| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,270,144 | G→C | 6.9% | intergenic (+17/‑94) | aphA → / → yjbQ | acid phosphatase/phosphotransferase/UPF0047 protein YjbQ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,270,144 | 0 | G | C | 6.9% | 311.6 / 13.7 | 112 | intergenic (+17/‑94) | aphA/yjbQ | acid phosphatase/phosphotransferase/UPF0047 protein YjbQ |
| Reads supporting (aligned to +/- strand): ref base G (54/50); new base C (3/5); total (57/55) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.86e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.15e-01 | |||||||||||
Only 100 of 114 total aligned reads displayed.
TTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCT‑TGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTGTTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTTATCAAGGAGCAGCACATGTGGTATCAAAAGACGCTCAC‑GCTTAGCGCCAAATCTCGTGGGTTTC > NC_000913/4270003‑4270286 | ttACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCT‑CGCCACCAGCGGGTGCGTTTGGTGAAGAGGCGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGa > 2:117564/1‑143 (MQ=255) tACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCT‑TGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGAt < 1:741595/143‑1 (MQ=255) acggccgcACGCGATGTCGGAGCCCGTGGTAGCCGCATGCTGCGCGCCTCCAGCTCTACCTACAAACCCG‑TGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATg < 1:364555/140‑1 (MQ=255) ccgccgAACGCGATGTCGGCGGTCGGGGTGTCCGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCT‑TGCCACAAGCGGGTGCGTTTGGTGACGAGGAGACCGTCAATTCAGAATACTGACAGAGCGGGCGCGCGTGATGc > 2:316939/1‑143 (MQ=255) caggcgATGTCGGCGCTCGTGGTATCCGCCTTCTGCGCGCCGCCAACGCTACCTACAAACCCT‑TGCCACACGCGGGTGCGTTTGGTGAAGAGGGGATCGTCGATTCAGAATACTGACAGAGCGGGAGAGCATCACGCTCTccc < 2:333387/140‑1 (MQ=255) cgcgATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCT‑TGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGa < 1:811548/143‑1 (MQ=255) gcgATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCT‑TGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCATCACGCTCTCCCgct < 1:866928/143‑3 (MQ=255) gccaTGCCGGCGCTCGCGGTATCCGCATTCTGCGCGCCTCCAACTCTCCCTACAAACACT‑TGCCACAAGCGGGTGCGTTTTGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGaa < 1:166336/140‑1 (MQ=255) cgATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCT‑TGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCATCACGCTCTCCCgctc < 1:525557/143‑4 (MQ=255) cgATGTCGGCGCTCGCGGTATGCGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCT‑TGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAAt < 1:122573/143‑1 (MQ=255) gATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCT‑TGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATg < 1:788407/143‑1 (MQ=255) tGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCT‑TGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTACCGAATGCt > 2:148306/1‑143 (MQ=255) tCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCT‑TGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTGt > 2:822315/1‑143 (MQ=255) tCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCT‑TGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGGGATGCTCTCCCGAATGCTGt > 1:827649/1‑143 (MQ=255) gcgcTCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCT‑TGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTGtttt < 1:829984/143‑1 (MQ=255) cgcTCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCT‑TGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTGttttt < 1:83992/143‑1 (MQ=255) gcTCGTGGTAGCCGCGTTCTGCGCGCCGCC‑AGTCCTCTAACTTCCCCTATGCCGCAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTGtttttt < 1:641005/143‑1 (MQ=255) cTCGTGGTAGCCGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCT‑TGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTGttttttt > 2:850924/1‑143 (MQ=255) tCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCT‑TGCCACGAGCGGGGGCGTTTGGTGCAGAGGTGATCGTCAATTCAGACTGCTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTGtttttttc > 1:758173/1‑142 (MQ=255) tCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCT‑TGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGACTACTGACAGAGCGGGGGAGCGTGGTGCGCTCCCGACGGCTGtttttgtc > 2:234009/1‑140 (MQ=255) gTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCT‑TGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTGTTTTTTTAAt < 2:862643/143‑1 (MQ=255) ggTATCCGGATGCGGCGCGCCTCCAACTCTACCGACAAACCCT‑GGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTGTTTTTTTAATca < 2:61341/143‑1 (MQ=255) aTCCGGATTCTGCGCGCCTCCAACTCTACCTACAAACCCT‑TGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTGTTTTTTTAATCacac < 2:614546/143‑1 (MQ=255) tCCGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCT‑TGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTGTTTTTTTAATCACAcc < 2:745300/143‑1 (MQ=255) cGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCT‑TGCCACAAGCGGGTGCGTTTGGTGATGCGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGACAGCTGTTTTTGTAATccagcctc > 2:726332/1‑136 (MQ=255) cGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCT‑TGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTGTTTTTTTAATCACAccgt > 1:570003/1‑141 (MQ=255) gCATTCTGCGCGCCTCCAACTCTACCTACAAACCCT‑TGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTGTTTTTTTACTCACACCttt > 1:38806/1‑143 (MQ=255) gCATTCTGCGCGCCTCCAACTCTACCTACAAACCCT‑TGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTGTTTTTTTAATCACACCttt < 1:522239/143‑1 (MQ=255) ttCTGCGCGCGTCCACCTCCACCTACAACCCCT‑TGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCACTTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTGTTTTTTTAATCACACCTTTATc < 2:804350/143‑1 (MQ=255) cggggggcTCCAGCTCTGCCTCCAATCCCT‑GGCCACGAGCGGGTGCGTGTGGTGAAGAGGTGATGGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTGTTTTTTTAATCACACCTTTATCCtt < 2:708759/136‑1 (MQ=255) cgcgcCTATAACTCTACCTAGAAACACT‑CGCCACAAGCGAGAGCGTTGGGTGAAGAGGTGATCGCCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTGTTTTTTTAATCACACCTTTATCCTTTc < 1:63732/143‑1 (MQ=255) gcCTCCAACTCTACCTACAAACCCT‑TGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTGTTTTTTTAATCACACCTTTATCCTTTCGCt < 1:228789/143‑1 (MQ=255) gcCTCCAACTCTACCTACAAACCCT‑TGCCACAAGCGGGTGCGCTTGGTGCACAGGTGATCGTCAATTCAGAATACTGACCGAGCGGGAGAGCGAGCAGAGCCCTCGACTGCTGTTCTCTTACTCACACCTTCATCCTTCCGCt > 2:861891/1‑143 (MQ=255) tCCAACTCTACCTACAAACCCT‑TGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGACTACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTGTTTTTTTACTCACACCTTTATCCTTTCGCTGTc > 1:302593/1‑143 (MQ=255) tCCAACTCTACCTACAAACCCT‑TGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTGTTTTTTTAATCACACCTTTATCCTTTCGCTGTc > 2:217816/1‑143 (MQ=255) tCCAACTCTAACTACAAACCCT‑TGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCATACACGAATGCTGTTTTGTTAATCGCAGCTTACTCATTTCGCtcgc > 2:43496/1‑140 (MQ=255) ccAACTCTACCTACAAACCCT‑TGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTGTTTTTTTAATCACACCTTTATCCTGTCGCTGTCt > 1:27058/1‑143 (MQ=255) gacgctacctacAAACCCT‑TGCCACAAGCGGGTGCGTTGGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTGTTTTTTTAATCACACCTTTATCCTTTCGCTGTCTtg < 1:874451/139‑1 (MQ=255) aaCTCTACCTACAAACCCT‑TGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTGTTGTTTTAATCACACCTTTATCCTTTCGcgggcgtg > 1:148274/1‑136 (MQ=255) aCTCTACCTACAAACCCT‑TGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTGTTTTTTTAATCACACCTTTATCCTTTCGCTGTCTtgc > 1:778321/1‑143 (MQ=255) ctacctacAAACCCT‑TGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCCGTTTTTTTAATCACACCTTTATCCTTCCGCTCTCTtgctgc > 1:602152/1‑143 (MQ=255) ctacctacAAACCCT‑TGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAACGCTGTTTTTTTAATCACACCGTTATCCTTTCGCTGGCTtgctgc > 2:374611/1‑143 (MQ=255) ctacAAACCCT‑TGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGCTGCTCTCCCGAATGCTGTTTTTTTAATCACACCTTTATCCTCTCGCTGTTTTGCGGCAAAc > 2:768917/1‑143 (MQ=255) ctacAAACCCT‑TGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTGTTTTTTTACTCACACCTTTATCCTTTCGCTGTCTTGCTGCAAAc > 1:303035/1‑143 (MQ=255) tgctggcccT‑TGGCAGACGCGGGTGCGTGTGGTGGAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTGTTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACt < 2:401910/137‑1 (MQ=255) aaaCCCT‑TGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTGTTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGag > 1:264436/1‑142 (MQ=255) cccT‑TGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTGTTTTTTTAATCACACCTTTATCCTTTCGCTTTCTCGCTGCAAACTGATTac > 2:658616/1‑142 (MQ=255) ccT‑TGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTGTTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGCTTAag > 1:94777/1‑143 (MQ=255) cT‑TGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTGTTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAaga < 2:559795/143‑1 (MQ=255) tGCCACACGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTGTTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAagaga < 1:627050/143‑1 (MQ=255) ccACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTGTTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGt < 1:53305/143‑1 (MQ=255) cacaAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTGTTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGtt > 1:612115/1‑143 (MQ=255) acaAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTGTTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGttt < 1:286103/143‑1 (MQ=255) gCGGGTTCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTGTTTTTTTAATCACTCCTTTATCCTTTCGCTGTCTTCCTTCCAACTGCTTAAGAGAGTTTTATc > 2:590786/1‑143 (MQ=255) gCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTGTTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTTATc < 2:794200/143‑1 (MQ=255) cGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTGTTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGAATAAGAGAGTTTTATCa > 1:743980/1‑143 (MQ=255) gggTGCGTTGGGAGAAGAGGTGATCGGCAATACGGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTGTTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTTATCaa < 1:814806/143‑1 (MQ=255) cgTGCGTTTGCTGAAGAGGTGATCGTCACTTCAGAATACTGTCAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTGTTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTTATCAAg < 2:680511/142‑1 (MQ=255) cGTGTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTGTTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTTATCAAGGagc < 2:566873/143‑1 (MQ=255) gTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTGTTTTTTTAATCACACCTTTATCCTTTCGCTGCCTTGCTGCAAACTGATTAAGAGAGTTTTATCAAGGagca < 1:653829/143‑1 (MQ=255) tttGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTGTTTTTTTAATCACACCTTTATCGTTTCGCTGTCTTGTTGCAAACTGACGAATATAGTGTTATCcagcagcag > 2:576727/1‑143 (MQ=255) tttGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTGTTTTTTCAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTTATCAAGGagcag > 1:659276/1‑143 (MQ=255) ttGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTGTTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTTATCAAGGagcagc > 1:709839/1‑143 (MQ=255) gTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTGTTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCaaa < 2:855470/110‑1 (MQ=255) aaGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTGTTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATGAAGAGAGTGTTATCAAGCACCAGCACAtgt > 2:566949/1‑143 (MQ=255) ggTGATCGTCAATTCAGAATACAAACAGGGGGGGAGAGCGTGCTCTGCGTCCGAATGCTGTTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTTATCAAGGAGCAGCACATGTGGTa < 1:790808/143‑1 (MQ=255) gTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTGTTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTTATCAAGGAGCAGCACATGTGGTAt > 1:418508/1‑143 (MQ=255) gTGATCGTCAATTCAGAATACGGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTGTTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTTATCATGGAGCAGCACATGTGGTAt < 1:519048/143‑1 (MQ=255) tGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTGTTTTTTTAATCACACCCTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGCGCTTTATCAAGGCGCAGCACATGTGGTATc > 2:105141/1‑143 (MQ=255) tCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTGTTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTTATCAAGGAGCGGCAGATGTGGGATCgaa > 1:278382/1‑143 (MQ=255) cgtgacttCAGAATACTGACAGTGCGGGAGAGCGTGATGATCGCGCCGATGCTGTTGTGTTAATCACACCTTCATCCGTTCGCTGTCTTGCTTCAAACTGATTAAGAGAGTTTTATCAAGGAGCAGCACATGTGGTATCaaaa < 2:624701/137‑1 (MQ=255) gttaaTTTAGAATACTGACAGAGCGGGGGAGCGTGATCCACTACCGTATTCTTTTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTTATCAAGGAGCAGCACATGTGGTATCAAAAg < 2:816321/140‑1 (MQ=255) gTCAATTCAGGATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTGTTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTTATCAAGGAGCAGCACATGTGGTATCAAAAg < 2:620993/143‑1 (MQ=255) gTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTGTTTTTTTAATCACACGTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTTATCAAGGAGCAGCACATGAGGTATCAAAAg > 1:379683/1‑143 (MQ=255) gTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTGTTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTTATCAAGTAGCAGCACATGTGGTATCAACAg > 2:356252/1‑143 (MQ=255) gTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTGTTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTTATCAAGGAGCAGCACATGTGGTATCAAAAg > 2:532520/1‑143 (MQ=255) tCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTGTTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTTATCAAGGAGCAGCACATGTGGTATCAAAAGa < 1:529879/143‑1 (MQ=255) tCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTGTTTTTTTAATCACACCTTTATACTTTCACTATCTTCCTGCAAACTGATTAAGCGAGATTTATCAAGGCGCAGCAACTGGGCTATAaaaaca > 2:732369/1‑141 (MQ=255) tCAATGCAGAATACTGGCAGAGCGGGAGCGCGTGCTGCTCTCCCGAATGCTGTTTTTTTAATCACACCTTTCTCCGTGCGCTTTCGTGCTGCAAACTGATTAAGAGAGTTTTATCAAGGAGCAGCACATGTGGTATCAAAAGa < 2:351965/143‑1 (MQ=255) cAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTGTTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTTATCAAGGAGCAGCACATGTGGTATCAAAAGAc > 1:179859/1‑143 (MQ=255) aaTTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTGTTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTTATCAAGGAGCAGCACATGTGGTATCAAAAGACg < 2:167154/143‑1 (MQ=255) ttCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTGTTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTTATCAAGGAGCAGCACATGTGGTATCAAAAGACGCt > 1:110086/1‑143 (MQ=255) ttCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTGTTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTCATCAAGGAGCCGCACATGTGGTATTAAAAGACGCt > 2:115366/1‑143 (MQ=255) ttCAGAATACTGACAGAGCGGGAGAGCGTGATGCGCTCCCGAATGCTGTTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTTATCAAGGAGCAGCACATGTGGTATCAAAAGACGCt < 1:376058/143‑1 (MQ=255) cAGCATACTGACAGAGCGGGAGAGCGTCATGCTCTCCCGAATGCTGTTTTTTTAATCACACCTTTATCCTGTCGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTTATCAAGGAGCAGCACATGTGGTATCAAAAGACGCTCa < 2:327559/143‑1 (MQ=255) aTACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAAGGCTGTGTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTTATCAAGGAGCAGCACATGTGGTATCAAAAGACGCTCAC‑GCt < 2:605247/143‑1 (MQ=255) aCTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTGTTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTTATCAAGGAGCAGCACATGTGGTATCAAAAGACGCTCAC‑GCTTa < 1:86038/143‑1 (MQ=255) cAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTGTTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTTATCAAGGAGCAGCACATGTGGTATCAAAAGACGCTCAC‑GCTTAGCGcc < 1:775391/143‑1 (MQ=255) cAGAGCGGGAGAGCGTGATGCTCCCCCGAATGCTGTTTTTTTAATCACACCTTTATCCCTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTTATCAAGGAGCAGCACATGTGGTATCAAAAGACGCTCAC‑GCTTAGCGcc < 1:321326/143‑1 (MQ=255) agagCGGGAGAGCGTGATGCTCTCCCGAATGCTGTTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTTATCAAGGAGCAGCACATGTGGTATCAAAAGACGCTCAC‑GCTTAGCGCCa > 1:568834/1‑143 (MQ=255) attcGGGAGAGCATCACGCTCTCCCGAATGCTGTTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTTCTCAAGAAGCAGACCAGCGGGTCTCAAAACACGCCCACAACTAAGCGCCa > 2:408108/4‑143 (MQ=255) ttcGGGAGAGCATCACGCTCTCCCGAATGCTGTTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTTATCAAGGAGCAGCACATGTGGTATCAAAAGACGCTCAC‑GCTTAGCGCCaaa > 1:150266/3‑143 (MQ=255) agCGGGAGAGCGTGATGCTCTCCCGAATGCTGTTTTTTTAATCACACCTTTATCTTTTCGTTGTCTTGCTGCAAACTGATTAAGAGAGTTTTATCAAGGAGTAGCACATGTAGTATCAAAATACGCTCAC‑GCTTAGCGCCaat > 1:293245/1‑142 (MQ=255) agCGGGAGAGCGTGATGCTCTCCCGAATGCTGTTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGCTTTATCAAGGAGCAGCACATGTGGTATCATAACAATGTCAC‑GCTTAGCGCCaaa > 2:811688/1‑143 (MQ=255) gggAGAGCATCACGCTCTCCCGAATGCTGTTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAACCTCATGAAGCGAGTTTTCTCGAGGCGCAGAACATTACGTAGCCAAAGACGCGCAC‑ACTGAGCCCCGAAtct > 2:111781/1‑143 (MQ=255) gagCGTGATGCTCTCCTGAATGCTGTTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGATGCCAACTGATTAAGAGAGTTTTATCAAGGCGCAGCACATGTTGTATCAAACGTCGCTCAC‑GCTTAGCGCCAAATCTCGTg < 2:465688/143‑1 (MQ=255) gagCGTGATGCTCTCCCGAATGCTGTTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTTATCAAGGAGCAGCACATGTGGTATCAAAAGACGCTCAC‑GCTTAGCGCCAAATCTCGTg > 1:693507/1‑143 (MQ=255) gagCGTGATGCTCTCCCGAATGCTGTTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTTATCAAGGAGCAGCACATGTGGTATCAAAAGACGCTCAC‑GCTTAGCGCCAAATCTCGTg < 1:217816/143‑1 (MQ=255) cGTGATGCTCTCCCGAATGCTGTTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTTATCAAGGAGCAGCACATGTGGTATCAAAAGACGCTCAC‑GCTTAGCGCCAGATCTCGGGGGt > 1:309570/1‑143 (MQ=255) gATGCTCTCCCGAATGCTGTTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGTAAACTGATTATTAGAGTTTTATCAAGTAGCAGCACATATGGTATCAAAAAACGTTTAC‑GCTTCACGCCAAATCTCGTGGCtttt > 2:780682/1‑142 (MQ=255) | TTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCT‑TGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGACAGAGCGGGAGAGCGTGATGCTCTCCCGAATGCTGTTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGAGTTTTATCAAGGAGCAGCACATGTGGTATCAAAAGACGCTCAC‑GCTTAGCGCCAAATCTCGTGGGTTTC > NC_000913/4270003‑4270286 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |