| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,449,050 | T→A | 7.8% | intergenic (+32/+26) | feaB → / ← tynA | phenylacetaldehyde dehydrogenase/copper‑containing amine oxidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,449,050 | 0 | T | A | 7.8% | 255.1 / 13.2 | 95 | intergenic (+32/+26) | feaB/tynA | phenylacetaldehyde dehydrogenase/copper‑containing amine oxidase |
| Reads supporting (aligned to +/- strand): ref base T (57/28); new base A (3/4); total (63/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.32e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.45e-03 | |||||||||||
ACGCTAACTTACCGTTTGGTGGGATGAAGCAGTCAGGAACGGGCCGTGATTTTGGCCCCGACTGGCTGGACGGTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCG‑TTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGTTCCATGGTTTCAGCAGAGTATGTACCCATTCGGTCGGCATAATCGGCCACTCTTCGGCGCGGGC > NC_000913/1448909‑1449189 | aCGCTAACTTACCGTTTGGTGGGATGAAGCAGTCAGGAACGGGCCGTGATTTTGGCCCCGACTGGCTGGACGGTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTg > 2:195025/1‑143 (MQ=255) gttAACTTACTGTTTGGTGGGATGAAGCAGTCAGGAACGGGCCGTGATTTTGGCCCCGACTGGCGGGAGGGTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGt < 1:254031/141‑1 (MQ=255) gCTAACTTACCGTTTGGTGGGATGAAGCAGTCAGGAACGGGCCGTGATTTTGGCCCCGACTGGCTGGAGGGTTGGTGTGAAACTAAGTCGGTGTGCGTACGGGAGTAATCTGGGTCGCTCATAAGTAACAAAGCGCATCTgat > 2:801917/1‑141 (MQ=255) gCTAACTTACCGTTTGGTGGGATGAAGCAGTCAGGAACGGGCCGTGATTTTGGCACCGACTGGCTGGACGGTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTGATAAGTAAAAACCGGCACCTGGt > 1:491362/1‑143 (MQ=255) cTAACTTACCGTTTGGTGGGATGAAGCAGTCAGGAACGGGCCGTGATTTTGGCCCCGACTGGCTGGACGGTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTg < 1:665605/143‑1 (MQ=255) cTAACTTACCGTTTGGTGGGATGAAGCAGTCAGGAACGGGCCGTGATTTTGGCCCCGACTGGCTGGACGGTTGGTGTGAAACTAAGTCGGTGTGTGTAAGGGATTAATCTGGTTCGCTCATAAGTAAAAAACAGCACATGGTg > 1:833031/1‑143 (MQ=255) ttACCGTTTGGTGGGATGAAGCAGTCAGGAACGGGCCGTGATTTTGGCGCCGACTGGCTGGACGGGTGGTGGGAAACTAAGTCGGTGAGAGGACGGTATTAATGTGGTTCGCTCATAAGTAAAAAACGGCACGTGGTGCCggt > 2:436741/1‑141 (MQ=255) ttACCGTTTGGTGGGATGAAGCAGTCAGGAACGGGCCGTGATTTTGGCCCCGACTGGCTGGACGGTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCG‑tt > 1:58262/1‑143 (MQ=255) ttACCGTTTGGTGGGATGAAGCAGTCAGGAACGGGCCGTGATTTTGGCCCCGACTGGCTGGACGGTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCG‑tt > 2:789829/1‑143 (MQ=255) tACCGTTTGGTTGGATGAAGCAGTCAGGAACGGGCCGTGATTTTGGCCCCGACTGGCTGGACGGTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCAGGTGCCG‑ttt < 1:67608/143‑1 (MQ=255) tACCGTTTGGTGGGATGAAGCAGTCAGGAACGGGCCGTGATTTTGGCCCCGACTGGCTGGACGGTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCAGGTGCCG‑ttt < 1:407038/143‑1 (MQ=255) atcGTTTGGGGGGATCAAGCAGTCAGGAACGGACCGTGATTTTGGCCCCTACTGGCTGGACGGTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCAGGTGCCG‑tttt < 2:402055/141‑1 (MQ=255) gTTTGGTGGGATGAAGCAGTCAGGAACGGGCCGTGATTTTGGCCCCGACTGGCTGGACGGTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAACAAACGGCACCTGGTGCCG‑ttttttt > 1:127525/1‑143 (MQ=255) gTTCGGTGGGATGAAGCAGTCAGGAACGGGCCGTGATTTTGGCCCCGACTGGCTGGACGGTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCG‑ttttttt < 1:19580/143‑1 (MQ=255) gtggGATGAGGCAGGCAGGAGCGGGCCGTGATTTTGGCCCCCACTGGCTGGACGGTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCAGGTGCCG‑ttttttacttat < 1:740374/143‑7 (MQ=255) gtggGATGAAGCAGTCAGGAACGGGCCGTGATTTTGGCCCCGACTGGCTGGACGGTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATGAGTAAAAAACGGCACCTGGTGCCG‑TTTTTTTGTCTg > 1:355211/1‑143 (MQ=255) tggGATGAAGCAGTCAGGAACGGGCCGTGATTTTGGCCCCGACTGGCTGGACGGTGGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCG‑TTTTTTTGTCTGa > 2:188449/1‑143 (MQ=255) gggATGAAGCAGTCAGGAACGGGCCGTGATTTTGGCCCCGACTGGCTGGACGGTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCG‑TTTTTTTGTCTGaa < 1:423384/143‑1 (MQ=255) tgATGAAGCAGTCAGGAACGGGCCGTGATTTTGGCCCCGACTGGCTGGACGGTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCG‑TTTTTTTGTCTGaaa < 2:758196/142‑1 (MQ=255) ggATGAAGCAGTCAGGAACGGGCCGTGATTTTGGCCCCGACTGGCTGGACGGTTGGTGTGAAACTAAGTCGGTGGGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCG‑TTTTTTTGTCTGaaa < 2:496225/143‑1 (MQ=255) gATGAAGCAGTCAGGAACGGGCCGTGATTTTGGCCCCGACTGGCTGGACGGTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCCACGGGAGCCG‑TTGTTTTGTCTGCAAc > 2:32563/1‑143 (MQ=255) aTGAAGCAGTCAGGAACGGGCCGTGATTTTGGCCCCGACTGGCTGGACGGTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGGTCGCTCATAAGTAAAAAACGGCACCTGGTGCCG‑TTTTTTTGTCTGAAACa > 1:741849/1‑143 (MQ=255) aGCAGTCAGGAACGGGCCGTGCTTTTGGCCCCGACTGGCTGGACGGTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTAGCGCAGACGTAAGCGGAGGCGACCGGTGCCG‑TTTTTTTGTGTGAAACAATCa > 2:816449/1‑143 (MQ=255) cAGGAACGGGCCGTGATTTTGGCCCCGACTGGCTGGACGGTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCG‑TTTTTTTGTCTGAAACAATCACTTAtc < 1:528695/143‑1 (MQ=255) gAACGGGCCGTGATTTTGGCCCCGACTGGCTGGACGGTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCG‑TTCTTTTGTCTGAAACAATCACTTAtcttt > 2:553931/1‑143 (MQ=255) aCGGGCCGTGATTTTGGCCCCGACTGGCTGGACGGTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTCATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGCGCCG‑TTTTTTTGGCTGGGACAATCACTTAtctacct > 1:279599/1‑139 (MQ=255) cGGGCCGTGATTTTGGCCCCGACTGGCTGGACGGTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCG‑TTTTTTTGTCTGAAACAATCACTTAtctttctt < 1:565967/143‑1 (MQ=255) gggCCGTGATTTTGGCCCCGACTGGCTGGACGGTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCAACTGGTGCCG‑TTTGTTTGTGTGAAACAATCCACTATATttcttc > 2:332586/1‑143 (MQ=255) ccGTGATTTTGGCCCCGACTGGCTGGACGGTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCCCCTGGTGCCG‑CTTTTTTATCTGAAACAATCACTTATCTTTCTTCCgc > 2:645988/1‑143 (MQ=255) gTGATTTTGTCTCCGACTGGCTGGATGGTTCGTGTGATACTAAGTCGGTGTGTGGACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCG‑TTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAgcgc < 1:249552/143‑1 (MQ=255) gTGATTTTGGCCCCGACTGGCTGTACGGTTGGTTGGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCG‑TTTTTTTGTCTGAAACACTCACTTATCTTTCTTCAgcga > 1:189176/1‑142 (MQ=255) gTGATTTTGGCCCCGACTGGCTGGACGGTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCAACCGGTGCGG‑CGGCATGGTCTGAAACAATCCCTTATCTTTCTTCAgagc > 2:860485/1‑143 (MQ=255) tGATTTTGGCCCCGACTGGCTGGACGGTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCG‑TTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGcc > 2:715666/1‑143 (MQ=255) tGATTTTGGCCCCGACTGGCTGGACGGTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCG‑TTTTTTTGTCTGAAACAATCACTTAACTTTCTTAAGCGcc > 1:415828/1‑143 (MQ=255) tttGGCCCCGACTGGCTGGACGGTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCG‑TTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCCCCCCTa > 1:760355/1‑143 (MQ=255) ccccGACTGGCTGGACGGTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCG‑TTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGtt > 2:278374/1‑143 (MQ=255) cccGACTGGCTGGACGGTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCG‑TTTTTTTGTCTGAAACAATCCCTTATCTTTCTTCAGCCCCCCTAGCGTTg > 2:117119/1‑143 (MQ=255) cccGACTGGCTGGACGGTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCG‑GTTTTTTGTCTGAAACAATCGATTATCTTTCGTCAGCGCCCCTAggcttc > 1:395169/1‑138 (MQ=255) aCTGTCTGGACGGTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTATCCTGGTTCGCGCATAAGTAAAAAACGACACCTTGTGCCG‑TTTTTTTATCTGAAACAATCACTTATCTTTGTTCAGCGTCCCTAGCGTTGGCga > 2:848800/1‑142 (MQ=255) gctggACGGTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCG‑TTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCg > 2:685176/1‑143 (MQ=255) ctggACGGTGGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCG‑TTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGt < 2:235745/143‑1 (MQ=255) gACGGTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCG‑TTTTTTTGTCTGAAAGAATCACTTATCTTTCTTGAGCGCCCGTAGCGTTGGCGTGTGGTCaa > 1:448419/1‑143 (MQ=255) ccgcttGGTGTGAAACTATGTCGGTGTGTGTACGGTATTAATCTGCTTCGCTCATAAGTAAAAAACGGCACCTGCTGCCG‑TTTTTTTGTCTTAAACAATCACTTATCTTTCTTCAGCGCCTCTAGCGTTGGCGTTTCGTCaaa < 2:77694/139‑1 (MQ=255) aCGGTTGGTGTGAAACTAAGTCGGGGTGTGTACGGTATTAATCTCGTTCGCTCATAAGTAAAAAACGGCCCCTGGTGCCG‑TTTCTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCaaa < 2:481712/143‑1 (MQ=255) ggTTGGTGTGAAACTAAGTCGGAGTGTGTACGGTATTAATCTGGTTCGCACATAAGTAAAAAACGGCACCTGGTGCCG‑TTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAaagc > 2:584158/1‑142 (MQ=255) tGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCG‑TTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGt < 2:721529/143‑1 (MQ=255) tGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCG‑TTTTTTTGTCTGAAACAATCACTTACCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGt > 1:149127/1‑143 (MQ=255) tgtgAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCG‑TTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGTTcc > 1:379640/1‑143 (MQ=255) tgtgAAACTAAGTCGGTGTGCGTGCTGCGTTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCG‑TTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCCAAGACGTTcc > 2:538953/1‑143 (MQ=255) gtgAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCG‑TTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGTTCCa > 1:562644/1‑143 (MQ=255) tgAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCG‑TTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCCAAGAAGTTCCAt > 2:838282/1‑143 (MQ=255) tgAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCG‑TTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGTTCCAt > 2:790046/1‑143 (MQ=255) tgAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCG‑TTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGCCGTTTCGTCAAAGAAGTTCCAt > 2:231879/1‑143 (MQ=255) tgAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTGCGCTCATAAGTAAAAAACGGCACCTGGTGCCG‑TTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGTTCCAt < 2:690437/143‑1 (MQ=255) tgAAACTAAGTCGGTGTGTGTACGGAATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCG‑GTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGTTCCAt > 1:534085/1‑143 (MQ=255) aCTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCG‑TTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGTTCCATGGtt > 2:475094/1‑143 (MQ=255) cTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCG‑TTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAACGAAGTTCCATGGttt > 1:137410/1‑143 (MQ=255) aGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCG‑TTTTTTTTTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTGTCGTCAAAGAAGTTCGCTGGTTTcag > 1:795006/1‑143 (MQ=255) tCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCG‑TTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGTTCCATGGTTTcagca < 1:797184/143‑1 (MQ=255) tCGGTGCCTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCG‑TTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGTTCCATGGTTTcagca < 2:565640/143‑1 (MQ=255) gtgtgtgtACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCG‑TTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGTTCCATGGTTTCAGCagag > 1:754250/1‑143 (MQ=255) tgtgtgtACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCG‑TTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAACGAAGTTCCATGGGTTACGCagagg > 1:479265/1‑142 (MQ=255) tACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCG‑TTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGTTCCATGGTTTCAGCAGAGTATGTag > 1:275291/1‑142 (MQ=255) tACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCG‑TTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGTTCCATGGTTTCAGCAGAGCATGTAc > 1:468931/1‑143 (MQ=255) ggTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCG‑TTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGTTCCATGGTTTCAGCAGAGTATGTACCCa > 2:22832/1‑143 (MQ=255) ggTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGACG‑TTTTTTTGTATGAAACAATCACTTATCTTTCTTCAGCGCACCTAGCGTTGGCGTTTCGACAAAGAAGTTGCAAGGTAACAGAAGAGTATGTaacaa > 2:655896/1‑139 (MQ=255) tgttAATCTGGTTCTCTCATAGCTAATGAACGGCACCTGGTGCCG‑TTTTTTTGTCTGACACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGTTCCATGGTTTCAGCAGAGTATGTACCCAtt < 2:812704/141‑1 (MQ=255) tATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGACG‑TTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCACCTAGCGTTGACGTTTCGACAAAGACGATGCATGATTACAGCAGATTCTGTACCCAta > 2:215280/1‑142 (MQ=255) aTTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCG‑TTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGTTCCATGGTTTCAGCAGAGTATGTACCCATtc < 1:22249/143‑1 (MQ=255) aTTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCG‑TTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGTTCCATGGTTTCAGCAGAGTATGTACCCATtc > 2:784034/1‑143 (MQ=255) tttGGTTCGCGCATAAGTAAAAAACGGCACCTGGTGCCG‑TTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGTTCCATGGTTTCAGCAGAGTATGTACCCATtcggtcg < 1:507776/141‑1 (MQ=255) tCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCG‑TTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGTTCCATGGTTTCAGCAGAGTATGTACCCATtcggtcg > 1:226481/1‑143 (MQ=255) tCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCG‑TTTGTTTGTCTGAAAAAATCAGTGATGTTTCGTCAGCGCCCCTGGCGTTGGCGTTTCGTAAAAGAAGTTCGAGGGTTTGAGCAGAGGAGGTACCAGTgcggtcg > 2:116379/1‑143 (MQ=255) tCTGGTGCGCTCATAAGTAAAAAACAGCACCTGGTGCCG‑TTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGTTCCATGGTTTCAGCAGAGTATGTACCCATtcggtcg < 1:231723/143‑1 (MQ=255) gTTCGCTCATAAGTAAAAACCGGCACCTGGTTCCG‑TTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCTTTGGCGTTTCGTCAAAGAAGTTCCATGGTTTCAGCAGAGTATGTACCCATTCGGTCGGCAt < 2:542830/143‑1 (MQ=255) gTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCG‑TTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGTTCCATGGTTTCAGCAGAGTATGTACCCATTCGGTCGGCAt < 2:60822/143‑1 (MQ=255) tCATAAGTAAAAAACGGCACCTGGTGCCG‑TTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGTTCCATGGTTTCAGCAGAGTATGTACCCATTCGGTCGGCATAATCgg > 2:188314/1‑143 (MQ=255) cATAAGTAAAAAACGGCACCTGGTGCCG‑TTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGTTCCATGGTTTCAGCAGAGTATGTACCCATTCGGTCGGCATAATCGGc < 1:477539/143‑1 (MQ=255) aTAAGTAAAAAACGGCACCTGGTGCCG‑TATTTTTGTCTGAAACAATCACTTAGCCATCTTCAGCGCCACTAGCGAGAGCGTTTCGTACAAGAAGTGCAATGATTACCGCAGAGAGTGTGCCCGATCGATGGGCATCATCgtac > 2:606852/1‑140 (MQ=255) tAAGTAAAAAACGGCACCTGGTGCCG‑TTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGTTACATGGTTTCAGCAGAGTATGTACCCATTCGGTCGGCATCATCGGCCa > 2:453201/1‑143 (MQ=255) gTAAAAAACGGCACCTGGTGCCG‑TTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGTTCCATGGCTTCAGCAGAGTATGTACCCATTCGGTCGGCATAATCGGCCActc > 1:527953/1‑143 (MQ=255) tAAAAACCGGCCCCTCGTGCCG‑TTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGTTCCATGGTTTCAGCAGAGTATGTACCCATTCGGTCGGCATAATCGGCCActct < 2:605877/143‑1 (MQ=255) tAAAAAACGGCACCTGGTGCCG‑TTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCACAGAATTTCCATGGTTTCAGCAGAGTATGTACCCATTCGGGCGGCATAATCGGCCActct > 1:502400/1‑143 (MQ=255) tAAAAAACGGCACCTGGTGCCG‑TTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGTTCCATGGATTCAGCAGAGTATGTACCCATTCGGTCGGCTTAATCGGCCActct > 2:607485/1‑143 (MQ=255) aaaaaaaCGGCACCAGGTGCCGTTTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGTTCCATGGTTTCAGCAGAGTATGTACCCATTCGGTCGGCCTAATCGGGCActc > 2:154917/2‑143 (MQ=255) aacagaCGGCACCTGGTGGCG‑TTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCGCCTAGCGTTGGCGGTTCGTCAAAGAAGTTCCATGGTTTCAGCAGAGTATGTACCCATTCGGTCGGCATAATCGGCCACTCtt < 2:720941/138‑1 (MQ=255) aaaaaCGGCACCTGGTGCCG‑TTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTAACGTTTCGTCAAAGAAGTTCCCTGGTGTCAGCAGAGTATGTACCGATTCGGTCGGCCTAATCAGACACGCTTc > 2:704523/1‑143 (MQ=255) aaaaCGGCACCAGGTGCCG‑TTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGTTCCATGGTTTCAGCAGAGTATGTACCCATTCGGTCGGCATAATCGGCCACTCTTCg > 1:273103/1‑143 (MQ=255) aaCGGCACCAGGTGCCG‑TTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGTTCCATGGTTTCAGCAGAGTATGTACCCATTCGGTCCGCATAATCGGCCCCTCTTCgtc > 1:593205/1‑141 (MQ=255) aCGGCACCTGGTGCCG‑TTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGTTCCATGGTTTCAGCAGAGTATGTACCCATTCGGTCGGCATAATCGGCCACTCTTCGgcg > 1:632575/1‑143 (MQ=255) cGGCACCTGGTGCCG‑TTTTTTTGTCTGAAACAATCACTTCTCTTTCTCCAGCGCCCCTAGGATTGGAGGGTTGTCAGAGCAGTCCCCCGGCTTCAGCAGAGTATGTACCCATTCGGTCGGCATAATCGGCAACTCCTCGgcgc > 2:820395/1‑143 (MQ=255) cGGCACCTGGTGCCG‑TTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGTTCCATGGTTTCAGCAGAGTATGTACCCATTCGGTCGGCATAATCTGCCACTCCTCGgcgc > 2:206200/1‑143 (MQ=255) cGGCACCTGGCGCCG‑TTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGTTCCATGGTTTCAGCAGAGTATGTACCCATTCGGTCGGCATAATCGGCCACTCTTCGgcgc < 1:184102/143‑1 (MQ=255) gCACCTGGTGCCG‑TTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGTTCCATGGTTTCAGCAGAGTATGTACCCATTCGGTCGGCATAATCGGCCACTCTTCGGCGCgg < 1:787221/143‑1 (MQ=255) aCCTGGTGCCG‑TTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGTTCCATGGTTTCAGCAGAGTATGTACCCATTCGGTCGGCATAATCGGCCACTCTTCGGCGCGGGc < 1:278374/143‑1 (MQ=255) | ACGCTAACTTACCGTTTGGTGGGATGAAGCAGTCAGGAACGGGCCGTGATTTTGGCCCCGACTGGCTGGACGGTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCG‑TTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGTTCCATGGTTTCAGCAGAGTATGTACCCATTCGGTCGGCATAATCGGCCACTCTTCGGCGCGGGC > NC_000913/1448909‑1449189 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |