| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,917,405 | A→T | 18.6% | V287V (GTT→GTA) | atpG ← | ATP synthase F1 complex subunit gamma |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,917,405 | 0 | A | T | 18.6% | 152.7 / 7.8 | 76 | V287V (GTT→GTA) | atpG | ATP synthase F1 complex subunit gamma |
| Reads supporting (aligned to +/- strand): ref base A (34/25); new base T (2/13); total (37/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.04e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.92e-01 | |||||||||||
GCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCGCCATTGTCGGTCGCGGCTTTCATCGCCACCATACGGGCGGCCT > NC_000913/3917264‑3917547 | gCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTaaa < 1:420897/143‑1 (MQ=255) tCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTGAAcc > 1:576846/1‑143 (MQ=255) cATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTCAAATCCTCTACGAACTAACCTGTTTAAACcg > 2:876971/1‑143 (MQ=255) aTTACCCTTTTGCACCTCAAGAGCAACGTACACGCGCGGTACGGCATCCTGACGGAACTCGCCGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTCGCCATCTTCACTCCTCCACGCACTAACCTGCTCAAAccac > 2:642879/1‑141 (MQ=255) ttACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTACCAGTAGCCATCTTAAATGCTCTACGAAATAACCTGTTTAAACggcg > 1:348256/1‑143 (MQ=255) tagccttttGCACCTCAAGAGCATCGTACACGCGCGGTACGGGATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCgcgg < 2:131336/138‑1 (MQ=255) tACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCgcgg < 1:359649/143‑1 (MQ=255) tACCATTGTGCACCTCAAGAGCATCGGACACGCGCGGTCCGGCTGCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTGAAATCCTCTACGAAATAACCTGTTTAAACCgcgg < 2:261802/143‑1 (MQ=255) catcgcgCACCTCAAGAGCATCGGACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGcggcgg < 2:814197/137‑1 (MQ=255) cATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCCGTAGCCATCTTCAATCCTCTCCGCAAGAACCTGCTTACACCgcggcgc > 2:573810/1‑142 (MQ=255) aCCTCAAGATCAACGTACACGCGCGATACGGCATCCTGAGGGAATTCGGCGTCAACTCCGGCCCCGATTACCTCGACAAGCTATACAGTGGCCGTCGTGCACCCACTACGACCTAACCTGCTAGAACCGCCGCGCCCACCgac > 2:664407/1‑142 (MQ=255) tCAAGAGCATCGTACACGCGCGGTACCGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGACTACCTGGACACTCCTTCCCGTAGCCATCTCAAAACCACCACGAAATAACCCGCTTAAACCGGGGCCGGCCCCGAGACg > 2:712135/1‑143 (MQ=255) tCAAGAGCATCGTACACGCACGGTACGGAATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACAAAATGACCTGAATAAACCGCGTCAGCCCCCGAGAca > 2:75004/1‑142 (MQ=255) cgcgcgGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCt < 1:328059/143‑1 (MQ=255) cgcgGTATGGTTTCTTGTTGGATTTCTACCTCCACTACGTCGCCGATTACCTGTACAATATTTCCAGTAGCCAGCTTAAATCCTATACGAGTTTTTTTTTTAATGATACGGCGACCACCGAGACGATCTCGGTGAGTTCCTGa < 2:435329/143‑1 (MQ=255) cgcgGTACAGCGAGCTGAGGGAATACCACGTCGGCTACGGCGCCGACTAGCTGGATAATCTTTCCAGTAGCCATCTTAGACCCGCTACGAATTATCCTGTTAATGCTGCGGCGGCCACCGAGACGATCTCGGTGAGTTCCTGa < 2:856372/143‑1 (MQ=255) ggTACGGCATCCTGAGGGAATTCGGCGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTGAACTCCTCGACGAATTTTTTTTTTAATGCTGCGGCGGCCACCGAGACGATCTCGGTTAGTTCCTGAGTa < 2:872731/143‑1 (MQ=255) gTACCGCATGCTGAGGGAATTGGCCGTCCACTACGGCGCCTATTACCTTGACATTCGTTCCAGTAGACATCGTAAATCCTCTACGTATTATTTTTTTAATGCTACGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTaa < 2:480638/143‑1 (MQ=255) ggCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCt > 1:357492/1‑143 (MQ=255) ggCATCCCGAGGGAATGCGACGGCAACAGCGGCGCCGCTTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAAGAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCt < 1:544439/143‑1 (MQ=255) aTCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTTAGTAATGCTGGc < 1:203013/143‑1 (MQ=255) tgggggACTCCGTCGTCAACTACGGCGCCGACTCCCTGGACGTTCTCTCCCGTAGCCATCTTAAAGCCTCGACGACTTTTCCTGTTAATGCTGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGa < 2:862606/140‑1 (MQ=255) gAGGTAATTCGACGTCAACTACGGCGCCGATCACCGGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGAc < 1:80468/143‑1 (MQ=255) cgcgcaTTCGACGTCATGTTCGGCGCCGATTACCTGGACATTCTTTCCAGTAGCCATCTCACATCCGCTACTAATTTTTTTTTTAATGACACGGCGACCACCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACg < 2:657175/138‑1 (MQ=255) ggAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTGCCGGAGTAATGCTGGCCTGACGAg > 1:103956/1‑143 (MQ=255) ttCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGGGCttt > 1:329100/1‑143 (MQ=255) gACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTttgtt < 1:604527/143‑1 (MQ=255) gtgaaaCTGCGGGGCTGATTACCTGGACTTTCTTTCCAGTGGCCATCTGAAAGCCTCTACGATTTTTCCTTTTAATGATGCGGCGACCACCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTtgttgt < 2:582799/139‑1 (MQ=255) gTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGta < 1:428141/143‑1 (MQ=255) gTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGATCCTGAGTAATGCTGGCCTGACGCGCTTTGTTGta > 1:318290/1‑143 (MQ=255) gTCAACTACGGCGCCGATTACCTGGACAATCTTTACAGTAGCCATCTTAAATCCTCTGCGAGATAACCTGTTTATACCGCGGCGGGCCCCGAGACGATCCCGGTGGTTGCCGGCGTAATGCTGGCCTGCCCAGCTTtgtcgtg > 1:122469/1‑142 (MQ=255) tCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGCGTTCCTGAGTAATGCCGGCCTGACGAGCTTTGTTGtat > 1:820816/1‑143 (MQ=255) cAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGtata > 1:502451/1‑143 (MQ=255) cAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTCAAATCCTCTACGCAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGtata < 1:121063/143‑1 (MQ=255) aaCTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAACTAACCTGTTTAAACCGCGGCGGCCCCCGCGCCGACCTCGGTGAGTTACTGAGGAATGCTGGACTGACCAGCTTTGCTGTATAc > 1:347441/1‑143 (MQ=255) aaCTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGCAATGCTGGCATGACGAGCTTTGTTGTATAc > 2:787466/1‑143 (MQ=255) aCTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATACCCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATAcc < 1:13977/143‑1 (MQ=255) cTACGGCGCCGATTACCTGGACAATCTTTGCAGTAGGCATCTTAAATCCTCGACGAAATATTCTGTTAAAGCCGCGGCGGCCACCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCa < 2:567708/143‑1 (MQ=255) gctttgcCTATTACCTCTTCTATCTTTCTAGTATCTTTCTTAAATCCTCTACGCTATTTTTTTTTTATATTACTGCTGCCTCCGAGACTATCTCGGTGAGTTCCTGAGTAATGCTGGCCTTACGAGCTTTGTTGTATACCAAc < 2:756906/138‑1 (MQ=255) gcgcCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGc < 1:704859/143‑1 (MQ=255) cgcCGATTACCTGGACAATCTTGCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCCGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCa < 1:410231/143‑1 (MQ=255) tgATTATCTGGCCTGTCTTTCCAGTAGGCGTCTTAAACCCTCGACGAAATGTTCTGTTAAGGCTGCGGCGGCCACCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGct < 2:576822/142‑1 (MQ=255) cGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGACACAACCCGTTTTTTGTGCGGCGGCCGACGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGct > 1:841878/1‑143 (MQ=255) gATTACCTGGACAATCTTTCCAGTAACCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGACCTCCTGACTAAAGCTGGCCCGCCGGGCACTGCTGTCTACCCACTCCAGcac > 2:189913/1‑141 (MQ=255) aTTACCTGGACTATTTTTCCAGGAGCCATCTTCAATCCTCTACGATTTTTTTTTTTAATGATACGGCGACCACCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGctct < 2:167916/143‑1 (MQ=255) aTTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGCGTAATGCTGTCCTGGGGGGCTTTGTTGTATACCAACTGCAGctct > 1:687744/1‑143 (MQ=255) aCCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTa < 1:584878/143‑1 (MQ=255) ccTGGTCTATCTTTCCAGTAGCCATCTTAAATCCTCTACGAATTTTTTTTTTAATGCTGCGGCGGCCACCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTaa < 2:309853/143‑1 (MQ=255) cTGGACACTCTTTCCAGTAGCCATATTAAATCCTCTACGAAATAACCTGTTTAAACCGCTGCGACCCCCGAGACGATCTCGGCGGGCTCCCGAGGAAAGCAGCCGAGACGAGCTTGGTTGTCTCCCACCTGCAGctgctcgat > 2:866301/1‑136 (MQ=255) cTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGCCGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGGGCTTTGTTGTATACTAACTCCACCTCTTTAAt > 1:451117/1‑143 (MQ=255) cTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGATCTTTact > 1:324637/1‑141 (MQ=255) tGGACAATCGTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATc < 1:781023/143‑1 (MQ=255) gACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAg < 1:252599/143‑1 (MQ=255) aCAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAgg > 1:300005/1‑143 (MQ=255) gtCTTTCCGGTAGCCATCTGAGATCCCCGACGATATTTTTTGTTAATGCTACGGCGGCCACCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCTGGCTg < 2:737345/142‑1 (MQ=255) ccATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCGCCATTgtcgg > 1:236287/1‑143 (MQ=255) cATCTTAAATCCTCTACGAAATAACCTGATTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGCTTTCCTGAGTAATGCTGGCCTGCCGAGCTTTGTTGTATACCGACTGAATCGCTTTAAGCAGGCTCCCCCCATTgaccgc > 2:831982/1‑138 (MQ=255) aTCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAGTCGGGCTGCCGCCGTTgtcggtc > 1:696540/1‑143 (MQ=255) ttacacccTCTACGAAATACCCTGTTTAAGCCGCGGCGGCCCCCGACACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCGCCATTGTCGGTcgcg < 1:501387/137‑1 (MQ=255) aaaTCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCGCCATTGTCGGTCGCGGc > 2:152924/1‑143 (MQ=255) aaaTCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCACCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTGTACCAACGGCAGCTCTTTAATCAGGCTGCCGCCATTGTCGGTggcggc > 1:762966/1‑143 (MQ=255) aTCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTGATGCGGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTCACCAGGCTGCCGCCGTTGTCGGTCGCGGCtt > 1:146848/1‑143 (MQ=255) ctACGAAAGAGCCAGGTAAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCGCCATTGTCGGTCGCGGCTTTCATc < 1:246326/143‑1 (MQ=255) tACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGCGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCGCCATTGTCGGTCGCGGCTTTCATCg < 1:37084/143‑1 (MQ=255) tACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCGCCATTGTCGGTCGCGGCTTTCATCg > 1:216488/1‑143 (MQ=255) tACGAAATAACCTGTTTAAACCGCGGCGGCCACCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCGCCACTGGCGGTGGGGGCtttgaggc > 1:806649/1‑138 (MQ=255) tcGAAATATCCTGTTTAAACCGCGGCGGCCCACGAGACAATCTCGGTGAGTTCCTGAGTAATGCTGGCCCGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCGCCATTGTCGGTCGCGGCTTTCATCGc < 1:161448/142‑1 (MQ=255) ccgtaaTAACCTGTTCAACCCGCGGCGGCCCCCGAGACGATCTCGGTGCGTTGCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCGCCATTGTCGGTCGCGGCTTTCATCGc < 1:33070/139‑1 (MQ=255) aCGAAGTATCCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCGCCATTGTCGGTCGCGGCTTTCATCGc < 2:636292/143‑1 (MQ=255) cGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCGCCATTGTCGGTCGCGGCCTTCCTCGcc > 1:30677/1‑143 (MQ=255) gAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCGCCATTGTCGGTCGCGGCTTTCATCGcca < 1:145868/143‑1 (MQ=255) gAAATAACCTGTTTAAACCGCGGCGGACCCCGAGACGATCTCGGTGAGTTTCTGAGTAATGATAGCCTGACGCGCTTTGTTTTATAGCCACTGCAGCTATTTAACAAGGCTGACGCCATAGGCGAACGCGGATTTCATAGcaa > 2:550169/1‑141 (MQ=255) tttttttcTGTTTATGCCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCGCCATTGTCGGTCGCGGCTTTCATCGccac < 2:425697/136‑1 (MQ=255) tttatccTGTTTATGCCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCGCCATTGTCGGTCGCGGCTTTCATCGccacc < 2:193638/138‑1 (MQ=255) aaCCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCGCCATTGTCGGTCGCGGCTTTCATCGCCACCATa > 1:433148/1‑143 (MQ=255) ccTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGGATACCAACTGCAGCTCTTTAATCAGGCTGTCGCCATTGTCGGTCGCGGCTTTCATCGCCACCATACg > 1:777574/1‑143 (MQ=255) tttAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGATTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCGCCATTGTCGGTCGCGGCTTTCATCGCCACCATACGggcg > 1:865525/1‑143 (MQ=255) aaCCGCGGCGGCCCCCGAGACGATCACGGTGAGTTCCTGAGTAATGCTGGCGCGACGAGCTTTGTTGTATACCAACTGAAGCTCTTGAATCAGGCAGCGGCCGTTGTCGGTCGAGGCTGCCAAGGCCACCCTACggagagaca > 2:655893/1‑136 (MQ=255) | GCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCGCCATTGTCGGTCGCGGCTTTCATCGCCACCATACGGGCGGCCT > NC_000913/3917264‑3917547 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |