New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4066692 =74 (1.630)4 (0.090) 3/256 NT 5.2% coding (503/1386 nt) yihP putative 2,3‑dihydroxypropane‑1‑sulfonate export protein
?NC_000913 4066745 = 75 (1.700)coding (450/1386 nt) yihP putative 2,3‑dihydroxypropane‑1‑sulfonate export protein

TCTTTCACGCCCGAGTAGCAGATCCACATAAACAGCAGGCCAAACAGTGAAAACAGCGTGGCGGCGAAGATATAGCCAAGTTGCTGATTACCTTCGATAAGATTCATAACTGGCACGAATCCCACCGTGCACAGCAGCAGGCCCAGCGTAGCGCCGCCCTGACGCCATGCCGCCAGTGAGGCGCGTTCGTTGGGGTTTTTGGTGATAGCGGGAACCATTGCGCCGTAGGAGCAGTTCATCATGCTGAAAAACAGTCCGTAAAGCATAAACAGAATAGTGGCCA  >  NC_000913/4066551‑4066833
                                                                                                                                             |                                                                                                                                              
tctTTCACGCCCGAGTAGCAGATCATCGTAAACTGCAGGCCCAACCGTGAAAACAGCGTGGCGGCGAAGATATAGCCAAGTTGCTGATTACCTTCGATAAGATTCATAACTGGCACGAATCCCCCCGTGCACAGCAGCAGGcc                                                                                                                                               >  2:777756/1‑143 (MQ=255)
 ctTTCACGCCCGAGTAGCAGATCCACATAAACAGCAGGCCAAACAGTGAAAACAGCGTGGCGGCGAAGATATAGCCAAGTTGCTGATTACCTTCGATAAGAGTCATAACTGGCACGAATCCCACCGTGCACAGCAGCAGGccc                                                                                                                                              >  1:335719/1‑143 (MQ=255)
  tttCACGCCCGAGTAGCAGATCCACATAAACAGCAGGCCAAACAGTGAAAACAGCGTGGCGGCGAAGATATAGCCAAGTTGCTGATTACCTTCGATAAGATTCATAACTGGCACGAATCCCACCGTGCACAGCAGCAGGCCCa                                                                                                                                             >  1:862488/1‑143 (MQ=255)
  tttCACGCCCGAGTAGCAGATCCACATAAACAGCAGGCCAAACAGTGAAAACAGCGTGGCGGCGAAGATATAGCCAAGTTGCTGATTACCTTCGATAAGATTCATAACTGGCACGAATCCCACCGTGCACAGCAGCAGGCCCa                                                                                                                                             >  1:618356/1‑143 (MQ=255)
  tttCACGCCCGAGTAGCAGATCCACATAAACAGCAGGCCAAACAGTGAAAACAGCGTGGCGGCGAAGATATAGCCAAGTTGCTGATTACCTTCGATAAGATTCATAACTGGCACGAATCCCACCGTGCACAGCAGCAGGCCCa                                                                                                                                             >  1:508640/1‑143 (MQ=255)
  tttCACGCCCGAGTAGCAGATCCACATAAACAGCAGGCCAAACAGTGAAAACAGCGTGGCGGCGAAGATATAGCCAAGGTGCTGATTACCTTCGATAAGATTCCTACCTGGCACGAATCCCACCGTGCACAGCAGCAGGCCCa                                                                                                                                             >  2:629616/1‑143 (MQ=255)
  gcgcgcccactttgccggcaccccgtttgatgtcaccggtaaaacggtgatggccactattctgtttatgctttacggactgtttttcagcatgatgaactgctcctacggcgcaatggttcccgctatcaccaaaaacCCCa                                                                                                                                             >  1:328161‑M1/140‑143 (MQ=255)
    tcgccaactttgtcggcacaccgtttgatgtcaccggtaaaacggtgatggccactattctgtttatgctttacggactgtttttcagcatgatgaactgctcctacggcgcgatggttcgcgctatcaccgaaaacCCCAGc                                                                                                                                           <  2:240111‑M1/6‑1 (MQ=255)
               tAGGAGATCCATATAAACAGCAGGCCAAACAGTGAAAACAGCGTGGCGGCGAAGATATAGCCAAGTTGCTGATTACCTTCGATAAGATTCATAACTGGCACGAATCCCACCGTGCACAGCAGCAGGCCCAGCGTAGCgccgcc                                                                                                                               <  1:221395/143‑1 (MQ=255)
               tAGCGGATCCGCATAAACAGCAGGCCAAACGGGGAAAGCAGCGTGGCGGCGAAGATATAGCCAAGTTGCTGATTACCTTCGATAAGATTCATAACTGGCACGAATCCCACCGTGCACAGCAGCAGGCCCAGCGTAGCgccgcc                                                                                                                               <  1:223941/143‑1 (MQ=255)
                   aGATCCACATAAACAGCAGGCCAAACAGTGAAAACAGCGTGGCGGCGAAGATATAGCCAAGGTGCTGATTCCCTTCGATAAGATTCATAACTGGCACGAATCCCACCGTGCACAGCAGCAGGCCCAGCGTAGCGCCGCCCTGa                                                                                                                           <  1:228142/143‑1 (MQ=255)
                    gATCCACATAAACAGCAGGCCAAACAGTGAAAACAGCGTGGCGGCGAAGATATAGCCAAGTTGCTGATTACCTTCGATAAGATTCATAACTGGCACGAATCCCACCGTGCACAGCAGCAGGCCCAGCGTCGCGCCGCACTGAc                                                                                                                          >  1:566299/1‑143 (MQ=255)
                    gATCCACATAAACAGCAGGCCAAACAGTGAAAACAGCGTGGCGGCGAAGATATAGCCAAGTTGCTGATTACCTTCGATAAGATTCATAACTGGCACGAATCCCACCGTGCACAGCAGCAGGCCCAGCGTAGCGGCGCCCTGAc                                                                                                                          >  1:872089/1‑143 (MQ=255)
                     aTCCACATAAACAGCAGGCCAAACAGTGAAAACAGCGTGGCGGCGAAGATATAGCCAAGTTGCTGCTTACCTTCGATAAGATTCATAACTGGCACGAATCCCACCGTGCACAGCAGCAGGCCCAGCGGCGCGCCGCCCTGACg                                                                                                                         >  2:660099/1‑143 (MQ=255)
                     aTCCACATAAACAGCAGGCCAAACAGTGAAAACAGCGTGGCGACGAAGATATAGCCAAGTTGCTGATTACCTTCGATAAGATTCATAACTGGCACGAATCCCACGGTGCACAGCAGCAGGCCCAGCGTAGCGCCGCCCTCACg                                                                                                                         >  1:282969/1‑143 (MQ=255)
                             aaaCAGCAGGCCAAACAGTGAAAACAGCGTGGCGGCGAAGATATAGCCAAGTTGCTGATTACCTTCGATAAGATTCATAACTGGCACGAATCCCACCGTGCACAGCAGCAGGCCCAGCGTAGGTTCCCCCTGACGCCATgccg                                                                                                                 >  2:572685/1‑143 (MQ=255)
                                 agcagGCCAAACAGTGAAAACAGCGTGGCGGCGAAGATATAGCCAAGTTGCTGATTACGTTCGATAAGATTCATAACTGGCACGAATCCCACCGTGCACAGCAGCAGGCGCAGCGTAGCGCCGCCCTGACGCCCTGACGCCAg                                                                                                             >  2:437133/1‑143 (MQ=255)
                                 agcagGCCAAACAGTGAAAACAGCGTGGCGGCGAAGATATAGCCAAGTTGCTGATTACCTTCGATAAGCTTCATAACTTGCCCGAATCCCACCGTGCACCGCAGCAGGCCCAGCGTCGCGCCGCCCTGCCGCCACgccccccg                                                                                                             >  2:542086/1‑141 (MQ=255)
                                 agcagGCCAAACAGTGAAAACAGCGTGGCGGCGAAGATATAGCCAAGTTGCTGATTACCTTCGATAAGATTCATAACTGGCACGAATCCCACCGTGCACAGCAGCAGGCCCAGCGTAGCGCCGCCCTGACGCCATGCCGCCAg                                                                                                             >  2:30427/1‑143 (MQ=255)
                                  gcagGCCACACAGCGAAAACAGCGTGGCGGCGAAGATATAGCCAAGTTGCCGATTACCTTCGATAATATTCATAACTTGCACGAATCCCACCGTGCACAGCATCAGGCCCAGCGTAGCGCCGCCCTGACGCCATGCCGCCAGt                                                                                                            <  1:75216/143‑1 (MQ=255)
                                     ggCCAAACAGTGAAAACAGCGTGGCGGCGAAGATATAGCCAAGTTGCTGATTACCTTCGATAAGAGTCATAACTGGCCCGAATCCCACCGTGCACAGCAGCAGGCCCAGCGTAGCGCCGCCCTGACGCCATGCCGCCAGTGAg                                                                                                         <  1:145849/143‑1 (MQ=255)
                                      gCCAAACAGTGAAAACAGCGTGGCGGCGAAGATATAGCCAAGTTGCTGATTACCTTCGATAAGATTCATAACTGGCACGAATCCCACCGTGCACAGCAGCAGGCCCAGCGTAGCGCCGCCCTGACGCCATGCCGCCAGTGAgg                                                                                                        <  2:646516/143‑1 (MQ=255)
                                       ccAAGCAGTGACGACAGCTTGGCGGCGAAGATATAGCCAAGTTGCTGATTACCTTCGATAAGATTCATCACCGGCACGAATCCCACCGTGCACAGCAGCAGGCCCAGCGTAGCGCCGCCCTGACGCCATGCCGCCAGTGAGgc                                                                                                       <  2:371272/143‑1 (MQ=255)
                                       ccAAACAGTGAAAACAGCGTGGCGGCGAAGATATAGCCAAGTTGCAGATAACCTTCGATCAGATTCATAACTGGCACGAATCCCACCGTGGACAGCAGCAGGCCCAGCGTAGCGACGCACAGGCGTCAGTGGGCCAGTGAgga                                                                                                       >  2:659208/1‑142 (MQ=255)
                                        gtaaaacggtgatggccactattctgtttatgctttacggactgtttttcagcatgatgaactgctcctacggcgcaatggttcccgctatcacgaagaacCCCAACGAACGCGCCGCCCTGACGCCATGCCGCCAGTGAGgc                                                                                                       >  1:391620‑M1/102‑143 (MQ=255)
                                        gtaaaacggtgatggccactattctgtttatgctttacggactgtttttcagcatgatgaactgctcctacggcgcaatggttcccgctatcaccaaaaacCCCAACGAACGCGCCGCCCTGACGCCATGCCGCCAGTGAGgc                                                                                                       >  1:312505‑M1/102‑143 (MQ=255)
                                            cAGTGAAAACAGCGTGGCGGCGAAGATATAGCCAAGTTGCTGATTACCTTCGATAAGCTTCATAACTGGCCCGAATCCCACCGTGCACAGCAGCAGGCCCAGCCTAGCGCCGCCCCGACGCCACGCCGCCGGTGAGGcgcgct                                                                                                  >  2:294184/1‑141 (MQ=255)
                                             cgTGAAAGCAGCGTGGCGGCGAAGATATAGCCAAGTTTCTGATTACCTTCGATAAGATTCATAACTGGCACGAATCCCACCGTGCACAGCAGCAGGCCCAGCGTAGCGCCGCCCTGACGCCATGCCGCCAGTGAGGCGcgttc                                                                                                 <  2:226408/142‑1 (MQ=255)
                                              gTGAAAACAGCGTGGCGGCGAAGATATAGCCAAGTTGCTGATTACCTTCGATAAGATTCATAACTGGCACGAATCCCACCGTGCACAGCAGCAGGCCCAGCGTAGCGCCGCCCTGAGGCCGTGCCTCCAGTGAGGCGcgttcg                                                                                                >  2:659927/1‑143 (MQ=255)
                                               tGAAAACAGCGTGGCGGCGAAGATATAGCCAAGTTGCTGATTACCTTCGATAAGATTCATAACTGGCACGAATCCCACCGTGCACAGCAGCAGGCCCAGCGTAGCGCCGCCCTGACGCCATGCCGCCAGTGAGGCGcgttcgg                                                                                               >  1:583816/1‑142 (MQ=255)
                                                 aaaaCAGCGTGGCGGCGAAGATATAGCCAAGTTGCTGATTACCTTCGATATGATTCATAACTGGCACGAATCCCACCGTGCACAGCAGCAGGCCCAGCGTAGCGCCGCCCTGACGCCATGCCGCCAGTGAGGCGCGTTCGTTg                                                                                             <  1:66979/143‑1 (MQ=255)
                                                          ttgcggcgAAGATATAGCCAAGTTGCTGATTACCTTCGATACGATGCTTATCTGGCACGCGTCGAACCGGGCACAGCAGCAGGCCCAGCGTAGCGCCGCCCTGACGCCATGCCGCCAGTGAGGCGCGTTCGTTGGGGTTTTTg                                                                                    <  2:664429/141‑1 (MQ=255)
                                                          tGGCGGCGAAGATATAGCCAAGTCGCTGATTACCTTCGATAAGCTTCATAACTGGCACGAACCCCACCGTGCACAGCAGCAGGCCCAGCGTAGCGCCGCCCTGACGCCATGCCGCCAGTGAGGCGCGTTCGTTGGGGTTTTTg                                                                                    <  2:410736/143‑1 (MQ=255)
                                                           tattctgtttatgctttacggactgtttttcagcatgatgaactgctcctacggcgcaatggttcccgctatcaccaaaaacCCCAGCGGAGCGCCGCCCTGACGCCATGCCGCCAGTGAGGCGCGTTCGTTGGGGTTTTTgg                                                                                   >  2:335509‑M1/83‑143 (MQ=255)
                                                                 ggaGATAGAGCCAGTCTGCTCATTACCTTCGATAAGATTCATAACTGGCACGAATCCCACCGTGCACAGCAGCAGGCCCAGCGTAGCGCCGCCCTGACGCCATGCCGCCAGTGAGGCGCGTTCGTTGGGGTTTTTGGTGATAg                                                                             <  2:804112/141‑1 (MQ=255)
                                                                    gATATAGCCAAGTTGCTGATTACCTTCGATAAGATTCATAACTGGCACGAATCCCACCGTGCACAGCAGCAGGCCCAGCGTAGCGCCGCCCTGACGCCATGCCGCCAGTGAGGCGCGTTCGTTGGGGCTTTTGGTGATAGCgg                                                                          >  1:52219/1‑143 (MQ=255)
                                                                     atatAGCCAAGTTGCTGATTACCTTCGATAAGATTCATAACTGGCACGAATCCCACCGTGCACAGCAGCAGGCCCAGCGTAGCGCCGCCCTGACGCCATGCCGCCAGTGAGGCGCGTTCGTTGGGGTTTTTGGTGATAGCggg                                                                         >  1:662466/1‑143 (MQ=255)
                                                                       gtaGCCACGTTGCTGATTCCCTCCGCTAAGATTCCTAGCTGGCACGAATCCCACCGTGCACAGCAGCAGGCCCAGCGTAGCGTCGCCCTGTCGCCATGCCGCCAGTGAGGCGCGTTCGTTGGGGTTTTTGGTGATAGCGGGaa                                                                       <  2:835386/142‑1 (MQ=255)
                                                                       ataGCCAAGTTGCTGATTACCTTCGATAAGATTCATAACTGGCACGAATCCCACCGTGCACAGCAGCAGGCCCAGCGTAGCGCCGCGCTGAACCTAGGCCGCCAGTGAGGCGCGTTCGTTGGGGTTTTTGGTGATAGCGGGaa                                                                       >  1:644516/1‑143 (MQ=255)
                                                                       ataGCCAAGTTGCTGATTACCTTCGATAAGATTCATAACTGGCACGAATCCCACCGTGCACAGCAGCAGGCCCAGCGTAGCGCCGCCCTGGAGACATGCCGCCAGTCAGGCGCGTTCGTTGGGGCTGTTGGTGATAGCGGGac                                                                       >  1:240111/1‑142 (MQ=255)
                                                                         aGCCAAGTTGCTGATTACCTTCGATAAGATTCATAACTGGCACGAATCCCACCGTGCACAGCAGCAGGCCCAGCGTCGCGCCGCCCTGACGCCATGCCGCCAGTGAGGCGCGTTCGTTCAGATTTTTGGTGATAGCGGGaaac                                                                     >  1:329167/1‑141 (MQ=255)
                                                                         aGCCAAGTTGCTGATTACCTTCGATAAGATTCATAACTGGCACGAATCCCACCGTGCACAGCAGCAGGCCCAGCGTAGCGCCGCCCTGACGCCATGCCGCCCGTGAGGCGCGTTCGTTGGGGTTTTTGGGGATAGCGGGAGcc                                                                     >  1:290035/1‑143 (MQ=255)
                                                                           ccAAGTTGCTGATTACCTTCGATAAGATTCATAACTGGCACGAATCCCACCGTGCACAGCAGCAGGCCCAGCGTAGCGCCGCCCTGACGCCATGCCGCCAGTGAGGCGCGTTCGTTGGGGTTTTTGGTGATAGCGGGAACCAt                                                                   >  1:539052/1‑143 (MQ=255)
                                                                           ccAAGTTGCTGATTACCTTCGATAAGATTCATAACTGGCACGAATCCCACCGTGCACAGCAGCAGGCCCAGCGTAGCGCCGCCCTGACGCCATGCCGCCAGTGAGGCGCGTTCGTTGGGGTTTTTGGTGACAGCGGGAACCAt                                                                   >  1:98857/1‑143 (MQ=255)
                                                                           ccAAGTTGCTGATTACCTTCGATAAGATTCATAACTGGCACGAATCCCACCGTGCACAGCAGCAGGCCCAGCGTAGCGCCGCCCTGACGCCATGCCGCCAGTGAGGCGCGTTCGTTGGGGTGATTGGTGATAGCGGGCACCAt                                                                   >  1:399898/1‑143 (MQ=255)
                                                                           ccAAGTTGCCGCTTACCTTCGATAAGATTCCTAACTGGCACGAAGCCCACCGTGCACAGCAGCAGGCCCAGCGTAGCGCCGCCCTGACGCCATGCCGCCAGTGAGGCGCGTTCGTTGGGGTTTTTGGTGATAGCGGGAACCAt                                                                   <  2:120729/143‑1 (MQ=255)
                                                                            ccggtctgtttttcagaatgatgaactgctcctacggcgcaatggttcccgctatcaccaaaaacCCCAGCGTAGCGCCGCCCTGACGCCATGCCGCCAGTGAGGCGCGTTCGTTGGGGTTTTTGGTGATAGCGGGAACCAtt                                                                  >  1:615378‑M1/66‑143 (MQ=255)
                                                                            catgTTGCTGATTAGCTTCGTTTGGGTTCATAACTGGCACGTATCCCACCGTGCACAGCAGCAGGCCCAGCGTAGCGCCGCTCTGACGCCATGCCGCCAGTGAGGCGCGTTCGTTGGGGTTTTTGGTGATAGCGGGAACCAtt                                                                  <  2:442469/140‑1 (MQ=255)
                                                                                    tGATTACCTTCGATAAGATTCATAACTGGCACGAATCCCACCGTGCACAGCAGCAGGCCCAGCGTGGCGCCGCCCTGACGCCATGCCGCCAGTGAGGCGCGGTCGTGGGGGTTTTTGGTGATAGAGGGAATCACTGCGCGGTa                                                          >  2:211332/1‑143 (MQ=255)
                                                                                    tGATTACCTTCGATAAGATTCATAACTGGCACGAATCCCACCGTGCACAGCAGCAGGCCCAGCGTAGCGCCGCCCTGACGCCATGCCCCCAGTGAGGCGCGTTCGTTGGGGTTTTTCGTGACAGCGGGAACCATTCCGCCGTa                                                          >  2:753956/1‑143 (MQ=255)
                                                                                    tGATTACCTTCGATAAGATTAATAACTGGCACGAATCCCACCGTGCACAGCAGCAGGCCCAGCGTAGCGCCGCCCTGACGCCATGCCGCCAGTGAGGCGCGTTCGTTGGGGTTTTTGGTGATAGCGGGAACCATTGCGCCGTa                                                          >  2:66976/1‑143 (MQ=255)
                                                                                     gATTACCTTCGATAAGATTCATAACTGGCACGAATCCCACCGTGCACAGCAGCAGGCCCAGCGTAGCGCCGCGCTGACGCCATGCCGCCAGTGAGGCGCGTTCGTTGGGGCTTTCGGCGATAGCGGGCACCATTGCGCCGTAg                                                         >  2:74974/1‑143 (MQ=255)
                                                                                      aTTACGTTCGATAAGATTCATAACTGGCACGAATCCCACCGTGCACAGCAGCAGGCCCAGCGTAGCGCCGCCCTGACGCCATGCCGCCAGTGAGGCGCGTTCGTTGGGGTTTTTGGTGATAGCGGGAACCATTGCGCCGTAgg                                                        <  1:385499/143‑1 (MQ=255)
                                                                                      aTTACCTTCGATAAGATGCATAACTGGCACGAATCCCACCGTGCACAGCAGCAGGCCCAGCGTAGCGCCGCCCTGACGCCATGCCGCCAGTGAGGCGCGTTCGTTGGGGTTTTTGGTGATAGCGGGAACCATTGCGCCGTAgg                                                        <  1:389061/143‑1 (MQ=255)
                                                                                       ttACCTTCGATAAGATTCATAACTGGCACGAATCCCACCGTGCACAGCAGCAGGCCCAGCGTAGCGCCGCCCTGACGCCATGCCGCCAGTGAGGCGCGTTCGTTGGGGTTTTTGGTGATAGCGGGAACCATTGCGCCGTAGGa                                                       <  1:866901/143‑1 (MQ=255)
                                                                                           cTTCGATAAGATTCATAACTGGCACGAATCCCACCGTGCACAGCAGCAGGCCCAGCGTAGCGCCGCCCTGACGCCATGCCGCCAGTGAGGCGCGTTCGTTGGGGTTTTTGGTGATAGCGGGCACCATTGCGCCGTAGGAGccg                                                   >  2:833773/1‑141 (MQ=255)
                                                                                           cTTCGATAAGATTCATAACTGGCACGAATCCCACCGTGCACAGCAGCAGGCCCAGCGTAGCGCCGCCCTGACGCCATGCCGCCAGTGAGGCGCGTTCGTTGGGGTTTTTGGTGATAGCGGGAACCATTGCGCCGTAGGAGCAg                                                   >  2:472408/1‑143 (MQ=255)
                                                                                           cTTCGATAAGATTCATAACTGGCACGAATCCCACCGTGCACAGCAGCAGGCCCAGCGTAGCGCCGCCCTGACGCCATGCCGCCAGTGAGGCGCGTTCGTTGGGGTTGTTGGTGATAGCGTTAACGATTGCGCCGTAGGAGCAg                                                   >  2:345490/1‑143 (MQ=255)
                                                                                            ttCGATAAGATTCATAACTGGCACGAATCCCACCGTGCACAGCAGCAGGCCCAGCGTAGCGCCGCCCTGACGCCATGCCGCCAGTGAGGCGCGTTCGTTGGGGTTTTTGGTGATAGCGGGAACCATTGCGCCGTAGGAGCAGt                                                  >  2:135366/1‑143 (MQ=255)
                                                                                              cGATAAGATTCATAACTGGCACGAATCCCACCGTGCACAGCAGCAGGCCCAGCGTAGCGCCGCCCTGACGCCATGCCGCCAGTGAGGCGCGTTCGTTGGGGTTTTTGGTGATAGCGGGAACCATTGCGCCGTAGGAGCAGTtc                                                <  1:30427/143‑1 (MQ=255)
                                                                                                 tacgATTCCTAACTGGCACGAGTCCCACCGTGCACAGCAGCAGGCCCAGCGTAGCGCCGCCCTGACGCCAGGGCGCCAGTGAGGCGCGTTCGTTGGGGTTTTTGGTGATAGCGGGAACCATTGCGCCGTAGGAGCAGTtcatc                                             <  2:540480/140‑1 (MQ=255)
                                                                                                 tAAGATTCATAACTGGCACGAATCCCACCGTGCACAGCAGCAGGCCCAGCGTAGCGCCGCCCTGACGCCATGCCGCCAGTGAGGCGCGTTCGTTGGGGTTTTTGGTGATAGCGGGAACCATTGCGCCGTAGGAGCAGTtcatc                                             <  2:407660/143‑1 (MQ=255)
                                                                                                 tAAGATTCATAACTGGCACGAATCCCACCGTGCACAGCAGCAGGCCCAGCGTAGCGCCGCCCTGACGCCATGCCGCCAGTGAGGCGCGTTCGTTGGGGTTTTTGGTGATAGCGGGAACCATTGCGCCGTAGGAGCAGTtcatc                                             <  1:63234/143‑1 (MQ=255)
                                                                                                   aGATTCATAACTGGCACGAATCCCACCGTGCACAGCAGCAGGCCCAGCGTAGCGCCGCCCTGACGCCATGCCGCCAGTGAGGCGCGTTCGTTGGGGTTTTTGGTGATAGCGGGAACCATTGCGCCGTAGGAGCAGTTcatcat                                           >  1:305572/1‑143 (MQ=255)
                                                                                                    gATTCATAACTGGCACGAATCCCACCGTGCACAGCAGCAGGCCCAGCGTAGCGCCGCCCTGACGCCATGCCGCCAGTGAGGCGCGCTCGCTGGGGTTTCTGGTGATAGCGGGAACCATAGCGACGTAGGAGCAGTtcatcaag                                          >  2:867548/1‑141 (MQ=255)
                                                                                                    gATTCATAACTGGCACGAATCCCACCGTGCACAACAGCAGGCCCAGCGTAGCGCCGCCCTGACGCCATCCCGCCAGTGAGGCGCGTTCGTTGGGGTTTTTGGTGATAGCGGGAACCATTGCGCTGTAGGAGCAGTtcaacaag                                          >  2:542148/1‑141 (MQ=255)
                                                                                                    gATGCATAACTGGCACGAATCCCACCGTGCACAGCAGCAGGCCCAGCGTAGCGCCGCCCTGACGCCATGCCGCCAGTGAGGCGCGTTCGTTGGGGTTTTTGGTGATAGCGGGAACCATTGCGCCGTAGGAGCAGTTCATCATg                                          <  2:773085/143‑1 (MQ=255)
                                                                                                         aTAACTGGCACGAATCCCACCGTGCACAGCAGCAGGCCCAGCGTAGCGCCGCCCTGACGCCATGCCGCCAGTGAGGCGCGTTCGTTGGGGTTTTTGGTGATAGCGGGAACCATTGCGCCGTAGGAGCAGTTCATCATGCTGaa                                     <  2:862488/143‑1 (MQ=255)
                                                                                                          tAACTGGCACGACTCCCACCGTGCACAGCAGCAGGCCCAGCGTAGCGCCGCCCTGCCGCCATGCCGCCAGTGAGGCGCGTTCGTTGGGGATTTTGGTGATGGCGGGAACCATTGCGCCGTAGGAGCGGTGCATCATGGTGgaa                                    >  2:511551/1‑143 (MQ=255)
                                                                                                          tAACTGGCACGAATCCCACCGTGCACAGCAGCAGGCCCAGCGTAGCGCCGCCCTGACGCCCTGCCGCCAGTGAGGCGCGTTCGTTGGGGTCTTTGGTGATCGCGGGAACCATTGCGCCGTAGGCGCCGTCCATCATGCTGgaa                                    >  1:154602/1‑143 (MQ=255)
                                                                                                          tAACTGGCACGAATCCCACCGTGCACAGCAGCAGGCCCAGCGTAGCGCCGCCCTGACGCCATGCCGCCAGTGAGGCGCGTTCGTTGGGGCTTTTGGTGATAGCGGGAACCATTGCGCCGTAGGAGCAGGTCATCATGCTTaaa                                    >  2:514976/1‑143 (MQ=255)
                                                                                                           aaCTGGCACGAATCCCACCGTGCACAGCAGCAGGCCCAGCGTAGCGCCGCCCTGACGCCATGCCGCCAGTGAGGCGCGTTCGTTGGGGTTTTTGGTGATAGCGGGATCCATTGCGCCGTAGGAGCAGTTCATCATGCTGaaaa                                   <  1:572685/143‑1 (MQ=255)
                                                                                                           aaCTGGCACGAATCCCACCGTGCACAGCAGCAGGCCCAGCGTAGCGCCGCCCTGACGCCATGCCGCCAGTGAGACGCGGTCGTTGGGGTTTTTGGTGATAGCGGGAACCATTGCGCCGTAGGAGCAGTTCATCATGCTGaaaa                                   <  1:795119/143‑1 (MQ=255)
                                                                                                              tGGCACGAATCCCACCGTGCACAGCAGCAGGCCCAGCGTAGCGCCGCCCTGACGCCATGCCGCCAGTGAGGCGCGTTCGTTGGGGTTTTTGGTGATAGCGGGAACCATTGCGCCGTAGGAGCAGGCCATCAGGCGGAAAAAcc                                >  2:835164/1‑142 (MQ=255)
                                                                                                              ggccACGCAACCCCCCGGGCCCAGCAGCAGGCCCAGCGCCGCGCCGCCCGGACGCCGTGCCGCCAGTGAGGCGCGTGCGGTGGGGTGTTTGGTGATAGCCGGAACCATTGCGCCGTAGGAGCAGTTCATCATGCTGAAAAACa                                <  2:354783/140‑1 (MQ=255)
                                                                                                               ggCACGAATCCCACCGTGCACAGCAGCAGGCCCAGCGTAGCGCCGCCCTGACGCCATGCCGCCAGGGAGGCGCGTTCGTTGGGGTTTTGGTGATAGCGGGAACCATTGCGCCGTAGGAGCAGTTCATCATGCTGAACAACAGt                              >  1:264868/1‑143 (MQ=255)
                                                                                                                gCACGAATCCCACCGTGCACAGCAGCAGGCCCAGCGTAGCGCCGCCCTGACGCCATGCCGCCAGTGAGGCGCGTTCGTTGGGGTTTTTGGTGATAGCGGGAACCATTGCGCCGTAGGAGCAGTTCATCATGCTGAAAAACAGt                              <  1:586294/143‑1 (MQ=255)
                                                                                                                     cagcccACCGTGCACAGCGGCAGGCCCAGGGGAGCGCCGCCCTGACGCCATGCCGCCAGTGAGGCGCGTTCGGTGGGGTTTTTGGTGATAGCGGGAACCATTGCGCCGTAGGAGCAGTTCATCATGCTGAAAAACAGTCCGTa                         <  2:833335/140‑1 (MQ=255)
                                                                                                                     aaTCCCACCGTGCACAGCAGCAGGCCCAGCGTAGCGCCGCCCTGACGCCATGCCGCCAGTGAGGCGCGTTCGTTGGGGTTTTTGGTGATAGCGGGAACCATTGCGCCGTAGGAGCAGTTCATCATGCTGAAAAACAGTCCgga                         >  2:1524/1‑141 (MQ=255)
                                                                                                                      aTCCCACCGTGCACAGCAGCAGGCCCAGCGTAGCGCCGCCCTGACGCCATGCCGCCAGTGAGGCGCGTTCGTTGGGGTTTTTGGTGATAGCGGGAACCATTGCGCCGTAGGAGCAGTTCCTCATGCTGACAAACAGTCCGTaa                        >  2:569556/1‑143 (MQ=255)
                                                                                                                         ccACCGTGCACAGCAGCAGGCCCAGCGTAGCGCCGCCCTGACGCCATGCCGCCAGTGAGGCGCGTTCGTTGGGGTTTTTGGTGATAGCGGGAACCATTGCGCCGTAGGAGCAGTTCATCATGCTGAAAAACAGTCCGTAAAGc                     <  1:779364/143‑1 (MQ=255)
                                                                                                                         ccACCGTGCACAGCAGCAGGCCCAGCGTAGCGCCGCCCTGACGCCATGCCGCCAGTGAGGCGCGGTCGTTGGGGTTTTTGGTGATAGCGGGAACCATTGCGCCGTAGGAGCAGTTCATCATGCTGAAAAACAGTCCGTAAAGc                     >  2:99068/1‑143 (MQ=255)
                                                                                                                              gTGCACAGCAGCAGGCCCAGCGTAGCGCCGCCCTGACGCCATGCCGCCAGTGAGGCGCGTTCGTTGGGGTTTTTGGTGATAGCGGGAACCATTGCGCCGTAGGAGCAGTTCATCATGCTGAAAAACAGTCCGTAAAGCATaaa                <  1:725943/143‑1 (MQ=255)
                                                                                                                                  acaGCAGCAGGCCCAGCGTAGCGCCGCCCTGACGCCATGCCGCCAGTGAGGCGCGTTCGTTGGGGTTTTTGGTGATAGCGGGAACCATTGCGCCGTAGGAGCAGTTCATCATGCTGAAAAACAGTACGTAAAGCATAAACAGa            >  1:872153/1‑143 (MQ=255)
                                                                                                                                     tcagccgGCCCAGGTTATCTCCGCCCTTACGCCCTGTCTGCAGGGAGCCGCGTTCGTTGTGGTTTTTGGTGACAGCGGGAACCATTGCGCCGTATGAGCAGTTCATCATGCTGAAAAACAGTCCGTAAAGCATAAACAGAATa         <  2:565130/142‑1 (MQ=255)
                                                                                                                                     gcagcagGCTCAGCGTAGCTCCGCCCTGACGCCATGCCGCCAGTGAGTCGCGTTCGTTGGGGTTTTTGGTGATAGCGGGAACCACTGCGCCGTAGGAGCAGTTCATCATGCTGAAAAACAGTCCGTAAAGCATAAACAGAATa         <  2:551870/143‑1 (MQ=255)
                                                                                                                                           ggCCCGGGGTGGCGCCGCCCGGGCGCCATGCCGCCGGTGAGGCGCGTTCGTTGGGGTTTTTGGTGCTATCGGGAACCATTGCGCCGTAGGAGCAGTTCATCACGCTGAAAAACAGTCCGTAACGCATAAACAGAATAGTGGcc   <  2:500142/143‑1 (MQ=255)
                                                                                                                                            gCCCAGCGTAGCGCCGCCCTGACGCCATGCCGCCAGTGAGGCGCGTTCGTTGGGGTTTTTGGTGATAGCGGGAACCATTGCGCCGTAGGAGCAGTTCATCATGCTGAAAAACAGTCCGTAAAGCATAAACAGAATAGTGGCCa  >  2:603578/1‑143 (MQ=255)
                                                                                                                                             |                                                                                                                                              
TCTTTCACGCCCGAGTAGCAGATCCACATAAACAGCAGGCCAAACAGTGAAAACAGCGTGGCGGCGAAGATATAGCCAAGTTGCTGATTACCTTCGATAAGATTCATAACTGGCACGAATCCCACCGTGCACAGCAGCAGGCCCAGCGTAGCGCCGCCCTGACGCCATGCCGCCAGTGAGGCGCGTTCGTTGGGGTTTTTGGTGATAGCGGGAACCATTGCGCCGTAGGAGCAGTTCATCATGCTGAAAAACAGTCCGTAAAGCATAAACAGAATAGTGGCCA  >  NC_000913/4066551‑4066833

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.