| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,815,819 | C→G | 5.5% | intergenic (‑51/+44) | pyrE ← / ← rph | orotate phosphoribosyltransferase/truncated RNase PH |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,815,819 | 0 | C | G | 5.5% | 318.7 / 6.1 | 107 | intergenic (‑51/+44) | pyrE/rph | orotate phosphoribosyltransferase/truncated RNase PH |
| Reads supporting (aligned to +/- strand): ref base C (53/47); new base G (5/2); total (58/49) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.50e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.17e-01 | |||||||||||
Only 100 of 112 total aligned reads displayed.
TGCGCCCGGATTTCAGCGTAAACTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATG > NC_000913/3815681‑3815959 | tGCGCCCGGATGTCCGCGTAAACTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTc < 1:325413/143‑1 (MQ=255) gcgcCCGGATTTCAGCGTAAACTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCg < 1:482292/143‑1 (MQ=255) ctcctggATTTCATCGTAATTCTGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGc < 1:210940/138‑1 (MQ=255) cgcgcgGATTTGACCGTAACCTCGCCAACCTTAGACACCTGCTTGCTAAGCGGAGATCCAATACCCTGGCGCTGAGATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGc < 2:626205/143‑1 (MQ=255) gcCCGGATTTCAGCGTAAACTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAACTTCAATAAACTGGCGCTGATATGGTTTCACGCCTTCGCTCCTCATCTTACTTTTCTACAAAC‑AAAACAAAGGCGACTCATCAgcagcc > 2:369025/1‑138 (MQ=255) ccGGATTTCAGCGTAAACTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTGATGAGTCGCCtt < 1:57863/143‑1 (MQ=255) ccGGATTTCAGCGTAAACTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCtt > 2:288777/1‑143 (MQ=255) ccGGATTTCAGCGTAAACTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAAGTCAATAAACTGGCGCTGATATGGTTTCATGCCTACGCTCCTCATCTTACTTTTATACAGGC‑AAAAAAAAGGCGACTAATGAGTGGCCtg > 2:326277/1‑142 (MQ=255) tttCAGCGTAAACTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTGATGAGTCGCCttttttt < 1:427380/143‑6 (MQ=255) cAGCGTAAACTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCa < 1:136294/143‑1 (MQ=255) aGCGTAAACTCGCCAAACTTTAACACCTGCATGCTAAGCGCAAATTCAATAAACTGGAGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGAGACCAATGCGTCGCCTTAAAGAtacg > 2:515390/1‑140 (MQ=255) gaaaaCTCGGCAAACTCTAACGCCTGCTTGCTAAGCGCAAATTCTATAATCTGGCGCTGATATGGTTTCATGCCTTGGCTCCTCATCTTATTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGttt < 1:157556/141‑1 (MQ=255) gTAAACTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGttt < 1:720436/143‑1 (MQ=255) aCTCTCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTTCTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCa < 1:391878/143‑1 (MQ=255) aCTCGCCAAACTTTAACAGCTGCTTGCTAAGCGCAAACTCAATAGACTGGCGCTGACATGGTTTCATGCCTTCGCACCTCATATTACTTTTCTACAGAC‑AAAAAAAAGGCGACCCATCAGTCTCCTTAAAAATCAGTTTGCCa < 2:460038/143‑1 (MQ=255) aCTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AACAAAAAGGCGACTCATCAGTCGCCTTAAACATCAGCTTGCCa > 2:39900/1‑143 (MQ=255) gCCAAACTTTACCACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAgcgc < 1:669691/143‑1 (MQ=255) gCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGCTATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTATACAGAC‑AAAAAAAAGGCAAATCATCAGTCGCCTTAAAAATCAATTTgaccaccg > 2:670623/1‑136 (MQ=255) ccAAACTTTAACCCCTGCTTGCTAAGCGCAAATCCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCCCCTCATCTTCCTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCC < 1:810838‑M1/143‑1 (MQ=255) cAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCG > 2:246553‑M1/1‑143 (MQ=255) cTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATATTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTATAAATCAGTTTGTAAGCGCCGCCgt > 1:154070‑M1/1‑141 (MQ=255) tttAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCACATCTTACTTTTCTACAGAC‑AAAGAAAA‑GCGCCGAATCAGTCGCCTCAAAAACCACCTTAACAACGCCCCCTTCt > 2:421332/1‑143 (MQ=255) cacCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcg > 1:660565‑M1/1‑141 (MQ=255) ccTGTTTGCTAAGCGCAAATGCAATAATCTGGCGCTGAAATGGTCGCATGCCTTCGCTCCTCATCTTACTTGTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtc < 1:134841‑M1/143‑5 (MQ=255) ccTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtc < 2:767849‑M1/143‑5 (MQ=255) cTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGACTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCgcgcc > 2:814384/1‑139 (MQ=255) gcttgctAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTACcgtcccc > 1:871758‑M1/1‑136 (MQ=255) ctAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcac < 2:494403‑M1/143‑13 (MQ=255) aaGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACCCATCAGTCGCCTTCAAAATCAGTTGGCCAGCGCCGCGTTGTCCcgccccctgcccgt > 2:804091‑M1/1‑129 (MQ=255) cgcAAATTCAATAAACTGGGGGTGATATGGTTTCATGCCTGCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCGTCAGTCGCCTGAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaa < 2:583522‑M1/143‑18 (MQ=255) cgcAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCGCATCTTACTTCTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaa < 1:222259‑M1/143‑18 (MQ=255) cgcAAACACAAACAACTGCCGCTGATACGACTTCATACCTTCGCTCCACATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAACCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaa < 1:104422‑M1/143‑18 (MQ=255) gcAAATTCATTAATCTGGCGCTGATATGGTTTCATGTCTTCGTTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaat < 1:766302‑M1/143‑19 (MQ=255) gcAAATTCAATAAACTGGCGCTGATATGGTTTCATGTCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTGAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcttcccctgcacttcaat > 1:44161‑M1/1‑125 (MQ=255) gcAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaat > 2:366384‑M1/1‑125 (MQ=255) gcAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaat < 1:781109‑M1/143‑19 (MQ=255) cAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCCCAACAACGTGCATTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatg < 1:644233‑M1/143‑20 (MQ=255) aaaTTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAACAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatga > 1:185250‑M1/1‑123 (MQ=255) aaaTTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑‑AAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgat < 1:866389‑M1/143‑22 (MQ=255) aaTTCAATACCCTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgat < 1:202627‑M1/143‑22 (MQ=255) aaTTCAACAAACCGGGTCTGATCTGGTTTCATGCCTTCGCTCCTCATCTTCCTTTTCTACACAC‑AAAAAAACGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttccatgat < 2:736360‑M1/143‑22 (MQ=255) ttCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAACAAGGCGACTCATGAGTCGCCTTAAAAATCAATTTGCCAGCGCCACCTTCTGCcgtcccctgcacttcaacaatgc > 2:321032‑M1/1‑120 (MQ=255) ttCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTCAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgccccctgcacctccatgatgc > 1:117716‑M1/1‑120 (MQ=255) tCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcg > 1:595856‑M1/1‑119 (MQ=255) aaTAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcctcccccccacttcaatgatcctct > 1:398804‑M1/1‑117 (MQ=255) aTAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgccc > 1:57448‑M1/1‑116 (MQ=255) aTAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCCCCTTCTGCcgtccactccacttcaatcatgcgccc > 1:498045‑M1/1‑116 (MQ=255) aTAAACTGGCGCTGATATGGCTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttccatgatgcgccc > 2:460423‑M1/1‑116 (MQ=255) tAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccg > 1:668157‑M1/1‑115 (MQ=255) aaaCTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGCTTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgt > 1:218011‑M1/1‑114 (MQ=255) tgcgctGATATGGCTTCATGCCTTCGCTCCTCATCCTACTGTTCTCCAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcg < 1:348570‑M1/142‑35 (MQ=255) gcgcTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCCACAGACAAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcg < 1:246651‑M1/143‑35 (MQ=255) gcgcTGATATGGTTTCATGCCTTCGCTCCTAAACTAACAAATCTACAGAC‑AAAATAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCACGCGCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcgg > 1:791390‑M1/1‑108 (MQ=255) cTGATATGGGTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtca < 1:278609‑M1/143‑39 (MQ=255) gcatatggTTTCATGCCGTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcat < 2:52974‑M1/141‑40 (MQ=255) tGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACACAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcacta < 1:600089‑M1/143‑45 (MQ=255) tGGTTTCATGCCTTCGCTCCTCATCTTACTTATCAACAGAC‑AAAAAAAAGGCGACTCATCACTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatcatccgcccctcctccgccatcacca > 2:271991‑M1/1‑99 (MQ=255) ggTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactac > 1:436271‑M1/1‑98 (MQ=255) ggTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactac > 1:340292‑M1/1‑98 (MQ=255) ggTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccatgcacctcgagggtgcggccgtcttcggtcatcactgc > 1:686286‑M1/1‑98 (MQ=255) gTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacg > 1:741816‑M1/1‑97 (MQ=255) tttCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgt > 2:450065‑M1/1‑96 (MQ=255) aTGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcccttccatgatgcgcccgtcttcggtcatcaatacgatcat > 1:21033‑M1/1‑92 (MQ=255) tGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAGAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcacctgcccttcaatcatgcgcccgtattcggtcagcgctacgttctgg > 2:414902‑M1/1‑91 (MQ=255) tGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgattctcccatctacagtcatcactacgttcatg > 1:513889‑M1/1‑91 (MQ=255) gCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgt < 1:464512‑M1/143‑54 (MQ=255) cTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcg > 1:809790‑M1/1‑88 (MQ=255) cTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgtccatctcg > 1:332843‑M1/1‑88 (MQ=255) tCGCTCCTCATCTTACTTTTCTACAGAC‑AGAACAAAGGCACCTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggt < 2:422396‑M1/143‑58 (MQ=255) ggcTCCTCATCTTACTGTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtc < 2:730100‑M1/142‑59 (MQ=255) gctcaTCTTGCTGTTGTACAGAC‑ACACTAAAGGCGACTCATCAGTCGCCTTAAACCTCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcatggatgcgcccgtcttcggtcatcactacgttcatgtcggtctctg < 2:367266‑M1/142‑63 (MQ=255) cctcATCTTGCTTTTCTGAGCAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAACATCAGTTTGCCAGCGCCGCCGTCTGCcgtcccctgcacttcaatgatgcgctcgtcctcggtcctcactacgttcatgtcggtctctg < 1:890127‑M1/143‑63 (MQ=255) cctcATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctg > 2:680427‑M1/1‑81 (MQ=255) ctcATCGTAATGTTCTACGAAC‑AAACAAAAGGCGACTCATCCGTCGCGTTAAAAATCAGTTTGCCAGCGGCGCCGTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgc < 2:840361‑M1/143‑64 (MQ=255) cgtctTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcgg < 2:252801‑M1/141‑66 (MQ=255) tCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTGCCGTGCAGCTTGCGGGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggca < 2:185250‑M1/143‑68 (MQ=255) tCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCCCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggca < 1:188222‑M1/143‑68 (MQ=255) aCTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtccctgcggccgcgt > 2:213912‑M1/1‑72 (MQ=255) tttCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtctt > 2:504065‑M1/1‑69 (MQ=255) tACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaac < 1:591593‑M1/143‑79 (MQ=255) tACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcacctgcacttcaatgatgcgcccgacttcggtcatcactacgttcatgtcggtctctgcggcagcgtcttcaaa > 1:448977‑M1/1‑65 (MQ=255) aCAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatccctacgttcatgtcggtctatgcggcagagtcttcaacg > 2:228550‑M1/1‑64 (MQ=255) cAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTACAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgctgcgcccgtcttcggtcatcactacgttcatgtcggtctatgcggcagcgccttcaaagc > 2:724003‑M1/1‑63 (MQ=255) cAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgt > 2:840790‑M1/1‑63 (MQ=255) aGAC‑AAAAAACAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgta < 1:83540‑M1/143‑82 (MQ=255) aC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgctcatgtcggtctctccggcagagccttcaacgcacg > 1:53023‑M1/1‑60 (MQ=255) c‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCAGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcagcgctacggtcctgtcggtctctgcagcagaggcttccacgtcttc > 1:325568‑M1/1‑59 (MQ=255) aagaaaaggcGTCTCATCAGTCGCCTTAATAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattcca < 2:606515‑M1/140‑87 (MQ=255) aaaaaGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGAGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatttcggtctctgcggcagagtcttaaacgaattgcaga > 2:215471‑M1/1‑55 (MQ=255) aaaaaGGCGACTCATCAGTCGCCTTAAAAACCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagccttcaacgtattcgaga > 1:890587‑M1/1‑55 (MQ=255) aaaaaGGCGACGCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccaga < 1:150889‑M1/143‑89 (MQ=255) aaaaaGGCCACTCACCAGTCTCGCGAAAAATCAGTTTGCCAGCGCCGCCGTCTGCcgtcccctgcacttcaatgatgcgcccgtcttctgtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccaga < 2:649680‑M1/143‑89 (MQ=255) aaGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcacgtcggtctctgcggcagagtcttcaacgtattccagatcg < 1:148239‑M1/143‑92 (MQ=255) ggCGACTGATGAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttccacgtattccagaacgca > 2:238532‑M1/1‑50 (MQ=255) gCGACTGATGAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacgtcaatgatgcgcccgtcttcggtcatgactacgcgcatgtcggtcgcggcggcggagtctacgacgtattccagacaggaa > 2:649514‑M1/1‑49 (MQ=255) cTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccg < 1:166572‑M1/143‑99 (MQ=255) tcatcaGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgc > 1:59668‑M1/1‑44 (MQ=255) tcatcaGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgccgtcggtcatcactacgctcatgtcggtctctgcggcacggtcttcaacgtatcccagatcgccagccac > 2:656091‑M1/1‑44 (MQ=255) atcaGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcagacaggtt > 1:191844‑M1/1‑42 (MQ=255) atcaGTCGCCTTAAAAATCAGTTTGACAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgtgaatgtcgggcgctgcggcggggttctccacgtgttcaagatcgcaaaccgctt > 1:245440‑M1/1‑42 (MQ=255) | TGCGCCCGGATTTCAGCGTAAACTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATG > NC_000913/3815681‑3815959 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |