| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,060,264 | A→C | 6.3% | intergenic (+34/‑183) | bipA → / → yihL | ribosome‑dependent GTPase, ribosome assembly factor/putative transcriptional regulator YihL |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,060,264 | 0 | A | C | 6.3% | 210.2 / 4.3 | 83 | intergenic (+34/‑183) | bipA/yihL | ribosome‑dependent GTPase, ribosome assembly factor/putative transcriptional regulator YihL |
| Reads supporting (aligned to +/- strand): ref base A (38/39); new base C (4/2); total (42/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.76e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.86e-01 | |||||||||||
CGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCA‑GGTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTTTTTGG > NC_000913/4060122‑4060399 | cGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGa < 1:88142/143‑1 (MQ=255) gatgatGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGAt > 1:216819/1‑143 (MQ=255) tgaCGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAACACCTGCCAGCGATGGCA‑g > 1:694766/1‑143 (MQ=255) aCGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCA‑GGt < 1:417716/143‑1 (MQ=255) aaCGGGTAGAAGTGACTGCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAATCGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCATCGCTGGCA‑GGtttt < 2:158939/143‑1 (MQ=255) gctcgAAGTGACGCCGACCTCTATCCGTATTCGTAAACGCCACCTGACGGAAAACGATCGTCGCCGCGCCAACCCCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCATCGCTGGCA‑GGttttttat < 2:38208/139‑3 (MQ=255) tAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCA‑GGTTTTTTTTTg < 1:779668/143‑1 (MQ=255) aaGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCA‑GGTTTTTTTTTGCCt > 2:354274/1‑143 (MQ=255) tgccgccGGCCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCCACCGCGCAACCAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCA‑GGTTTTTTTTTGCCTGTc < 2:532470/138‑1 (MQ=255) aCTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCA‑GGTTTTTTTTTGCCTGTCGt < 2:793988/143‑1 (MQ=255) tCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGCCGCTGAAGTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCA‑GGTTTTTTTTTGCCTGTCGTGa < 2:146942/143‑1 (MQ=255) tCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCA‑GGTTTTTTTTTGCCTGTCGTGa > 1:851342/1‑143 (MQ=255) ccGACATCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGGTTTTTTTTTGCCTGTcttag > 1:241906/1‑139 (MQ=255) gtcttctATCCGTATTCGTAAGCGGCACCTGACGGAAAACGATCGCCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCA‑GGTTTTTTTTTGCCTGTCGTGAgcg < 1:308685/139‑1 (MQ=255) gACCTCTATCTGTATTCTTAATGGTCACCTGACGGAATACGGTCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAATCCTGCCAGCGATGGCA‑GGTTTTTTTTTGCCTGTCGTGAgcg < 1:42303/143‑1 (MQ=255) gACCTCTATCCGTATTCGTAAACGTCTCCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGCTTAATTTCGTTTTTTAGTCATAAACTACCTTCCAGCGATGGCA‑GGTTTTTTTTTGCCTGTCGTAAgcg > 1:429663/1‑143 (MQ=255) gACCTCGTTCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCA‑GGTTTTTTTTTGCCTGTCGTGAgcg < 1:323692/143‑1 (MQ=255) gACCCCTACCCGTATTCGTAAACGTCACCTGACGGAAATCGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCA‑GGTTTTTTTTTGCCTGTCGTGAgcg < 2:697584/143‑1 (MQ=255) aCCGCTAGCCGTATTCGTCAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCA‑GGTTTTTTTTTGCCTGTCGTGAgcgc < 2:827987/143‑1 (MQ=255) tctATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCA‑GGTTTTTTTTTGCCTGTCGTGAGCGcaca < 1:151966/143‑1 (MQ=255) cctATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCA‑GGTTTTTTTTTGCCTGTCGTGAGCGcaca < 1:239025/142‑1 (MQ=255) ctATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAACGACGATTGATTGCGTTGGTTAGTCATAAAAAACCTGCCAGCGATGGCA‑GGTTTTTTTTTAACTGTCGAGAGCGcacag > 2:59265/1‑142 (MQ=255) ctATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGCTTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCA‑GGTTTTTTTTTGCCTGTCGTGAGCGCacac > 2:19486/1‑143 (MQ=255) tCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCGAGCGATGGCA‑GGTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGt > 1:210502/1‑143 (MQ=255) tCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCC‑GGTGTTTTTTTGCCTGTGGTGAGCGCACACCAAAGCGAGt > 2:572304/1‑143 (MQ=255) gcGTCACCTGACGGAAAACGATCGCCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCA‑GGTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTcc < 1:860067/142‑1 (MQ=255) aCGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTGTTTAGGCATAAAAAACCTGCCAGCGATGGCA‑GGTTTTTTTTTGCCTATCGTGAGCGCACACCAATGCGAGTATCAcc > 2:139767/1‑143 (MQ=255) ccTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCA‑GGTTTTTTTTTGCCTGTCGTGAGCGGACCCCAATGCGAGTGTCTCCGttctc > 1:173133/1‑140 (MQ=255) cTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAACGACGATTAATTTCCTTTTTTAGTCATAAACAAACTGCCAGCGCTGGCA‑GGTTCTTTTTTACCTGTCGTGGGCGCACACCACGCCGATCATCACCCTCATaa > 2:535902/1‑143 (MQ=255) cTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTGTTTTAGTCATAAAAAACCTGCCAGCGATGGCA‑GGTGTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTtctac > 2:700139/1‑142 (MQ=255) cGGAAAACGATCGTCCCCGCGCCAACCGCGCACCGAAAGACGGTTAATCTCGTTTTTTAGTCATCAAAAACCTGCCAGCGATGGCA‑GGTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCt < 1:251751/143‑1 (MQ=255) gtaaaaCTGTCGTCGCCGCGCCAACCGCGCACAGAAAGGCGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCA‑GG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCtgt < 1:158265/141‑1 (MQ=255) ggAAAACGATCGTCGCCGCGACAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAAGCTGCCAGCGATGGCA‑GGTTTTTTTTTGCCTGTACTGCGCGCACACCGATGCGAGTATCTCCCTtattaccctg > 2:377410/1‑136 (MQ=255) gaaaaaCGAGCGCCGCGCCGCCAACCCCCCCCCGAAAGCCGATTAATTCCGTTTTTTGGTCATAAAAAACCGGCCAGCGATGCCA‑GTTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCtg < 1:674168/141‑1 (MQ=255) taaaaCGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATCTCGTTTTTTAGTCATAAAAGACCTGCCAGCGATGGCA‑GGTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCtgt < 1:420917/142‑1 (MQ=255) gAAACCGATCGTCGCCGCGACTATCTCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCA‑GGTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCtgt < 2:573152/143‑1 (MQ=255) ataaCGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCA‑GGTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCtgtg < 2:810249/141‑1 (MQ=255) aaaaCGATCGTCGCCGCGCCAACCGCGCACCGAAAGCCGATTAATTTCGTTTTTTAGTCAGAAAAAACCTGCCAGCGATGGCA‑GGTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCtgtg < 1:242526/143‑1 (MQ=255) aaaaCGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAGCCTGCCAGCGATGGCA‑GGTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCtgtg < 2:199012/143‑1 (MQ=255) aaaaCGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCA‑GGTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCtgtg < 1:502842/143‑1 (MQ=255) aaaaCGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCA‑GGTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCtgtg < 1:466723/143‑1 (MQ=255) aaCGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCA‑GGTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGGGGt > 2:324256/1‑143 (MQ=255) gATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCA‑GGTTTTTTTTTGCCTGGCGTGAGCGCACACCAATGCGAGTGTCTCCCTTATCAGTCTGTGGTTAc > 1:879827/1‑143 (MQ=255) gATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCA‑GGCTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTACCTCCCTCCTAAGTCTGTGAttgc > 2:458517/1‑141 (MQ=255) gATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATCTCGTTTTTTAGTCATAAAAAACATGCCAGCGATGGCA‑GGATATTTTTTGCCTGTCGTTAACACACACCAAAGCGAGTATCTCCCTTCTTAGGCTGTGGtttc > 2:169162/1‑141 (MQ=255) tcgtcgCCGCGCCAACCGCGCATTGAATGTCGATTATTTTCGTTTTTTAGTCATAAAATACCTGCCAGCGATGGCA‑GGTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGt < 1:83786/143‑1 (MQ=255) tcgtcgCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCA‑GGTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGGACCTCCCTTATCAGTCTGTGGTTGCGt > 1:674828/1‑143 (MQ=255) cgtcgCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCA‑GGTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTc < 1:583882/143‑1 (MQ=255) tcgCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCA‑GGTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCaa > 2:165460/1‑143 (MQ=255) tcgCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCA‑GGTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCaa < 2:32270/143‑1 (MQ=255) cgccgcGCCAACCGCGCACCGAGAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCA‑GGTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAAt < 2:173140/143‑1 (MQ=255) cgccgcGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAATCCTGCCAGCGATGGCA‑GGTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAAt < 2:416462/143‑1 (MQ=255) cgcgCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCA‑GGTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCCGTGGTTACGTCAATaga > 1:879894/1‑143 (MQ=255) aaCCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCA‑GGTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGCGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCtt < 2:106350/143‑1 (MQ=255) aCCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGCCATAAAATACCTGCCAGCGATGGCA‑GGTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCttg < 1:465515/143‑2 (MQ=255) ccGAAAGACGATTAATTTCGTTTTTTAGTCATAAAACACCTGCCAGCGATGGCA‑GGCTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATCAGTCTGTGGTTACGTCAATAGAGGTCTTTGTCTCAAt > 2:583765/1‑143 (MQ=255) aaGACGATTAATTTCGTTTTTTAGTCATAAACAACCTGCCAGCGATGGCA‑GGTTTTTTGTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATc < 2:428580/143‑1 (MQ=255) aaGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCA‑GGTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATc < 1:567974/143‑1 (MQ=255) aCGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCA‑GGTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCGATAGAGAGCTTTGTCACAATTATCTGc > 1:872953/1‑143 (MQ=255) aCGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCA‑GGTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGc < 1:608533/143‑1 (MQ=255) cGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCA‑GGTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCa < 2:88578/143‑1 (MQ=255) aTTAGTTCCGTTTTTCAGTCATCATACTCATCTCAACGATTGCA‑GTTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCaaa < 2:7832/143‑1 (MQ=255) aTTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCA‑GGTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAAGAGAGAGCTTTGTCACAATTATCTGCaaa > 1:223170/1‑143 (MQ=255) ttCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCA‑GGTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATa > 1:872375/1‑143 (MQ=255) ttttAGTCATAAAAAACCTGCCAGCGATGGCA‑GGTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGt < 1:410251/143‑1 (MQ=255) ttttAGTCATAAAAAACCTGCCAGCGATGGCA‑GGTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGt < 1:19486/143‑1 (MQ=255) aGTCATAAAAAACCTGCCAGCGATGGCA‑GGTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGtccat > 2:366498/1‑139 (MQ=255) gTCATAAACCACCTGCCAGCGATGGCA‑GGTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAAtt < 1:19485/143‑1 (MQ=255) tCATAAAAAACCTGCCAGCGATGGCA‑GGTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCCTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTg > 1:314977/1‑143 (MQ=255) cATAAAAAACCTGCCAGCGATGGCA‑GGTTTCGTTCATCCTGTCGGGAGAACACACCCATGCGAGTATCGCCCTTATAACTCTGTCTTGACGTCAATAGAGAGCTCTGTCACAATTATCGGCGAAGTCATACCACGTTAATTGc > 2:586011/1‑143 (MQ=255) aTAAAACACCTGCCAGCGATGGCA‑GGTTTTTTTTTGCCTGTCGTGAGAGCACAACACTGTGCGTATGTCTATTATAAGTCTGTGGTTGCGTCGATAGAGAGCTTTGTCACACTTATCTGCAACGTCGTACGCCGTTGATTgtt > 1:149781/1‑141 (MQ=255) tAAAAAACCTGCCAGCGATGGCA‑GGTTTTTTTTTGCCTGTCGTGAGCGCACACCCATGCGAGTAGCTCCCTTATAAGTCTGTGGTTACGTCACTAGCGAGCTTTGTCCCAATGATCTGCACAGGCATACGCCGCTGATCGctt > 1:574856/1‑143 (MQ=255) tAAAAAACCTGCCAGCGATGGCA‑GGTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGCGTATCTCCCTTATAAGTCTGTGGTTCCGTCAATAGAGAGCCTTGTCACAGTAATCTGCAAAGTCATACGCCGCTCACTGctt > 2:783482/1‑143 (MQ=255) tAAAAAACCTGCCAGCGATGGCA‑GGTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCGATAGAGAGCTGTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGctt > 1:171595/1‑143 (MQ=255) tAAAAAACCTGCCAGCGATGGCA‑GGTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGctt > 2:148300/1‑143 (MQ=255) aaaaaaCCTGCCAGCGATGGCA‑GGTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAACGTCATACGCCGTTACTTGcttt > 1:655639/1‑143 (MQ=255) aaaaaCCTGCCATCGCTGGCA‑GGTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGctttc > 1:107954/1‑143 (MQ=255) aaaaCCTGCCAGCGATGGCA‑GGTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTCTAAGTCTGTGGTTACGTCAATAGCGAGCTTTGTCACAATTATCTGCAAAGTCATACGACGTTAATTGctttct > 1:3042/1‑143 (MQ=255) aaaCCTGCCATCGCTGGCA‑GGTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCCCTCTTATCTGCAAAGTCATACGCCGTTAATTGctttctt > 2:472823/1‑143 (MQ=255) aaaCCTGCCAGCGATGGCA‑GGTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGctttctt > 2:40925/1‑143 (MQ=255) aaCCTGCCATCGCTGGCA‑GGTTTTTTTTTGCGTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCGGTGGTTACGTCGATAGAGAGGTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGctttcttg > 1:227823/1‑142 (MQ=255) cgtGCGAGCGATGGCA‑GGTTTTTTGTTGCGTGTCGTGAGCGCGCGCCAATGCGAGTATCTCCCTTATATGGCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCttttt < 2:9569/141‑1 (MQ=255) ccTGCCAGCGATGGCA‑GGTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCttttt > 1:606021/1‑143 (MQ=255) gCCAGCGATGGCA‑GGTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACTGCGTTCCTTGCCTTCTTTTTTgg > 2:416846/1‑143 (MQ=255) | CGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCA‑GGTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCAAAGTCATACGCCGTTAATTGCTTTCTTTTTTGG > NC_000913/4060122‑4060399 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |