| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,416,622 | C→G | 100% | Q626E (CAG→GAG) | pta → | phosphate acetyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,416,622 | 0 | C | G | 100.0% | 87.4 / NA | 34 | Q626E (CAG→GAG) | pta | phosphate acetyltransferase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base G (17/17); total (17/17) | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
TATCGAACCGCGCGTTGCTATGCTCTCCTACTCCACCGGTACTTCTGGTGCAGGTAGCGACGTAGAAAAAGTTCGCGAAGCAACTCGTCTGGCGCAGGAAAAACGTCCTGACCTGATGATCGACGGTCCGCTGCAGTACGACGCTGCGGTAATGGCTGACGTTGCGAAATCCAAAGCGCCGAACTCTCCGGTTGCAGGTCGCGCTACCGTGTTCATCTTCCCGGATCTGAACACCGGTAACACCACCTACAAAGCGGTACAGCGTTCTGCC > NC_000913/2416489‑2416759 | tATCGAACCGCGCGTTGCTATGCTCTCCTACTCCACCGGTACTTCTGGTGCAGGTAGCGACGTAGAAAAAGTTCGCGAAGCAACTCGTCTGGCGCAGGAAAAACGTCCTGACCTGATGATCGACGGTCCGCTGGAGTacgacg > 1:409865/1‑143 (MQ=255) ccGCGCGTTGCTATGCTCTCCTACTCCACCGGTACTTCTGGTGCAGGTAGCGACGTAGAAAAAGTTCGCGAAGCAACTCGTCTGGCGCAGGAAAAACGTCCTGACCTGATGATCGACGGTCCGCTGGCGTACGACGCTGCGGt > 1:127340/1‑143 (MQ=255) tGCTCTCCTACTCCACCGGTACTTCTGGTGCAGGTAGCGACGTAGAAAAAGTTCGCGAAGCAACTCGTCTGGCGCAGCAAAAAACCACAATGCTGATGATCGACGGCCCGCTGGAGCACGACGCTGCGGTCATGGCCGACgct > 1:405631/1‑141 (MQ=255) gCTGTCCCACTCCAGCGGTACTGCTGGGGCAGGTAGCGACGTAGAAACAGTTCGCGACGCAACTCGTCGGGCGCAGGAAAGACGTCCTGACCTGATGATCGACGGTCCGCTGGAGTACGACGCTGCGGTAATGGCTGACGTTg < 2:264175/143‑1 (MQ=255) cTACTCCACCGGTACTTCTGGTGCAGGTAGCGACGTAGAAAAAGTTCGCGAGGCAACTCGTCTGGCGCAGGAAAAACGTCCTGACCTGATGATCGACGGTCCGCTGGCGTACGACGCTGCGGTAATGGCTGACGTTGCGaaag > 1:524284/1‑142 (MQ=255) aCCGGTACTTCTGGTGCAGGTAGCGACGTAGAAAAAGTTCGCGAAGCAACTCGTCTGGCGCAGGCAAAACGTCCTGACCTGATGATCGACGGTCCGCTGGAGCACGACGCTGCGGTAATGGCTGACGTTGCGAACTCCACAgc > 1:271377/1‑143 (MQ=255) aCCGGTACTTCGGGTGCAGGTAGCGACGTAGAAAAAGTTCGCGAAGCAACTCGTCTGGCGCAGGAAAAACGTCCTGACCTGATGATCGACGGTCCGCTGGAGTACGACGCTGCGGTAATGGCTGACGTTGCGAAATCCAAAgc < 1:480919/143‑1 (MQ=255) cTGGTGCAGGTAGCGACGTAGAAAAAGTTCGCGAAGCAACTCGTCTGGCGCAGGAAAAACGTCCTGACCTGATGATCGACGGTCCGCTGGAGTACGACGCTGCGGTAATGGCTGACGTTGCGAAATCCAAAGCGCCGAActct > 1:308524/1‑143 (MQ=255) tAGCGACCGAGAGAGAGTCCGCGAAGCAACGCGTCTGGCGCAGGAAAAACGTCCTGACCTGGTGATCGACGGTCCGCTGGAGTACGACGCTGCGGTAAGGGCTGACGTTGCGAAATCCAAAGCGCCGAACTCTCCGGTTGCAg < 1:15609/143‑1 (MQ=255) agcaccGTAGAAAAAGCTCGCGATGCAACTCGTCTGGCTCAGGAAAAACGTCCTGACCTGATGATCGACAGCCCGCTGGAGTACGACGCTGCGGTAATGGCTGACGTTGCGAAATCCAAAGCGCCGAACTCTCCGGTTGCAgg < 2:59166/138‑1 (MQ=255) aGCGACGTAGAAAAAGTTCGCGAAGCAACTCGTCTGGCGCAGGAAAAACGTCCTGACCTGGTGATCGACGGTCCGCTGGAGTACGACGCTGCGGTAATGGCTGACGTTGCGAAATCCAAAGCGCCGAACTCTCCGGTTGCAgg > 1:125576/1‑143 (MQ=255) aGCGACCTATCAGAAGTTCGCGATGCCCCTCGGCTGGGGCAGGATAGACGTCCTGACCTGGTGATACACGGTCTGCTGGAGTACGACGCTGCGGTAATGGCTGACGTTGCGAAATCCAAAGCGCCGAACTCTCCGGTTGCAgg < 2:59040/143‑1 (MQ=255) gACGTAGAAAAAGTTCGCGAAGCAACTCGTCTGGCGCAGGAAAAACGTGCTGACCTGATGATCGACGGTCCGCTGGAGTACGACGCTGCGGTAATGGCTGACGTTGCGACATCCAAAGCGCCGAACTCTCCGGTTGCAGGTcg > 1:177654/1‑143 (MQ=255) aGAAAAAGTTCGCGAAGCAACTCGTCTGGCGCAGGAAAAACGTCCTGACCTGATGATCGACGGTCCGCTGGAGTACGACGCTGCGGTAATGGCTGACGTTGCGAAATCCAAAGCGCCGAACTCTCCGGTTGCAGGTCGCGCTa > 1:353943/1‑143 (MQ=255) ggTTCGCGAAGCAACTCGCCTGGCGCAGGAAAAACGTCCTGACCTGATGATCGACGGTCCGCTGGAGTACGACGCTGCGGTAATGGCTGACGTTGCGAAATCCAAAGCGCCGAACTCTCCGGTTGCAGGTCGCGCTACCgtgt < 1:794313/142‑1 (MQ=255) gTTCGCGAAGCAACTCGTCTGGCGCAGGAAAAACGTCCTGACCTGATCATCGACGGTCCGCTGGAGTACGACGCTGCGGTAATGGCTGACGTTGCGAAATCCAAAGCGCCGAACTCTCCGGTTGCAGGTCGCGCTACCGTGtt > 1:389817/1‑143 (MQ=255) ttCGCGAAGCAACTCTTCTGGCGCAGGAAAAACGTCCTGACCTGATGATCGACGGTCCGCTGGAGTACGACGCTGCGGTAATGGCTGACGTTGCGAAATCCAAAGCGCCGAACTCTCCGGTTGCAGGTCGCGCTACCGTGTTc < 1:152878/143‑1 (MQ=255) cccccgAAGCAACTCGCCTGGCGCACGCATATCGTCCGGCTCTTATGCTCGACGGTCCGCTGGAGTACGACCCTGCGGTAATCGCTGACGTTGCGAAATCCAAAGCGCCGAACTCTCCGGTTGCAGGTCGCGCTACCGTGTTc < 2:223289/139‑1 (MQ=255) cgAATCAACTCGTCTGGCGCAGGAAAAACGTCCTGACCTGATGATCGACGGTCCGCTGGAGTACGACGCTGCGGTAATGGCTGACGTTGCGAAATCCAAAGCGCCGAACTCTCCGGTTGCAGGTCGCGCTACCGTGTTCATCt < 1:305018/143‑1 (MQ=255) gAAGCAACTCGTCTGGCGCAGGAAAAACGGCCTGACCTGATGATCGACGGGCCGCTGGAGTACGACGCTGCGGTAATGGCTGACGTTGCGAAATCCAAAGCCCCGAACTCTCCGGTCGCAGGTCCCGCTACCGTGTTCATCtt > 1:855350/1‑143 (MQ=255) gCAACTGGTCTGGGGCAGGAAAAACGTCCTGACCTGATGACCGACGGTCCGCTGGAGTACGACGCTGCGGTAATGGCTGACGTTGCGAAATCCAAAGCGCCGAACTCTCCGGTTGCAGGTCGCGCTACCGTGTTCATCTTccc < 1:328597/143‑1 (MQ=255) agcgcGTCTGGCGCAGGAATCTCGTCCTGACCTGATGATCGACGGTCCGCTGGAGTACGACGCTGCGGTAATGGCTGACGTTGCGAAATCCAAAGCGCCGAACTCTCCGGTTGCAGGTCGCGCTACCGTGTTCATCTTCCCgg < 2:659850/139‑1 (MQ=255) aaCTCGTCTGGCGCAGGAAAAACGTCCTGACCTGATGATCGACGGTCCGCTGGAGTACGACGCTGCGGTAATGGCTGACGTTGCGCAATCCAAAGCGCCGAACTCTCCCGTTGCAGGTCGCGCTACCGTGTCCAGCTTcccac > 2:128660/1‑141 (MQ=255) gcgcAGGAAAACCGTCCTGACCTGATGGTCGACGGTCGGCTGGAGTACGCCGCTGCGGTAATGGCTGACGTTGCGAAATCCAAAGCGCCGAACTCTCCGGTTGCAGGTCGCGCTACCGTGTTCATCTTCCCGGATCTGAacac < 2:509268/143‑1 (MQ=255) gcAGGAAAAACGTCCTGACCTGATGATCGACGGTCCGCTGGAGTACGACGCTGCGGTAATGGCTGACGTTGCGAAATCCAAAGCGCCGCACTCTCCGGCTGCAGGTCGCGCTACCGTGTTCATCTTCCCGGATCTGCACGCCg > 1:302806/1‑143 (MQ=255) aGGAAAAACGTCCTGACCTGATGATCGACGGTCCGCTGGAGTACGACGCTGCGGTAATGGCTGACGTTGCGAAATCCCAAGCGCCGAACTCTCCGGTTGCAGGTCGCGCTACCGTGTTCATCTTCCCGGATCTGAACACCGGt < 2:868943/143‑1 (MQ=255) ggAAAAACGTCCTGACCTGATGATCGACGGTCGGGTCGAGCACGACGCGGCGGTAATGGCTGACGTTGCGAAATCCAAAGCGCCGAACTCTCCGGTTGCAGGTCGCGCTACCGTGTTCATCTTCCCGGATCTGAACACCGGTa < 2:180594/143‑1 (MQ=255) gAAAAACGTCCTGACCTGATGATCGACGGTCCGCTGGAGTACGACGCTGCGGTAATGGCTGACGTTGCGAAATCCAAAGCGCCGAACTCTCCGGTTGCAGGTCGCGCTACCGTGTTCATCTTCCCGGATCTGAACACCGGTaa > 1:143959/1‑143 (MQ=255) aaaaCGTCCTGACCGGATGATCCACGGTCCGCTAGAGAGCGAGGTTGCGGGGATGGCTGACGTTGCGAAATCCAAACCGCCGCACTCTCCGGGTGCAGGTCGCGCTACCGTGTTCATCTTCCCGGATCTGAACACCGGTAaca < 1:737715/143‑1 (MQ=255) aCGGCCTGACCGGATGATCGACGGTCCGCTGGAGTACGGCGCTGCGGTAATGGCTGACGTTGCGAAATCCAAAGCGCCGAACTCTCCGGTTGCAGGTCGCGCTACCGTGTTCATCTTCCCGGATCTGAACACCGGTAAcacca < 2:385041/143‑1 (MQ=255) tgatgaTCGACGGTCCGCTGGAGTACGACGCTGCGGTAATGGCTGACGTTGCGAAATCCAAAGCGCCGAACTCTCCGGTTGCAGGTCGCGCTACCGTGTTCATCTTCCCGGATCTGCACACCGGTAACACCACCTACAAAGCg > 1:207503/1‑143 (MQ=255) gtatCGACGGTCCGCTGGAGTACGACGCTGCGGTAATGGCTGACGTTGCGAAATCCAAAGCGCCGAACTCTCCGGTTGCAGGTCGCGCTACCGTGTTCATCTTCCCGGATCTGAACACCGGTAACACCACCTAAAAAGCGATa < 2:590593/141‑1 (MQ=255) atCGACGGTCCGCTGGAGTACGACGCTGCGGTAATGGCTGACGTTGCGAAATCCAAAGCGCCGAACTCTCCGGTTGCAGGTCGCGCTACCGTGTTCATCTTCCCGGATCTGAACACCGGTAACACCACCTACAAAGCGGTACa > 1:47406/1‑143 (MQ=255) cGCTGGAGTACGACGCTGCGGTAATGGCTGACGTTGCGAAATCCAAAGCGCCGAACTCTCCGGTTGCAGGTCGCGCTACCGTGTTCATCTTCCCGGATCTGAACACCGGTAACACCACCTACAAAGCGGTACAGCGTTCTGcc > 1:840475/1‑143 (MQ=255) | TATCGAACCGCGCGTTGCTATGCTCTCCTACTCCACCGGTACTTCTGGTGCAGGTAGCGACGTAGAAAAAGTTCGCGAAGCAACTCGTCTGGCGCAGGAAAAACGTCCTGACCTGATGATCGACGGTCCGCTGCAGTACGACGCTGCGGTAATGGCTGACGTTGCGAAATCCAAAGCGCCGAACTCTCCGGTTGCAGGTCGCGCTACCGTGTTCATCTTCCCGGATCTGAACACCGGTAACACCACCTACAAAGCGGTACAGCGTTCTGCC > NC_000913/2416489‑2416759 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |