284650/1‑143 (MQ=255) gAAGAGACACACTTCCGCGCGACCAGCCTGGAAACTCTGCGCAACATGGTGGCGGCAGGTAGCGGGATCACTTTACTGCCAGCGCTGGCTGTGCCGCCGGAGCGCAAACGCGATGGGGTTGTTTATCTGCCGTGCATTAAGcc < 1:320392/143‑1 (MQ=255) aGATACACACTTCCGCGCGACCAGCCTGGAAACTCTGCGCAACATGGTGGCGGCAGGTAGCGGGATCACTTTACTGCCAGCGCTGGCTGTGCCGCCGGAGCGCAAACGCGATGGGGTTGTTTCTCCGCCGTGCATTAAGCCgg > 2:938329/1‑143 (MQ=255) aGATACACACTTCCGCGCGACCAGCCTGGAAACTCTGCGCAACATGGTGGCGACAGGTAGCGGGATCACTTTACTGCCAGCGCTGGCTGTGCCGCCGGAGCGCAAACGCGATGGGGTTGTTTATCTGCCGTGCATTAAGCCgg > 2:1192392/1‑143 (MQ=255) aGATACACACTTCCGCGCGACCAGCCTGGAAACTCTGCGCAACAGGGTGGCGGCAGGTAGCGGGATCACTTTACTGCCAGCGCTGGCTGTGCCGCCGGAGCGCAAACGCGATGGGGTTGTTTATCTGCCGTGCATTAAGCCgg < 2:579350/143‑1 (MQ=255) acacacTTCCGCGCGACCAGCCTGGAAACTCTGCGCAACATGGTGGCGGCAGGTAGCGGGATCACTTTACTGCCAGCGCTGGCTGTGCCGCCGGAGCGCAAACGCGATGGGGTTGTTTATCTGCCGTGCATTCAGGCGGAAcc > 1:528218/1‑143 (MQ=255) acacacTTCCGCGCGACCAGCCTGGAAACTCTGCGCAACATGGTGGCGGCAGGTAGCGGGATCACTTTACTGCCAGCGCTGGCTGTGCCGCCGGAGCGCAAACGCGATGGGGGAGGTTATCTGGCGGGCATTGAGCCGGaagc > 2:698682/1‑141 (MQ=255) cacacTTCCGCTCGACCAGCTTGGAGACTCTGCGCAACATGGTGGCGACAGGTAGCGGGATCACTTGACGGCCAGCGCTGGCTGTGCCGCCGGAGCGCAAACGCGATGGGGTTGTTTATCTGCCGTGCATTAAGCCGGAACCa < 2:316484/143‑1 (MQ=255) tcTTCCGGGCGACCAGCCTGGAGACTCTGCGCAACATGGTGGCGACAGGTAGCGGGATCACTTTACTGCCAGCGCTGGCTGTGCCGCCGGAGCGCAAACGCGATGGGGTTGTTTATCTGCCGTGCATTAAGCCGGAACCAcgc < 2:1082791/142‑1 (MQ=255) acTTCCGCGCGACCAGCCTGGAAACTCTGCGCAACATGGTGGCGGCAGGTAGCGGGATCACTTTACTGCCAGCGCTGGCTGTGCCGCCGGAGCGCAAACGCGATGGGGTTGTTTATCTGCCGTGCATTAAGCCGGAACCAcgc > 2:565238/1‑143 (MQ=255) ttCCGCGCGACCAGCCTGGAAACTCTGCGCAACATGGTGGCGGCAGGTAGCGGGATCACTTTACTGCCAGCGCTGGCTGTGCCGCCGGAGCGCAAACGCGATGGGGTTGGTTATCTGCCGTGGACTAACCCGGCAACAcgccg > 2:818880/1‑143 (MQ=255) cgcgcgACCAGCCTGGAAACTCTGCGCAACATGGTGGCGGCAGGTAGCGGGATCACTTTACTGCCCGCGCTGGCTGTGCCGCCGGAGCGCAAACGCGATGGAGTTGTTTATCTGCCGTGCATTAAGCCGGAACGACGCCGCAc > 2:745449/1‑143 (MQ=255) gACCAGCCTGGAAACTCTGCGCAACATGGTGGCGGCAGGTAGCGGGATCACTTTACTGCCAGCGCTGGCTGTGCCGCCGGAGCGCAAACGCGATGGGGTTGTTTATCTGCCGTGCATTAAGCCGGAACCACGCCGCACTATTg > 2:471719/1‑143 (MQ=255) ccAGCCTGGAAACTCTGCGCAACATGGTGGCGGCAGGTAGCGGGATCACTTTACTGCCAGCGCTGGCTGGGCCGCCGGAGCGCAAACGCGATGGGGTTGTTTATCTGCCGTGCATTAAGCCGGAACCACGCCGCACTATTGGc < 2:1152414/143‑1 (MQ=255) gCCTGGACACTCTGCGCAACCTGGTGGCGGCAGGTAGCGGGATCACTTTACTGCCAGCGCTGGCTGTGCCGCCGGAGCGCAAACGCGATGGGGTTGTTTATCTGCCGTGCATTAAGCCGGAACCACGCCGCACTATTGGCCTg < 2:539093/143‑1 (MQ=255) gCCTGGAAACTCTGCGCAACATGGTGGCGGCAGGTAGCGGGATCACTTTACTGCCAGCGCTGGCTGTGCCGCCGGAGCGCCAACGCGACGGGCCTGTTTAGCTGCCGCGCATTAAGCCGGAACCACGCCGCACTACTCGccgg > 2:505081/1‑141 (MQ=255) ccTGGAAACTCTGCGCAACATGGTGGCGGCAGGTAGCGGGATCACTTTACTGCCAGCGCTGGCTGTGCCGCCGGAGCGCAAACGCGATGGGGTTGTTTATCTGCCGTGCATTACGCCGGAACCACGCCGCACTATTGGCCTgg > 1:499446/1‑143 (MQ=255) ccTGGAAACTCTGCGCAACATGGTGGCGGCAGGTAGCGGGATCACTTTACTGCCAGCGCTGGCTGTGCCGCCGGAGCGCAAACGCGATGGGGTTGTTTATCTGCCGTGCATCAAGCCGGAACCACGCCGCACTATTGGCCTgg > 2:198219/1‑143 (MQ=255) tGGAAACTCTGCGCAACATGGTGGCGGCAGGTAGCGGGATCACTTTACTGCCAGCGCTGGCTGTGCCGCCGGAGCGCAAACGCGATGGGGTTGTTTATCTGCCGTGCATTAAGCCGGAACCACGCCGCACTATTGGCCTGGtt < 2:450607/143‑1 (MQ=255) tGGAAACTCTGCGCAACATGGTGGCGACAGGTAGCGGGATCACTTTACTGCCAGCGCTGGCTGTGCCGCCGGAGCGCAAACGCGATGGGGTTGTTTATCTGCCGTGCATTAAGCCGGAACCACGGCGCACTATTGGCCTGGtt > 2:488746/1‑143 (MQ=255) ggAAACTCTGCGCAACATGGTGGCGACAGGTAGCGGGATCACTTTACTGCCAGCGCTGGCTGTGCCGCCGGAGCGCAAACGCGATGGGGTTGTTTATCTGCCGTGCATTAAGCCGGAACCACGCCGCACTATTGGCCTGGttt > 1:606692/1‑143 (MQ=255) gAAACTCTGCGCAACATGGTGGCGACAGGTAGCGGGATCACTTTACTGCCAGCGCTGGCTGTGCCGCCGGAGCGCAAACGCGATGGGGTTGTTTATCTGCCGTGCATTCAGCCGGGACCACGCCGCACTATCGGCCTGGtttg > 1:1028916/1‑142 (MQ=255) taaCGCTGCGCAACAGGGCGGCGCCAGGTAGCGGGATCACTTTACTGCCAGCGCTGGCTGTGCCGCCGGAGCGCAAACGCGATGGGGTTGTTTATCTGCCGTGCATTAAGCCGGAACCACGCCGCACTATTGGCCTGGTTTAt < 1:465800/142‑1 (MQ=255) acctccGCGCACCATGGTGCCGGCAGGTGGCGGGCTCACTCTACTGCCAGCGCTGGCTGTGCCGCCGGAGCGCAAACGCGATGGGGTTGTTTATCTGCCGTGCATTAAGCCGGAACCACGCCGCACTATTGGCCTGGTTTATc < 1:1322/141‑1 (MQ=255) accctGCGCAACATGGTGGCGCCAGGTGGCGGGATCACTTTACTGCCAGCGCTGGCTGTGCCGCCGGAGCGCAAACGCGATGGTGTTGTTTATCTGCCGTGCATTAAGCCGGAACCACGCCGCACTATTGGCCTGGTTTATCg < 2:85177/140‑1 (MQ=255) aCTCTGCGCAACATGGTGGCGGCAGGTAGCGGGATCACTTTACTGCCAGCGCTGGCTGTGCCGCCGCAGCGCAAACGCGATGGGGTTGTTTATCTGCCGTGCATTAAGCCGGAGCCCCGCCCCGCTCTTGGCCTGGTTGAtgc > 1:525122/1‑141 (MQ=255) aCTCTGCGCAACATGGTGGCGACAGGTAGCGGGATCACTTTACTGCCAGCGCTGGCTGTGCCGCCGGAGCGCAAACGCGATGGGGTTGTTTCTCTGCCGTGCATTAAGCCGGAACCACGCCGCCCTATTGGCCTGGTTTATCg > 1:1212978/1‑143 (MQ=255) tctGCCCAACATGGTGGCCGCAGGTAGCGGGATCACTTTACTGCCAGCGCTGGCTGTGCCGCCGGAGCGCAAACGCGATGGGGTTGTTTATCTGCCGTGCATTAAGCCGGAACCACGCCGCACTATTGGCCTGGTTTATCGTc < 1:153825/143‑1 (MQ=255) ctGCGCAACATGGTGGCGGCAGGTAGCGGGATCACTTTACTGCCAGCGCTGGCTGTGCCGCCGGAGCGCAAACGCGATGGGGTTGTTTATCTGCCGTGCATTAAGCCGGAACCACGCCGCACTCTTGGCCTGGTTTATccccc > 2:596577/1‑139 (MQ=255) ctGCGCAACATGGTGGCGGCAGGTAGCGGGATCACTTTACTGCCAGCGCTGGCTGTGCCGCCGGAGCGCAAACGCGATGGGGTTGTTTATCTGCCGTGCATTAAGCCGGAACCACGCCGCACTATTGGCCTGGTTTATCGTcc > 1:1176745/1‑143 (MQ=255) ctGCGCAACATGGTGGCGACAGGTAGCGGGATCACTTTACTGCCAGCGCTGGCTGTGCCGCCGGAGCGCAAACGCGATGGGGTTGTTTATCTGCCGTGCATTAAGCCGGAACCACGCCGCACTATTGGCCTGGTTTATCGTcc < 1:463491/143‑1 (MQ=255) tgggcgaCATGGTGGCGGCAGGGATCGGGATCACTTTACTGCCAGCGCTGGCTGTGCCGCCGGAGCGCAAACGCGATGGGGTTGTTTATCTGCCGTGCATTAAGCCGGAACCACGCCGCACTATTGGCCTGGTTTATCGTCCt < 2:19616/137‑1 (MQ=255) tGCGCAACATGGTGGCGGCAGGTAGCGGGATCACTTTACTGCCAGCGCTGGCTGTGCCGCCGGAGCGCAAACGCGATGGGGTTGTTTATCTGCCGTGCATTAAGCCGGAACCACGCCGCACTATTGGCCTGGTTTATCGTccc > 2:210459/1‑142 (MQ=255) cgcACCATGGTCGCGACAGGTAGGGGGATCACTGTACTGCCAGCGCTGGCTGTGCCGGCGGAGCGCAAACGCGATGGGGTTGTTTATCTGCCGTGCATTAAGACGGAACCACGCCGCACTATTGGCCTGGTTTATCGTCCTgg < 2:692446/143‑1 (MQ=255) cgcAACATGGTGGCGGCAGGTAGCGGGATCACTTTACTGCCAGCGCTGGCTGTGCCGCCGGAGCGCAAACGCGATGGGGTTGTTTATCTGCCGTGCATTAAGCCGGAACCACGCCGCACTATTGGCCTGGTTTATCGTCCTgg < 1:1170158/143‑1 (MQ=255) gcAACATGGTGGCGACAGGTAGCGGGATCACTTTACTGCCAGCGCTGGCTGTGCCGCCGGAGCGCAAACGCGATGGGGTTGTTTATCTGCCGTGCATTAAGCCGGACCCACGCCGCACTATTGGCCTGGTTTATCGTCCTGGc > 1:548982/1‑143 (MQ=255) gcAACAGGGTGGGGACAGGTAGCGGGATCACTTTACTGCCAGCGCTGGCTGTGCCGCCGGAGCGCAAACGCGATGGGGTTGTTTATCTGCCGTGCATTAAGCCGGAACCACGCCGCACTATTGGCCTGGTTTATCGTCCTGGc < 2:531653/143‑1 (MQ=255) cAACATGGTGGCGGCAGGTAGCGGGATCACTTTACTGCCAGCGCTGGCTGTGCCGCCGGAGCGCAAACGCGATGGGGTTGTTTATCTGCCGTGCATTAAGCCGGAACCACGCCGCACTATTGGCCTGGTTTATCGTCCTGGCt > 1:843466/1‑143 (MQ=255) cAACATGGTGGCGACAGGTAGCGGGATCACTTTACTGCCAGCGCTGGCTGTGCCGCCGGAGCGCAAACGCGATGGGGTTGTTTATCTGCCGTGCATTAAGCCGGAACCACGCCGCACTATTGGCCTGGTTTATCGTCCTGGCt < 1:425810/143‑1 (MQ=255) aaCATGGTGGCGACAGGTAGCGGGATCACTTTACTGCCAGCGCTGGCTGTGCCGACGGCGCGCACACGCGATGGGGTTGTTTATCTGCAGTGCATGAAGCCGGAATCACGCAGGACATGTGGGGTGGTTTAGCCTCCTGGCTc > 2:1175363/1‑143 (MQ=255) ggtggGGGCAGGTAGCGGGATCGCTTGACGGCCAGCGCTGGGTGTGCGGCCGGAGCGCAAACGCGATGGGGTTGTTTATCTGCCGTGCATTAAGCCGGAACCACGCCGCACTATTGGCCTGGTTTATCGTCCTGGCTCACCGc < 1:327818/143‑1 (MQ=255) ggtggCGGCAGGTAGCGGGATCACTTTACTGCCAGCGCTGGCTGTGCCGCCGGAGCGCAAACGCGATGGGGTTGTTTATCTGCCGTGCATTAAGCCGGAACCACGCCGCACTATTGGCCTGGTTTATCGTCCTGGCTCACCGc < 1:964636/143‑1 (MQ=255) gtggCGGCAGGTAGCGGGATCACTTTACTGCCAGCGCTGGCTGTGCCGCCGGAGCGCAAACGCGATGGGGTTGTTTATCTGCCGTGCATTAAGCCGGAACCACGCCGCACTATTGGCCTGGTTTATCGTCCTGGCTCACCGCt < 1:617135/143‑1 (MQ=255) ccagcAGGTAGCGGGATCGCTGTACTGCCAGCGCTGGCTGTGCCGCCGGATCGCAGACTCGATGTGGTTGTTTATCTGCCGTGCATTAAGCCGGAACCACGCCGCACTATTGGCCTGGTTTATCGTCCTGGCTCACCGCTgcg < 2:887564/140‑1 (MQ=255) | TGGCAGGGGAAAAACTGCTGATGCTGGAAGATGGTCACTGTTTGCGCGATCAGGCAATGGGTTTCTGTTTTGAAGCCGGGGCGGATGAAGATACACACTTCCGCGCGACCAGCCTGGAAACTCTGCGCAACATGGTGGCGGCAGGTAGCGGGATCACTTTACTGCCAGCGCTGGCTGTGCCGCCGGAGCGCAAACGCGATGGGGTTGTTTATCTGCCGTGCATTAAGCCGGAACCACGCCGCACTATTGGCCTGGTTTATCGTCCTGGCTCACCGCTGCGCAG > NC_000913/4159046‑4159328 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |