| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,247,906 | C→A | 5.9% | intergenic (+7/‑65) | malK → / → lamB | maltose ABC transporter ATP binding subunit/maltose outer membrane channel/phage lambda receptor protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,247,906 | 0 | C | A | 5.9% | 275.0 / 3.3 | 120 | intergenic (+7/‑65) | malK/lamB | maltose ABC transporter ATP binding subunit/maltose outer membrane channel/phage lambda receptor protein |
| Reads supporting (aligned to +/- strand): ref base C (66/45); new base A (2/6); total (69/51) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.26e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.81e-01 | |||||||||||
Only 100 of 124 total aligned reads displayed.
TACCGCCAGAACGACGTGGTGTTGGTAGAAGAAGGTGCCACATTCGCTATCGGCCTGCCGCCAGAGCGTTGCCATCTGTTCCGTGAGGATGGCACTGCATGTCGTCGACTGCATAAGGAGCCGGGCGTTTAAGCACCCCACAAAACACACAAAGCCTGTCACAGGTGATGTGAAAAAAGAAAAGCAATGACTCAGGAGATAGAATGATGATTACTCTGCGCAAACTTCCTCTGGCGGTTGCCGTCGCAGCGGGCGTAATGTCTGCTCAGGCAATGGCTGTT > NC_000913/4247768‑4248048 | tACCGCCAGAACGACGTGGTGTTGGTAGAAGAAGGTGCCACATTCGCTATCGGCCTGCCGCCAGAGCGTTGCCATCTGTTCCGTGAGGATGGCACTGCATGTCGTCGACTGCATAAGGCGCCGGGCGTTTAAGCACCCCCCaa > 2:421443/1‑143 (MQ=255) aCCGCCAGAACGACGTGGTGTTGGTAGAAGAAGGTGCCACATTCGCTATCGGCCTGCCGCCAGAGCGTTGCCATCTGTTCCGTGAGGATGGCACCGCATGTCGTCGACTGCCTAAGGAGCCGGGCGTTTAAGCACCCcaccag > 2:173115/1‑140 (MQ=255) ccGCCAGAACGACGTGGTGTTGGTAGAAGAAGGTGCCACATTCGCTATCGGCCTGCCGCCAGAGCGTTGCCATCTGTTCCGTGAGGATGGCACTGCATGTCGTCGACTGCATAAGGAGCCGGGCGTTTAAGCAGCCCACaaag > 1:70197/1‑142 (MQ=255) cGCCAGAACGACGTGGTGTTGGTAGAAGAAGGTGCCACATTCGCTATCGGCCTGCCGCCAGAGCGTTGCCATCTGTTCCGTGAGGATGGCACTGCATGTCGTCGACTGCATAAGGAGCCGGGCGTTTAAGCACCCCCCaaccc > 1:813992/1‑140 (MQ=255) cGCCAGAACGACGTGGTGTTGGTAGAAGAAGGTGCCACATTCGCTATCGGCCTGCCGCCAGAGCGTTGCCATCTGTTCCCTGAGCATGGAACTGCATGTCGTCCACCGCATACGGAGCCGCGCGGTTAAGCACCCCACaaaag > 2:127196/1‑142 (MQ=255) tccggAACGACGTGGTGTTGGGAGAAGACGGGGCCACATTCGGTATCGGCCTGCCGCCAGAGCGTTGCCATCTGTTCCGTGAGGATGGCACTGCATGTCGTCGACTGCATAAGGAGCCGGGCGTTTAAGCACCCCACAAAaca < 2:754748/139‑1 (MQ=255) gCCAGACCGCCGGGGTGTTGGTAGAAGAAGGTGCCACATTCGCTATCGGCCTGCCGCCAGAGCGTTGCCATCTGTCCCGTGAGGAGGGCACTGCATGTCGTCGACTGCATAAGGAGCCGGGCGTTTAAGCACCCCACAAAaca < 1:395597/143‑1 (MQ=255) gCCAGAACGACGTGGTGTTGGTAGAAGAAGGTGCCACATTCGCTATCGGCCTGCCGCCAGAGCGTTGCCATCTGTTCCGTGAGGATGGCACTGGATGTCGGCGACTGCATAAGGAGCCGGGCGGTTAAGCACCCcgcagagca > 1:143184/1‑138 (MQ=255) ccAGAACGACGTGGTGGTGGGAGAAGAAGGTGCCACCTTCGCTATCGGCCCGCCGCCAGAGCGGTGCCATCTTTTCCGGTAGTATGGCACTGCATGTCGTCGACTGCATAAGGTGCCGGGCGTTTAAGCACCCCACAAAacgc < 1:355515/143‑3 (MQ=255) gacgTGGTGTTGGTAGAAGAAGGTGCCACATTCGCTATCGGCCTGCCGCCAGAGCGTTGCCATCTGTTCCGTGCGGATGGCACTGCATGTCGTCGACTGCCTAAGGAGCCGGGCGCTTGAGCACCGCACAAAACACACAAAGc > 2:513483/1‑143 (MQ=255) gacgTGGTGTTGGTAGAAGAAGGTGCCACATTCGCTATCGGCCTGCCGCCAGAGCGTTGCCATCTGTTCCGTGAGGATGGCACTGCATGTCGTCGACTGCATAAGGAGCCGGGCGTTTCAGCCCCCCACCAAacacactacgc > 1:316686/1‑138 (MQ=255) gtggtgTTGGTAGAAGAAGGTGCCACATTCGCTATCGGCCTGCCGCCAGAGCGTTGCCATCTGTTCCGTGAGGATGGCACTGCATGTCGTCGACTGCATAAGGCGCCGGGCGTTTTAGCCCCCCGCCAACCACACAAAGCCtt > 1:374246/1‑142 (MQ=255) gggtgCTGGTGGAAGAAGGTGCCACAGCCGCTATCGGCCTGCCGCCAGAGCGTTGGCACCTGTTCCGTGAGGATGGCACTGCATGTCGTCGACTGCATAAGGAGCCGGGCGTTTAAGCACCCCACAAAACACACAAAGCCTGt < 1:246761/142‑1 (MQ=255) ttGGAAGAAGAAGGTGCCACATGCGCTATCGGCCTGCCGCCAGAGCGTTGCCATCTGTTCCGTGAGGACGGCACTGCATGTCGTCGACTGCAGAAGGAGCCGGGCGTTTAAGCACCCCACAAAACACACAAAGCCTGTCACAg < 2:560787/143‑1 (MQ=255) tgggTAGAAGAAGGTGCCACATCCGCTAGCGGCCTGCCGCCAGAGCGTTGCCATCTGTTCCGTGAGGATGGCACTGCATGTCGTCGACTGCATACGGAGCCGGGCGTTTAAGCACCCCACAAAACACACAAAGCCTGTCACAg < 1:409344/141‑1 (MQ=255) gggTAGAGGAAGGGGCCACAGTCGCTATCGGCCTGCCGCCAGAGCGTTGCCATCTGGTCCGTGAGGATGGCACTGCATGTCGTCGACTGCATAAGGAGCCGGGCGTTTAAGCACCCCACAAAACACACAAAGCCTGTCACAgg < 1:477664/142‑1 (MQ=255) ggTATAAGAAGGTGCCTGATACGCTGACGGCCTGCCGACAGGACGATTCGATCGGTTCCGTGAGGATGGCACTGCATGTCGTCGACTGCATAAGGAGCCGGGCGTTTAAGCACCCCACAAAACACACAAAGCCTGTCACAGGt < 1:402354/143‑1 (MQ=255) tAGAAGAAGGTGCCACATTCGCTATCGGCCTGCCGCCAGAGCGTTGCCATCTGTTCCGTGAGGATGGCACTGCATGTCGTCGACTGCATAAGGAGCCGGGCGTTTAAGCACCCCCCAAAACACACAAAGCCTGCCACAGGTGa > 2:141517/1‑143 (MQ=255) agaagaAGGTGCCACATTCGCTATCGGCCTGCCGCCAGAGCGTTGCCATCTGTTCCGTGAGGATGGCACTGCATGTCGTCGACTGCATAAGGAGCCGGGCGTTTAAGCACCCCACAAAACACACAAAGCCTGTCACAGGTGAt < 1:580138/143‑1 (MQ=255) agaagaAGGGGCCACATTCGCTATCGGCCTGCCGCCAGAGCGTTGCCATCTGTTCCGTGAGGATGGCACTGCATGTCGTCGACTGCATAAGGAGCCGGGCGTTTAAGCACCCCACAAAACACACAAAGCCTGTCACAGGTGAt < 1:710293/143‑1 (MQ=255) gaagGTGCCACATTCGCTATCGGCCTGCCGCAAGAGCGTTGCCATCTGTTCCGTGAGGATGGCACTGCATGTCGTCGACTGCATAAGGAGCCGGGCGTTTAAGCACCCCACAAAACACACAAAGCCTGTCACAGGCGAGGTGa > 2:737128/1‑143 (MQ=255) ggcgCCAGATTCGCTATGGGCCTGCCGCCAGAGCGTTGCCATCTGTTCCGTGAGGATGGCACTGCATGTCGTCGACTGCATAAGGAGCCGGGCGTTTAAGCACCCCACAAAACACACAAAGCCTGTCACAGGTGATGTGaaaa < 1:874338/140‑1 (MQ=255) ggTGCCACATTCGCTATCGGCCTGCCGCCAGAGCGTTGCCATCTGTTCCGTGAGGATGGCACTGCATGTCGTCGACTGCATAAGGAGCCGGGCGAGTAAGCACCCCACAAAACACACAAAGCCTGTCACACGTGACGTGaaaa > 2:178670/1‑143 (MQ=255) gCCACATTCGCTATCGGCCTGCCGCCAGAGCGTTGCCATCTGTTCCGTGAGGATGGCACTGCATGTCGTCGACTGCATAAGGCGCCGGGCGTTTAAGCGCCCCACAAAACACACAAAGCCTGTCACAGGTGATGTGgaaacgg > 1:775147/1‑140 (MQ=255) gCCACATTCGCTATCGGCCTGCCGCCAGAGCGTTGCCATCTGTTCCGTGAGGATGGCACTGCATGTCCTCGACTGCATAAGGAGCCGGGCGTTTAAGCACCCCACAAAACACACAAAGCCTGTCACAGGCGATGGGCAaaaag > 2:442690/1‑143 (MQ=255) gCCACACCCGCGATCGGCCTGCCGCCAGAGCGCTGCCATCTGTTCCGTGAGGATGGCACGGCATGTCGTCGACTGCATAAGGAGCCGGGCGTTTAAGCACCCCACAAAACACACAAAGCCCGTCACAGGTGATGTGAAaaaag < 1:569872/143‑1 (MQ=255) cactCGCCATCGGCCTGCCGCCAGCGCGTTGCCACCTGTTCCGTGAGGATGGCACTGCATGTCGTCGACTGCATAAGGAGCCGGGCGTTTAAGCACCCCACAAAACACACAAAGCCTGTCACAGGTGATGTGAAaaaagaaaa < 1:384237/140‑1 (MQ=255) cacgcGCTATCGGCCTGCCGCCAGAGCGTTGCCATCTGTTCCGTGAGGATGGCACTGCATGTCGTCGACTGCATAAGGGGCCGGGCGTTTAAGCACCCCACAAAACACACAAAGCCTGTCACAGGTGATGTGAAaaaagaaaa < 1:202093/139‑1 (MQ=255) caTTCGCTAGCGGGCTGCCGCCAGGGCGTTGCCATATGTTCCGTGAGGATGGCACTGCATGTCGTCGACTGCATAAGGAGCCGGCCGTTTAAGCACCCCACAAAACACACAAAGCCTGTCACAGGTGATGTGAAaaaagaaaa < 2:514332/143‑1 (MQ=255) tagcGGCCTGCCGCCAGGGCGGTGCCATCTGTTCCGTGAGGAGGGCACTGCATGTCGTCGACTGCATAAGGCGCCGGGCGTTTAAGCACCCCACAAAACACACAAAGCCTGTCACAGGTGATGTGAAAAAAGAAAAGCAATGa < 2:724976/140‑1 (MQ=255) aTCGGCCTGCCGCCAGAGCGTTGCCATCTGTTCCGTGAGGATGGCACTGCATGTCGTCGACTGCATAAGGAGCCGGGCGTTTAAGCACCCCACAAAACACACAAAGCCTGTCACAGGTGATGTGAACAAAGACAAGCCATGAc > 2:685420/1‑143 (MQ=255) tCGGCCTGCCGCCAGAGCGTTGCCATCTGTTCCGTGAGGATGGCACTGCATGTCGTCGACTGCATAAGGAGCCGGGCGTTTAAGCACCCCACAAAACACACAAAGCCTGTCACAGGTGATGTGAAAAAAGAAAAGCAATGACt > 1:56692/1‑143 (MQ=255) tCGGCCTGCCGCCAGAGCGTCGCCATCTGTTCCGTGAGGATGGCACTGCAGGTCGTCGACTGCATAAGGAGCCGGGCGTTTAAGCCCCCCACACAACACATAAAGCCTGTCACAGGTGATGTGAAAAAAGAAAAGCAATGACt < 1:606137/143‑1 (MQ=255) cGGCCTGCCGCCAGAGCGTTGCCATCTGTTCCGTGAGGATGGCACTGCATGTCGTCGACTGCATAAGGAGCCGGGCGTTTAAGCACCCCACAAAACACACAAAGCCTGTCACAGGGGATGGGAAAAAAGAAAAGCAATggcgc > 2:661604/1‑139 (MQ=255) gCCTGCCGCCAGAGCGTTGCCATCTGTTCCGTGAGGATGGCACTGCATGTCGTCGACTGCATAAGGAGCCGGGCGTTTAAGCACCCCACAAAACACACAAAGCCTGTCACAGGTGATGTGAAAAAAGAAAAGCAATGACTCAg > 1:436440/1‑143 (MQ=255) gCCTGCCGCCAGAGCGTTGCCATCTGTTCCGTGAGGATGGCACTGCATGTCGTCGACTGCATAAGGAGCCGGGCGGTTAAGCACCCCACAAAACACACAAAGCCTGTCACCGGGGATGTGAGAAAAGAGAAGCAATGGCTGAg > 1:699631/1‑143 (MQ=255) cTGTCGACAGAGCGTGGCCATCTGTTCAGTGAGGATGGCACTGCATGTAGTCGACTGTATAAGGAGCCGGGCGTTCAAGCAAGCAACAAAACACACAAAGCCTGTCACAGGTGATGTGAAAAAAGAAAAGCAATGACTCAGga < 2:440347/143‑1 (MQ=255) tGCCGCCAGAGCGTTGCCATCTGTTCCGTGAGGATGGCACTGCATGTCGTCGCCTGCATAAGGAGCCGGGCGCTTAAGCACCCCACAAACCACACCAAGCCTGTCACAGGAGATGTGAAAAAAGAAAAACAATGACACACgaa > 1:851149/1‑142 (MQ=255) tGCCGCCAGAGCGTTGCCATCTGTTCCGTGAGGATGGCACTGCATGTCGTCGACTGCATAAGGAGCCGGGCGTTTAAGACCAGAACAAAGCTCACAAAGCCTGTCACAGGTGATGTGAAAAAAGAAAAGCAATGACTCAgggg > 1:406075/1‑141 (MQ=255) ggaggccAGACAGTTTCCATCTGTGCCGGGAGGAGAGCACTGCAAGTAGTCGACTGCATAAGGAGCCGGTCGTTTAAGAAAGCAAAAAATCACACAAAGCCTGTAACAGGTGATGTGAAAAAAGAAAAGCAATGACTCAGgag < 2:137422/139‑1 (MQ=255) gccgccATAGCTTTGCCTTCTTTTCCGTGAGGATGGCACTGCATGGCGCCGACTGCATAAGGAGCCGGGCGTTTAAGCACCCCACAAAACACACAAAGCCTGTCACAGGTGATGTGAAAAAAGAAAAGCAATGACTCAGgaga < 1:286620/143‑1 (MQ=255) gccAGAGCGTTGCCATCTGTTCCGTGAGGATGGCACTGCATGTCGTCGACTGCATAAGGAGCCGGGCGTTTAAGCACCCCACAAAACACACAAAGCCTGTCACAGGTGATGTGAAAAAAGAAAAGCAATGACTCAGGAGCTAg > 2:22679/1‑143 (MQ=255) gccAGAGCGTTGCCATCTGTTCCGTGAGGATGGCACTGCATGTCGTCGACTGCATAAGGAGCCGGGCGTTTAAGCACCCCACAAAACACACAAAGCCTGTCACAGGTGATGTGAAAAAAGAAAAGCAATGACTCAGGAGATAg > 1:638101/1‑143 (MQ=255) ccAGAGCGTTGCCATCTGTTCCGTGAGGATGGCACTGCATGTCGTCGACTGCATAAGGAGCCGGGCGTTTGAGCACCCCACAAAACACACAAAGCCTGTCACAGGTGATGTGAAAAAAGGAAAGCAATGACTCAGGGGATAGa > 2:34056/1‑143 (MQ=255) tagagCGTTGCCATTTGTTTCGTGAGGATGGCACTGCATGTCGGCGACGGCATAAGGAGCCGGGCGTTTAAGCACCCCACAAAACACACAAAGCCTGTCACAGGTGATGTGAAAAAAGAAAAGCAATGACTCAGGAGATAGaa < 1:705729/142‑1 (MQ=255) caggccGTTGCCATCTTTACAGGGAGGATGGCACACCATGTCGTCGAATGCATAAGGAGCCGGGCGTTTAAGCACCCCACAAAACACACAAAGCCTGACACAGGTGATGTGAAAAAAGAAAAGCAATGACTCAGGAGATAGaa < 2:691210/138‑1 (MQ=255) cAGAGTGTTGCATTCTGGTCCGTGAGTACTGCACTGAAAGGCGTCGACTGCATAAGGAGTCGGGCGTTTAAGCATCCCACAAAACACACAAAGCCTGTCACAGGTGATATAAAAAAAGAAAAGCAATGACTCAGGAGATAGaa < 2:409400/143‑1 (MQ=255) agagCGTTGCCATCTGTTCCGTGAGGATGGCACTGCATGCCGTCGACTGCATAAGGAGCCGGGCGTTTAAGCACCCCACAAAACACACAAAGCCTGTCACAGGTGATGTGAAAAAAGAAAAGCAATGACTCAGGAGATAGAat < 1:85100/143‑1 (MQ=255) agCGTTGCCATCGGTTCCGTGAGGATGGCACTGCATGTCGTCGACTGCATAAGGAGCCGGGCGTTTAAGCACCCCACAAAACACACAAAGCCTGTCACAGGTGATGTGAAAAAAGAAAAGCAATGACTCAGGAGATAGAatga < 1:433962/143‑1 (MQ=255) ggctGCCATCTGCTCCGTGAGGATGGCACTGCATGACGTCGACGCCATAAGGAGCCGGGCGTTAAAGCACCCAACAAAACACACAAAGCCTGTCACAGGTGATGTGAAAAAAGAAAAGCAATGACTCAGGAGATAGAatgatg < 2:25424/140‑1 (MQ=255) ttGCCATCTGTTCCGTGAGGATGGCACTGCATGTCGTCGACTGCATAAGGAGCCGGGCGTTTAAGCACCCCACAAAACACACAAAGCCTGTCACAGGAGATGTGAAAAAAGAAAAGCAATGACTCAGGAGATCGAATgacgat > 2:767458/1‑143 (MQ=255) gtcATCTGTTCAGTGTGGATGGAACTGCATGTCGGCGAATGCATAAGGAGCCGTGCGTTTAAGCACCCAAAAAAATACACAAAGTGTGTAACAGGTGATGTGAAAAAAGAAAAGCAATGACTCAGGAGATAGAATGATGATTa < 2:263653/141‑1 (MQ=255) gCCATCTGTTCCGTGAGGATGGCACTGCATGTCGTCGACTGCATAAGGAGCCGGGCGTTTAAGCACCCCACAAAACACACAAAGCCTGTCACAGGTGATGTGCAAAAAGAAAAGCAATGACTCAGGCGCTAGACTGAGGATTa > 2:701562/1‑143 (MQ=255) gCCACCGGTGCCGTTGGGATGGCACTGCATGTCGTCGACTGCATAAGGAGCCGGGCGTTTAAGCACCCCACAAAACACACAAAGCCTGTCCCAGGTGATGTGAAAAAAGAAAAGCAATGACTCAGGAGATAGAATGATGATTa < 1:478778/143‑1 (MQ=255) ccATCTGTTCCGTGAGGATGGCACTGCATGTCTTCGACTGCATAAGGAGCCGGGCGTTTAAGCACCCCACAAAGCACACAAAGCCTGTCACAGGTGAGGTGAAAAAAGAAAAGCAACGACTCACGAGCTCGAATGATCATTAc > 2:149378/1‑143 (MQ=255) cATCTGTTCCGTGAGGATGGCACTGCATGTCGTCGACTGCATAAGGAGCCGGGCGTTTAAGCACCCCACAAAACACACAAAGCCTGTCACAGGTGATGTGAAAAAAGAAAAGCAATGACTCAGGAGATAGAATGATGATTAct > 1:755084/1‑143 (MQ=255) agcTGTTCCGTGAGGATGGCACTGCATGTCGTCGACTGCATAAGGAGCCGGTCGTTTACGCACCCCACAAAACACACAAAGCCTGTCACAGGTGATGTGAAAAAAGCAAAGCACTGACTCAGCCGCTAGGATGCTGATTActa > 2:437654/3‑142 (MQ=255) aTCTGTTCCGTGAGGATGGCACTGCATGTCGTCGACTGCATAAGGAGCCGGGCGTTTAAGCACCCCACAAAACACACAAAGCCTGTCACAGGTGATGTGAAAAAAGAAAAGAAATGACTCAGGAGATAGAATGATGATTActc > 1:378434/1‑143 (MQ=255) tGAGGATGGCACTGCATGTCGTCGACTGCATAAGGAGCCGGGCGTTTAAGCACCCCACAAAACACACAAAGCCTGTCACAGGAGATGTGAAAAAAGCAAAGCAATGACTCAGGAGCTAGAATGATGACTACTCTGCGCAAACt > 2:491370/1‑143 (MQ=255) gAGGATGGCACTGCATGTCGTCGACTGCATAAGGAGCCGGGCGTTTAAGCACCCCACAAAACACACAAAGCCTGTCACAGGTGATGTGAAAAAAGAAAAGCAATGACTCAGGAGATAGAATGATGATTACTCTGCGCAAACtt < 2:281752/143‑1 (MQ=255) gagggCACGGCATGGCGTCGAATGCATGAGGAGCCGGGCGTTTAAGCACCCCACAAAACACACAAAGCCTGTCACAGGTGATGTGAAAAAAGAAAAGCAATGACTCAGGAGATAGAATGATGATTACTCTGCGCAAACTTCct < 1:182034/140‑1 (MQ=255) gATGGCACTGCATGTCGTCGACTGCATAAGGAGCCGGGCGTTTAAGCACCCCACAAAACACACAAAGCCTGGCACAGGTGATGTGAAAAAAGAAAAGCAATGGCTTGGGCGAAAGAATGATGATTACTCTGCGACAAATTCct > 2:859325/1‑143 (MQ=255) aCTGCATGTCGTCGACTGCATAAGGAGCCGGGCGTTTAAGCACCCCACAAAGCACACAAAGCCTGTCACCGGTGATGTGAAAAAAGAAGAGCAATGACTCAGGAGATAGAATGATGATTACTCTGCGCAAACTTCATCTGGCg > 2:508186/1‑143 (MQ=255) aCTGCATGTCGTCGACTGCATAAGGAGCCGGGCGTTTAAGCACCCCACAAAACACACAAAGCCTGTCACAGGTGATGTGAGAAAAGAAAAGCAATGACTCAGGAGATAGAATGATGAAAACTCGGCGCGAACTTCCTCTGGCg > 1:737679/1‑143 (MQ=255) aCTGCATGTCGTCGACTGCATAAGGAGCCGGGCGTTTAAGCACCCCACAAAACACACAAAGCCTGTCACAGGTGATGTGAAAAAAGAAAAGCAATGACTCAGGAGATAGAATGATGATTACTCTGCGCAAACTTCCTCTggag > 1:381263/1‑141 (MQ=255) cTGCACGTCGTCGACTGCATAAGGAGCCGGGCGTTTACGCACCCCACAAAACACACAAAGCCTGTCACAGGTGATGTGAAAAAAGAAAAGCAATGACTCAGGAGATAGAATGATGATTACTCTGCGCAAACTTCCTCTGGCgg < 1:447449/143‑1 (MQ=255) tGCATGTCGTCGACTGCATAAGGAGCCGGGCGTTTAAGCACCCCACAAAACACACACCCCCTGTCACAGGTGATGTGAAAAAAGAAAAGCAATGACTCAGGAGATAGAATGATGATTACTCTGCGACAGCCACCTCTGGCGGt > 2:772372/1‑143 (MQ=255) cATGTGGTCGACTGCATAAGGAGCCGGGCGTTTAAGAACCCCACAAAACACACAAAGCCTGTCACAGGTGAGGTGAAAAAAGAAAAGCAATGACTCAGGAGATAGAATGATGATTACTCTGCGCAAACTTCCTCTGGCGGTTg < 1:176529/143‑1 (MQ=255) cATGTCGTCGACTGCATAAGGAGCGGGGCGTTTAAGCACCCCACAAAACACACAAAGCCTGTCACAGGTGATGTGAAAAAAGAAAAGCAATGACTCAGGAGATAGAATGATGATTACTCTGCGCAAACTTCCTCTGGCGGTTg < 2:818897/143‑1 (MQ=255) tcgtcgACTGCATAAGGAGCCGGGCGTTTGAGCACCCCACAAAACACACAAAACCTGTCACAGGTGACGAGAACAAAGAAAAGCAATGCCTCAGGAGATAGCATGATGATTACTCTGCGCCAACTTCCACTGGCggcgccccc > 1:624728/1‑136 (MQ=255) cggcgACGGCATACGGAGCCGGGCGTTTAAGCACCCCACAAAACACACAAAGCCTGTCACAGGTGATGTGAAAAAAGAAAAGCAATGACTCAGGAGATAGAATGATGATTACTCTGCGCAAACTTCCTCTGGCGGTTGCCGTc < 1:353955/140‑1 (MQ=255) gtcgACTGCATAAGGAGCCAAGCGTTTAAGCACCCCACAAAACACACAAAGCCTGTCACAGGTGATGTGAAAAAAGAAAAACAAAGACTAAAGAGATAGAATGATGATTACTCTGCGCAAACTTACTCAGGCGGTAGCCGTCg > 2:666363/1‑143 (MQ=255) tcgACTGCATAAGGAGCCGGGCGTTTAAGCACCCCACAAAACACACAAAGCCTGTCACAGGTGATGTGAAAAAAGAAAAGCAATGACTCAGGAGATAGAATGATGATTACTCTGCGCAAACTTCCTCTGGCGGTTGCCGTCGc > 1:85329/1‑143 (MQ=255) tcgACTGCATAAGGAGCCGGGCGTTGAAGCACCCCACAAAGCACACAAAGCCTGTCACAGGTGATGTGAAAAAAGAAAAGCAATGACTCAGGAGATAGAATGATGATTACTCTGCGCAAACTTCCTCTGGCGGTTGCCGTCGc < 2:314519/143‑1 (MQ=255) gACTGCATAAGGAGCCGGGCGTTTAAGCACCCCACAAAACACACAAAGCCTGTCACAGGTGATGTGAAAAAAGAAAAGCAATGACTCAGGAGATAGAATGATGATTACTCTGCGCACACTCCCTCTGGCGGTAGCCGTCCCAg > 2:617470/1‑143 (MQ=255) tGCATAAGGAGCCGGGCGTTTAAGCACCCCACAAAACACACAAAGCCTGTCACAGGTGATGTGAAAAAAGAAAAGCAATGACTCAGGAGATAGAATGATGATTACTCTGCGCAAACTTCCTGTGGCGGTTGCCGGCGCCGCgg > 2:608738/1‑143 (MQ=255) tGCATAAGGAGCCGGGCGTTTAAGCACCCAACACAACACACAAAGCCTGGCACAGGTGATGTGAAAAAAGAAAAGCAATGACTCAGGAGATAGAATGATGATTACTCTGCGCACACTTCCTCTGGCGGATGCCGACGCAGCgg > 2:132249/1‑143 (MQ=255) cATAAGGAGCCGGGCGTTTAAGCACCCCACAAAACACACAAAGCCTGTCACAGGTGATGTGCAAAAAGAAAAGCAATGACTCAGGAGATAGAATGATGATTACTCTGCGCAAACTTCCTCTGGCGGTTGCCGTCGCAGCGGGc > 2:698617/1‑143 (MQ=255) aTAAGGAGCCGGGCGTTTAAGCACCCCACTAACCACACCATGCCTGTCACTGGTGATGTGAAAAAAGAAAAGAAATGACTCAGGAGATAGAATGATGATTACTCTGCGCAAACTTCCTCTGGCGGTTGCCGTCGCAGCGGGCg > 1:231081/1‑143 (MQ=255) gaggacGGGCTGTTAACGACACCACAAAACACACAAAGCCGGCCACAGGTGATGTGAAAAAAGAAAAGCAATGACTCAGGAGATAGAATGATGATTACTCTGCGCAAACTTCCTCTGGCGGTTGCCGTCGCAGCGGGCGTAAt < 2:304602/138‑1 (MQ=255) gAGCCGGGCGTTTAAGCACCCCACAAAACACACAAAGCCTGTCACAGGGGATGTGAAAAAAGAAAAGCAATGACTCAGGAGATAGAATGATGATTACTCTGCGCAAACTTCCTCTGGCGGTTGCCGTCGCAGCGGGCGTCATg > 1:341663/1‑143 (MQ=255) gCCGGGCGTTTAAGCACCCCACAAAACACACAAAGCCTGTCACAGGTGATGTGAAAAAAGAAAAGCAATGACTCAGGAGATAGAATGATGATTACTCTGCGCAAACTTCCTCTGGCGGCTGCCGTCGCAGCGGGCGTaggggc > 2:721147/1‑138 (MQ=255) ccGGGCGGTTAAGCACCCCACAAAACACACAGGGCCAGGCACTTTTGACGTGAAAAAAGAAAAGCAATGGCGCAGCGTATTGATTGAGGATTACTCTGCGCAGACTTGCGCGGGCGGGGGCCGTCGCAGCGGGCGTAGTGTcc > 2:585863/1‑142 (MQ=255) cGTTTAAGCACCCAACAAAACACGCAAAGCCTGTCACAGGTGATGTGAAAAAAGAAAAGCAATGACTCAGGAGATAGAATGATGATTACTCTGCGCAAACTTCCTCTGGCGGTTGCCGTCGCAGCGGGCGTAATGTCTGCTCa < 1:178670/143‑1 (MQ=255) cGTGTAAGCACCCCACAAAACACACAAAGCCTGTCACAGGTGATGTGAAAAAAGAAAAGCAATGACTCAGGAGATAGAATGATGATTACTCTGCGCAAACTTCCTCTGGCGGTTGCCGTCGCAGCGGGCGTAATGTCTGCTCa < 1:307020/143‑1 (MQ=255) gTTTAAGCACCCCACAAAACACACAAAGCCTGTCACAGGTGATGTGAAAAAAGAAAAGCAATGACTCAGGCGATCGAATGATGATTACTCTGCGCAAGCTTCCCCTCGCGGTTGCCGCCGCACCGGGCGCAACGTCTGCTCAg > 1:209247/1‑143 (MQ=255) gTTTAAGCACCCCACAAAACACACAAAGCCTGTCACAGGTGATGTGAAAAAAGAAAAGCAATGACTCAGGAGATAGAATGATGATTACTCTGCGCAAACTTCCTCTGGCGGTTGCCGTCGCAGCGGGCGTAATGTCTGCTCAg < 1:675589/143‑1 (MQ=255) gTTTAAGCACCCCACAAAACACACAAAGCCTGTCAAAGGTGATGTGAAAAAAGAAAAGCAATGACTCAGGAGATAGAATGATGGTTACTCTGCGCAAACTTCCTCTGGCGGATGCCGTCGCAGCGGGCGTAAGGTACGCTCAg > 2:234553/1‑143 (MQ=255) ttcaaGCACCCCACAAAACACACAAAGCGTGTGACAGGTGATGTGAAAAAAGAAAAGCAATGACTCAGGAGGTAGAATGATGATTACGCTGCGCAAACTTCCTCTGGCGGTTGCCGTCGCAGCGGGCGTAATGTCTGCTCAgg < 2:179224/140‑1 (MQ=255) ttAAGCACCCCACAAAACACACAAAGCCTGTCACAGGTGATGTGAAAGAAGAAAAGCAATGACTCAGGAGATAGAATGATGATTACTCTGCGCAAACTTCCTCTGGCGGTTGCAGTCGCAGCGGGCGTAATGTCGGCTCAGGc > 2:255266/1‑143 (MQ=255) tAAGCACCCCACAAAACACACAAAGCCTGTCACAGGTGATGTGAAAAAAGAAAAGCAATGACTCAGGAGATAGAATGATGATTACTCTGCGCAAACTTCCTCTGGCGGTTGCCGTCGCAGCGGGCGTAATGTCTGCTCAGGCa > 1:254285/1‑143 (MQ=255) tAAGCACCCCACAAAACACACAAAGCCTGTCACAGGTGATGTGAAAAAAGAAAAGCAATGACTCAGGAGATAGAATGATGATTACTCTGCGCAAACTTCCTCTGGCGGTTGCCGTCGCAGCGGGCGTAATGTCTGCTCACGcc > 2:851061/1‑142 (MQ=255) aaGCACCCCACAAAACACACAAAGCCTGTCCCAGGTGATGTGAAAAAAGAAAAGCAATGACTCAGGAGATAGAATGATGATTACTCTGCGCAAACTCCGTCTGGCGGTTGACGTCGGAGCGGGCGTAATGTCTGCTCGGGCaa > 2:830298/1‑143 (MQ=255) aaGCACCCCACAAAACACACAAAGCCTGTCACAGGTGATGTGAAAAAAGAAAAGCAATGACTCAGGAGATAGAATGATGATTACTCTGCGCAAACTTCCTCTGGCGGTTGCCGTCGCAGCGGCCGTAACGTCTGCTCAGGCaa > 2:43304/1‑143 (MQ=255) aGCACCCCACAAAACACACAAAGCCTGTCACAGGTGATGTGAAAAAAGAAAAGCAATGACTCAGGAGATAGAATGATGATTACTCTGCGCAAACTTCCTCTGGCGGTTGCCGTCGCAGCGGGCGTAATGTCTGCTCAGGAAAt > 2:400693/1‑143 (MQ=255) gCACCCCACAAAACACACAAAGCCTGTCACAGGTGATGTGAAAAAAGAAAAGCAATGACTCAGGAGCTAGAATGATGATTACTCTGCGCAAACTTCCTCTGGCGGGTGCCGTCGCAGCGGGCGTAATGCCTGCTCAGGccggg > 2:359411/1‑139 (MQ=255) gCACCCCACAAAACACACAAAGCCTGTCACAGGTGATGTGAAAAAAGAAAAGCAATGACTCAGGAGATAGAATGATGATTACTATGCGCAAACTTCCTCTGGCGGTTGCCGTCGCAGCGGACGTAAGGCCTGCTCAGGCAATg > 2:613117/1‑143 (MQ=255) cACCCCACAACACACACAAAGCCTGTCACAGGTGATGTGAAAAAAGAAAAGCAATGACTCAGGAGATAGAATGATGATTACTCTGCGCAAACTTCCTCTGGCGGTTGCCGTCGCAGCGGGCGTAATGTCTGCTCAGGCAATgg < 1:110079/143‑1 (MQ=255) cccACAAAACACACAAAGCCTGTCACAGGTGATGTGAAAAAAGAAAAGCAATGACTCAGGAGATAGAATGATGATTACTCTGCGCAAACTTCCTCTGGCGGTTGCCGTCGCAGCGGGCGTAATGTCTGCTCAGGCAATGGCTg > 1:634877/1‑143 (MQ=255) cacaAAACACACAAAGCCTGTCACAGGTGATGTGAAAAAAGAAAAGCAATGACTCAGGAGATAGAATGATGATTACTCTGCGCAAACTTCCTCTGGCGGTTGCCGTCGCAGCGGGCGTAATGTCTGCTCAGGCAATGGCTGtt > 1:367508/1‑143 (MQ=255) | TACCGCCAGAACGACGTGGTGTTGGTAGAAGAAGGTGCCACATTCGCTATCGGCCTGCCGCCAGAGCGTTGCCATCTGTTCCGTGAGGATGGCACTGCATGTCGTCGACTGCATAAGGAGCCGGGCGTTTAAGCACCCCACAAAACACACAAAGCCTGTCACAGGTGATGTGAAAAAAGAAAAGCAATGACTCAGGAGATAGAATGATGATTACTCTGCGCAAACTTCCTCTGGCGGTTGCCGTCGCAGCGGGCGTAATGTCTGCTCAGGCAATGGCTGTT > NC_000913/4247768‑4248048 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |