Predicted mutation
evidence seq id position mutation freq annotation gene description
MC JC NC_000913 3,815,859 Δ82 bp 100% [rph] [rph]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 3815859 3815940 82 108 [1] [1] 108 [rph] [rph]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 38158580 (0.000)93 (2.220) 68/244 NT 100% intergenic (‑90/+5) pyrE/rph orotate phosphoribosyltransferase/truncated RNase PH
?NC_000913 3815941 = 0 (0.000)coding (609/687 nt) rph truncated RNase PH

Only 100 of 110 total aligned reads displayed.

CCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3815707‑3815858
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCC  >  NC_000913/3815941‑3816081
                                                                                                                                                                                                                                                                                                      
CCAAACTTTAACCCCTGCTTGCTAAGCGCAAATCCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCCCCTCATCTTCCTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCC                                                                                                                                                        <  1:810838/143‑1
 CAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCG                                                                                                                                                       >  2:246553/1‑143
     CTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATATTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTATAAATCAGTTTGTAAGCGCCGCCgt                                                                                                                                                   >  1:154070/1‑141
           CACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCG                                                                                                                                             >  1:660565/1‑143
           CACCTCTTTGCTAAGCGCAAATTCGATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCTTCATCTTCCTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCG                                                                                                                                             <  1:229594/143‑1
             CCTGTTTGCTAAGCGCAAATGCAATAATCTGGCGCTGAAATGGTCGCATGCCTTCGCTCCTCATCTTACTTGTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTC                                                                                                                                           <  1:134841/143‑1
             CCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTC                                                                                                                                           <  2:767849/143‑1
                GCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTACCGTCCCC                                                                                                                                        >  1:871758/1‑143
                       AAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACCCATCAGTCGCCTTCAAAATCAGTTGGCCAGCGCCGCGTTGTCCCGCCCCCTGCccgt                                                                                                                                 >  2:804091/1‑139
                          CGCAAATTCAATAAACTGGGGGTGATATGGTTTCATGCCTGCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCGTCAGTCGCCTGAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAA                                                                                                                              <  2:583522/143‑1
                          CGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCGCATCTTACTTCTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAA                                                                                                                              <  1:222259/143‑1
                          CGCAAACACAAACAACTGCCGCTGATACGACTTCATACCTTCGCTCCACATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAACCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAA                                                                                                                              <  1:104422/143‑1
                           GCAAATTCATTAATCTGGCGCTGATATGGTTTCATGTCTTCGTTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAAT                                                                                                                             <  1:766302/143‑1
                           GCAAATTCAATAAACTGGCGCTGATATGGTTTCATGTCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTGAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCTTCCCCTGCACTTCAAT                                                                                                                             >  1:44161/1‑143
                           GCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAAT                                                                                                                             >  2:366384/1‑143
                           GCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAAT                                                                                                                             <  1:781109/143‑1
                             AAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAACAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGA                                                                                                                           >  1:185250/1‑143
                             AAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑‑AAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGAT                                                                                                                          <  1:866389/143‑1
                              AATTCAATACCCTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGAT                                                                                                                          <  1:202627/143‑1
                              AATTCAACAAACCGGGTCTGATCTGGTTTCATGCCTTCGCTCCTCATCTTCCTTTTCTACACAC‑AAAAAAACGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCCATGAT                                                                                                                          <  2:736360/143‑1
                                TTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTCAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGCCCCCTGCACCTCCATGATGC                                                                                                                        >  1:117716/1‑143
                                 TCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCG                                                                                                                       >  1:595856/1‑143
                                   AATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCCTCCCCCCCACTTCAATGATcctct                                                                                                                     >  1:398804/1‑138
                                    ATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCC                                                                                                                    >  1:57448/1‑143
                                    ATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCCCCTTCTGCCGTCCACTCCACTTCAATCATGCGCCC                                                                                                                    >  1:498045/1‑143
                                    ATAAACTGGCGCTGATATGGCTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCCATGATGCGCCC                                                                                                                    >  2:460423/1‑143
                                     TAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCG                                                                                                                   >  1:668157/1‑143
                                      AAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGCTTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGT                                                                                                                  >  1:218011/1‑143
                                           tGCGCTGATATGGCTTCATGCCTTCGCTCCTCATCCTACTGTTCTCCAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCG                                                                                                             <  1:348570/142‑1
                                            GCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCCACAGACAAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCG                                                                                                             <  1:246651/143‑1
                                            GCGCTGATATGGTTTCATGCCTTCGCTCCTAAACTAACAAATCTACAGAC‑AAAATAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCACGCGCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGG                                                                                                            >  1:791390/1‑143
                                               CTGATATGGGTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCA                                                                                                         <  1:278609/143‑1
                                                gcATATGGTTTCATGCCGTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCAT                                                                                                        <  2:52974/141‑1
                                                TGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTCAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCCCTTCAATGATGCGCCCGTCCTCGGTCAT                                                                                                        >  1:767963/1‑143
                                                     TGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACACAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTA                                                                                                   <  1:600089/143‑1
                                                     TGGTTTCATGCCTTCGCTCCTCATCTTACTTATCAACAGAC‑AAAAAAAAGGCGACTCATCACTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATCATCCGCCCCTCCTCCGCCATCACca                                                                                                   >  2:271991/1‑141
                                                      GGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTAC                                                                                                  >  1:436271/1‑143
                                                      GGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTAC                                                                                                  >  1:340292/1‑143
                                                      GGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCATGCACCTCGAGGGTGCGGCCGTCTTCGGTCATCACTgc                                                                                                  >  1:686286/1‑141
                                                       GTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACG                                                                                                 >  1:741816/1‑143
                                                        TTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGT                                                                                                >  2:450065/1‑143
                                                            ATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCCCTTCCATGATGCGCCCGTCTTCGGTCATCAATACGATCAT                                                                                            >  1:21033/1‑143
                                                             TGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAGAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCACCTGCCCTTCAATCATGCGCCCGTATTCGGTCAGCGCTACGTTCtgg                                                                                           >  2:414902/1‑140
                                                             TGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATTCTCCCATCTACAGTCATCACTACGTTCATG                                                                                           >  1:513889/1‑143
                                                                CTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCG                                                                                        >  1:809790/1‑143
                                                                CTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTCCATCTCG                                                                                        >  1:332843/1‑143
                                                                  TCGCTCCTCATCTTACTTTTCTACAGAC‑AGAACAAAGGCACCTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGT                                                                                      <  2:422396/143‑1
                                                                   gGCTCCTCATCTTACTGTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTC                                                                                     <  2:730100/142‑1
                                                                       gCTCATCTTGCTGTTGTACAGAC‑ACACTAAAGGCGACTCATCAGTCGCCTTAAACCTCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCATGGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTG                                                                                 <  2:367266/142‑1
                                                                       CCTCATCTTGCTTTTCTGAGCAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAACATCAGTTTGCCAGCGCCGCCGTCTGCCGTCCCCTGCACTTCAATGATGCGCTCGTCCTCGGTCCTCACTACGTTCATGTCGGTCTCTG                                                                                 <  1:890127/143‑1
                                                                       CCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACTCTCATGTCCGTCTCcg                                                                                 >  1:631314/1‑141
                                                                       CCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGCTCAGTTCGGTCTCTG                                                                                 >  2:416622/1‑143
                                                                        CTCATCGTAATGTTCTACGAAC‑AAACAAAAGGCGACTCATCCGTCGCGTTAAAAATCAGTTTGCCAGCGGCGCCGTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGC                                                                                <  2:840361/143‑1
                                                                          cgTCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGG                                                                              <  2:252801/141‑1
                                                                            TCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTGCCGTGCAGCTTGCGGGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCA                                                                            <  2:185250/143‑1
                                                                            TCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCCCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCA                                                                            <  1:188222/143‑1
                                                                                ACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCCCTGCGGCcgcgt                                                                        >  2:213912/1‑138
                                                                                   TTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTT                                                                     >  2:504065/1‑143
                                                                                       TACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAAC                                                                 <  1:591593/143‑1
                                                                                       TACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCACCTGCACTTCAATGATGCGCCCGACTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGCGTCTTCAAa                                                                 >  1:448977/1‑142
                                                                                        ACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCCCTACGTTCATGTCGGTCTATGCGGCAGAGTCTTCAACG                                                                >  2:228550/1‑143
                                                                                         CAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTACAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGCTGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTATGCGGCAGCGCCTTCAAagc                                                               >  2:724003/1‑140
                                                                                         CAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGT                                                               >  2:840790/1‑143
                                                                                          AGAC‑AAAAAACAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTA                                                              <  1:83540/143‑1
                                                                                            AC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGCTCATGTCGGTCTCTCCGGCAGAGCCTTCAACGcacg                                                            >  1:53023/1‑139
                                                                                                aagAAAAGGCGTCTCATCAGTCGCCTTAATAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCA                                                         <  2:606515/140‑1
                                                                                                 AAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCATAGATGCGCCCGTCTTCGGTCATCACTACGTCCCTGTCTGTCGCTGCGGCAGAGTCTTCAACGCATTCCAG                                                        >  2:719819/1‑143
                                                                                                  AAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGAGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATTTCGGTCTCTGCGGCAGAGTCTTAAACGAATTGCAGA                                                       >  2:215471/1‑143
                                                                                                  AAAAAGGCGACTCATCAGTCGCCTTAAAAACCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGCCTTCAACGTATTCGAGA                                                       >  1:890587/1‑143
                                                                                                  AAAAAGGCGACGCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGA                                                       <  1:150889/143‑1
                                                                                                  AAAAAGGCCACTCACCAGTCTCGCGAAAAATCAGTTTGCCAGCGCCGCCGTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCTGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGA                                                       <  2:649680/143‑1
                                                                                                     AAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCACGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCG                                                    <  1:148239/143‑1
                                                                                                       GGCGACTGATGAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCCACGTATTCCAGAACGCA                                                  >  2:238532/1‑143
                                                                                                        GCGACTGATGAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACGTCAATGATGCGCCCGTCTTCGGTCATGACTACGCGCATGTCGGTCGCGGCGGCGGAGTCTACGACGTATTCCAGAcaggaa                                                 >  2:649514/1‑137
                                                                                                        GCGACTCACCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAA                                                 <  1:184578/143‑1
                                                                                                          GACTCATCAGTCGCCTTAAAAATCAGTTTGGCCGCGCCGCCTGCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAAC                                               <  1:366384/143‑1
                                                                                                          GACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAAC                                               >  2:540316/1‑143
                                                                                                            CTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCG                                             <  1:166572/143‑1
                                                                                                             TCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGC                                            >  1:59668/1‑143
                                                                                                             TCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGCCGTCGGTCATCACTACGCTCATGTCGGTCTCTGCGGCACGGTCTTCAACGTATCCCAGATCGCcagccac                                            >  2:656091/1‑136
                                                                                                               ATCAGTCGCCTTAAAAATCAGTTTGACAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTGAATGTCGGGCGCTGCGGCGGGGTTCTCCACGTGTTCAAGATCGCAAACCGCTT                                          >  1:245440/1‑143
                                                                                                                      ggCTTAAAAATCAGGTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTT                                   <  1:39900/141‑1
                                                                                                                      GCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTT                                   >  1:653182/1‑143
                                                                                                                        taTAAAAAGCAGTTAGCCAACGCCGCCTTCTGCCGCCCCCCGCACTCCAATGATGCGCCCGTGTTCGGTCCTTACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCA                                 <  2:232542/141‑1
                                                                                                                         TTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTCCGGCAGAGTCTTCAACGCATTCCAGATCGCAACCCGCTTCGCCGTTCAC                                >  2:516733/1‑143
                                                                                                                          TAAAGATCAGTTGGCCAGCGCCGCCTTCTGCCGGCCCCCGCACTTCAATGATGCGCCCGTCTACGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACA                               <  1:446568/143‑1
                                                                                                                             AAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCCTCACCACGTTCATGTCGGGCTCCGCGCCAGAGTCTTCAACGTACTCCAGAACGCACACCGCATCGCCGTGCACAATT                            >  2:767332/1‑143
                                                                                                                             AAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGGTCcgcact                            >  2:726255/1‑137
                                                                                                                                  ggatgGCCAGCGCCGCCGTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGCCTTCGGTCATCACTATGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGAC                       <  1:302542/138‑1
                                                                                                                                  AGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCTCTTTGGTTGTACACCCACCTTCGGTCATCACTACGTTCATGTCGGTCGCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGAC                       <  1:878153/143‑1
                                                                                                                                         CAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACT                >  1:63845/1‑143
                                                                                                                                          AGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTG               >  2:141991/1‑143
                                                                                                                                           GCGCCGCCTTCTGCCGTCCCCTGCACTTCTATGATGCGTCCTTTTTCTGTTATCATTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGC              <  2:183111/143‑1
                                                                                                                                             GCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCCTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGG            >  2:340515/1‑143
                                                                                                                                               CGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCT          >  1:662113/1‑143
                                                                                                                                               CGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCACGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGAAAGAACGAGCGGCT          >  1:90003/1‑143
                                                                                                                                                 CCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATCCCGCCAGAAACTGCGGCCAC        >  2:492016/1‑143
                                                                                                                                                  CTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACC       <  2:57448/143‑1
                                                                                                                                                      ttCCGTCGCCCTCACTTCAATGATCCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCGCTGCGGCAGAGTCTTCAACGTATTCCAGATCTCAGACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCC   <  2:379424/141‑1
                                                                                                                                                       GCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTAACAATTCCGACAGAGATCGCGGCTACCCTCCC  >  1:225520/1‑143
                                                                                                                                                                                                                                                                                                      
CCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3815707‑3815858
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCC  >  NC_000913/3815941‑3816081

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.