| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,377,792 | A→T | 5.4% | intergenic (‑70/+19) | blc ← / ← ampC | outer membrane lipoprotein Blc/beta‑lactamase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,377,792 | 0 | A | T | 5.4% | 267.7 / 2.6 | 104 | intergenic (‑70/+19) | blc/ampC | outer membrane lipoprotein Blc/beta‑lactamase |
| Reads supporting (aligned to +/- strand): ref base A (52/40); new base T (3/3); total (58/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.51e-01 | |||||||||||
Only 100 of 106 total aligned reads displayed.
GCGTAGGAGAACTGCAGGCAACGACCAGAAATGCAGCTGTCGCTGCGGCAACGAGAGGGAGCAGGCGCATAAATG‑TTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTTTTGTTTGCCAGCATCACGATACCCAGCTCTTTTTCTGGAATAAACGCGACATAGCTACCAAA > NC_000913/4377653‑4377933 | gcgTAGGAGAACTGCAGGCAACGACCAGAAATGCAGCTGTCGCTGCGGCAACGAGCGGGAGCAGGCGCATAAATG‑TTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTc < 1:70972/143‑1 (MQ=255)gcgTAGGAGAACGGCAGGCAACGACCAGAAATGCAGCTGTCGCTGCGGCAACGAGAGGGAGCAGGCGCATAACTG‑TTTCATTACTGGTTTTTTTCTAAGTGTGGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTc < 1:856182/143‑1 (MQ=255)gcgGAGGAGAACTGCAGGCAACGACCAGAAATGCAGCTGTCGCTGCGGCAACGAGAGGGAGCAGGCGCATAAATG‑TTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTc < 1:364557/143‑1 (MQ=255) tAGGAGAACTGCAGGCAACGACCAGAAATGCAGTTGTCGCTGCGGCAACGAGAGGGAGCAGGCGCATAAATG‑TGTCCTTACTGGTTTTTTTCTAAGCGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGa < 2:375613/143‑1 (MQ=255) tAGGAGAACTGCAGGCAACGACCAGAAATGCAGCTGTCGCTGCGGCAACGAGAGGGAGCAGGCGCATAAATG‑TTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGa < 1:538897/143‑1 (MQ=255) caGGAGAACTGCAGCGCACGACCAGACCTGCAGCTGTCGCTGCCGCACCGAGAGGGAGCAGGCGCATAAATG‑TTTCCGTACTGGTTTTTTTCTCAGCGTCGTAGACAGCAAGGAACAGCGGAGAAAAGGTCCGAAAATTCGGa < 2:484379/142‑1 (MQ=255) gagaACTGCAGGCAACGACCAGAAATGCAGCTGTCGCTGCGGCAACGAGAGGGAGCAGGCGCATAAATG‑TTTCCTTACTGGTTTTTTTCTAAGTGTAGCTGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGAccc > 2:753114/1‑143 (MQ=255) aggccTGCAGGCAACGACCAGAAATGCAGCTGTCGCTGCGGCAACGAGAGGGAGCAGGCGCATAAATG‑TTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAATTTTCGGAcctt < 2:800517/139‑3 (MQ=255) aggaCTGCTAGCAACGTCCAGAACTTCAGCTGTCGCTGCGGCAACCAGAGGGAGCAGGCGCATAAATG‑TTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAATTTTCGGAcctt < 2:509412/140‑3 (MQ=255) aaCTGCAGGCAACGACCAGAAATGCAGCTGTCGCTGCGGCAACGAGAGGGAGCAGGCGCATAAATG‑TTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGAt > 1:531859/1‑143 (MQ=255) aaCTGCAGGCAACGACCAGAAATGCAGCTGTCGCTGCGGCAACGAGAGGGAGCAGGCGCATAAATG‑TTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTACGAAAATTCGGAACCGAt > 2:403532/1‑143 (MQ=255) aCTGCAGGCAACGACCAGAAATGCAGCTGTCGCTGCGGCAACGAGAGGGAGCAGGCGCATAAATG‑TTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGACAAGCGGAGTAAAGGTCCGTAACTACGGCCCCGATg > 2:711946/1‑143 (MQ=255) tGCAGGCAACGACCAGAAATGCAGCTGTCGCTGCGGCAACGAGAGGGAGCAGGCGCATAAATG‑TTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGa > 1:615862/1‑143 (MQ=255) aGGCAACGACCAGAAATGCAGCTGTCGCTGCGGCAACGAGAGGGAGCAGGCGCATAAATG‑TTTCCTTACTGGTTTTTTTCTAATTGTAGATGACAGCAAGCAACAGCGTCGAAAGAGTACGAAAATTCGGAGCCGCTGGagct > 2:285928/1‑140 (MQ=255) gCAACGACCAGAAATGCAGCTGTCGCTGCGGCAACGAGAGGGAGCAGGCGCATAAATG‑TTTGCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAACGCGGAGAAAAGGTCCGACAATTCGGACCCGATGGactctg > 2:738365/1‑138 (MQ=255) cAACGACCAGAAATGCAGCTGTCGCTGCGGCAACGAGAGGGGACCGTGGATCGAATT‑TCTCATTACTGTGGTGAGGCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTa < 2:864353/143‑1 (MQ=255) cAACCACCAGAAATGCAGCTGTCGCTGCGGCAACGAGAGGGAGCAGGCGCATAAATG‑TTTCCTTACTGGGTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTa < 1:635514/143‑1 (MQ=255) aaCGACCAGAAATGCAGCTGTCGCTGCGGCAACGAGAGGGGGCAGGCGCATAAATG‑TTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTAc < 2:78968/143‑1 (MQ=255) cAGAAATGCAGCTGTCGCTGCGGCAACGAGAGGGAGCAGGCGCATAAATG‑TTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGTTCCGAAAATTCGGACCCGATGGAATTTTACTGTaga < 1:569782/143‑1 (MQ=255) cAGAAATGCAGCTGTCGCTGCGGCAACGAGAGGGAGCAGGCGCATAAATG‑TTTCCTTACTGGTTTTTTGCTAAGTGTAGATGACAGCAAGGAAAACCGGAGAAAACGTCCGGAAATTCGGACCCCATGGGACTGTACttgaac > 2:23861/1‑138 (MQ=255) aTGCAGCTGTCGCTGCGGCAACGAGAGGGAGCAGGCGCATAAATGATTACATTTATCG‑TTGGTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGtt < 1:881067/143‑1 (MQ=255) aTGCAGCTGTCGCTGCGGCAACGAGAGGGAGCAGGCGCATAAATG‑TTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGGAAATCCGGACCCGATGGAAGTTTACTGTAGAGCGtt > 2:550969/1‑143 (MQ=255) tGCAGCTGTCGCTGCGGCAACGAGAGGGAGCAGGCGCATAAATG‑TTTCCTTACTGGTTTTTTTCTAAGTGTAGATGAAAGCAAGGAAAAGCGGAGAGTAGGTCCGAAAATTCGGACCCGATGGAATTTTGCTGTAGAGCGTTa > 1:450763/1‑143 (MQ=255) gcggCTGTCGCTGCGGCAACGAGAGGGAGCAGGCGCATAAATG‑TTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTaa < 2:729958/140‑1 (MQ=255) aGCTGTCGCTGCGGCAACGAGAGGGAGCAGGCGCATAAATG‑TTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGa > 1:755739/1‑143 (MQ=255) ggtGTCGGTCCGGCAACCAGAGCGACCAGCCGCATAAATG‑TTTCCTTACTGGTTTTTTTCTAACGATAAATGACAGCAAAGAAAAGCTGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGaa < 1:865329/141‑1 (MQ=255) gCTGTCGCTGCGGCAAGGAGAGGGAGCAGGCGCATAACTG‑TTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGaa < 1:777844/143‑1 (MQ=255) cTGTGGCTGCGGCAACGTGAGGGAGCGGGCGCATAAATG‑TGTCCTTACTGGTTGTTTCATAAGTGTAGAGGACAGCAAGGAAAAGAGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAAt < 2:558460/143‑1 (MQ=255) cTGTCGCTGCGGCAACGAGAGGGAGCAGGCGCATAAATG‑TTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAGAAGCGGAGAAAAGGTCCGAAAATTCGGACACGATGGGATTTTACTGTAGAGAGTTAAGAAt > 1:420275/1‑143 (MQ=255) cTGTCGCTGCGGCAACGAGAGGGAGCAGGCGCATAAATG‑TTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAAt < 1:709181/143‑1 (MQ=255) tGTCGCTGCGGCAACGAGAGGGAGCAGGCGCATAAATG‑TTTCCTTACTGGTTTTTTTTTTTGTGTAGATGCCAGCAAGCAAAAGCGGAGAAACGTTCTGAAAATTCGGACCCGATGGATTCTCACACGCGAGCGTTAAGaagc > 2:573338/1‑141 (MQ=255) tCGCTGCGGCAACGAGAGGGAGCAGGCGCATAGATA‑TTGCCGGACGGGGTTTATTCTAAGTGTAAGTGACATGGAGGTGAAGCGGATATGATCTTCGTTATTGCGGACCCCATGGACTTTTACTGTAGAGACGTCAGAATCTg > 2:824160/1‑143 (MQ=255) tCGCTGCGGCAACGAGAGGGAGCAGGCGCATAAATG‑TTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTg > 1:308169/1‑143 (MQ=255) gCTGCGGCAACGAGAGGGAGCAGACGCATAAATG‑TTTCCTTACTGGGTTTTTTCCAAGTGGAGAAGACAGCAAGGAAAAGCGGAGAAAAGGGCCGAAACATCGGACCCGATGGAATGGCACTGTAGAGCGGTCAACATCTGcg > 2:258665/1‑142 (MQ=255) cTGCGGCAACGAGAGGGAGCAGGCGCATAAATG‑TTTCCTTACTGGTTGTTTTCTAAGTGTAGATGAAAGCAAGGAAAGGCGGAGAAAAGGTGCGAAAATTCGGACCCGAAGGACTTTTACTGTAGAGCGTTGAGAAGCGGCCa > 2:35918/1‑143 (MQ=255) cTGCGGCAACGAGAGGGAGCAGGCGCATAAATG‑TTTCCTTACTGGTCTTTTTCTAAGTGTAGATGACAGCAAAGAAAATCGGAGAAATGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCa > 2:818410/1‑143 (MQ=255) tGCGGCAACGAGAGGGAGCAGGCGCATAAATG‑TTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAg < 2:214324/143‑1 (MQ=255) tGCGGCAACGAGAGGGAGCAGGCGCATAAATG‑TTTCCTTACTGGGTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAg < 1:798786/143‑1 (MQ=255) cGGCAACGAGAGGGCGCAGGCGCATAAATG‑TTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAACGAAAAGCGGAGACAAGGTCCGAAAATTCGGACCCGATGGAATTTTACCGTAGAGCGGTCAGACTCTCCCCggc > 2:427944/1‑143 (MQ=255) gCAACGAGAGGGAGCAGGCGCATAAATG‑TTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGACTTTTACTGTAGAGCGTTAAGAATCTGCCAggcgg > 2:550399/1‑143 (MQ=255) cAACGAGAGGGCTCGGGCGCATAAATG‑TTTCCTTACTGGTTTTTTTCTAAGTGTAGATCACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCTGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAggcggc < 2:784478/143‑1 (MQ=255) cAACGAGAGGGAGCAGGCGCATAGATG‑TTTCCTTACTGGTTTTTTTCTCAGTGTAGATGACAGCGAGGAAAAGCGGAGGAAAGGGCCGAAAGTTCGGACCCGAAGGGATTTTACGGTAGGGCGTTAAGCATCTGCGAgggggg > 2:79559/1‑142 (MQ=255) cAACGAGAGGGAGCAGGCGCATAAATG‑TTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGGCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAggcggc > 1:395694/1‑143 (MQ=255) cAACCAGACGTACCAGGCGCATAAACG‑GCTACTTTCTGGGGGTTGCCTAAGTGTAGAGGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAggcggc < 1:29650/143‑1 (MQ=255) aaCGAGAGGGAGCAGGCGCATAAATG‑TTTCCTTACTGGTTTTTTTTTTTTTTTTTATGACAGCAAGGGCAAGCGGAGTACATGTTTGAGATTTTGGGCCCGATGGTATTTTACTTTTGAGCTTTCAGAAGCTGGCAGgcggcg > 2:455669/1‑143 (MQ=255) agagGGAGCAGGCGCATAAATG‑TTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGa < 1:543461/143‑1 (MQ=255) gAGCAGGCGCATAAATG‑TTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAATGTCCGAAAATTCGGACCGGATGGTGTATCCGTCGTGAGGGTTAAGACTCGGCCAGGCGGCGTCGACtctc > 1:196976/1‑143 (MQ=255) gCAGGCGCATAAATG‑TTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGCATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGc > 1:211070/1‑143 (MQ=255) cAGGCGCATAAATG‑TTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCt > 1:194867/1‑143 (MQ=255) cATAAATG‑TGCCCGTAGCTGTTTTTTTCTAAGGGTAGATGCCAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTg < 1:402607/143‑1 (MQ=255) tataTG‑TTTCCTTACGGGTTATTTTCACAGTGTAGATGACAGAAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGGCTCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTggg < 1:592105/140‑1 (MQ=255) tAAATG‑TTTCCTTACTGGTGTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCGGGATTggg > 1:224280/1‑143 (MQ=255) aaaTG‑TTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAACAGCGGAGAAAAGGTCCGAAAATTCGGCCACGATGGAATTTTACTGTAGAGCGTTAAGAATGTGCTCGGCGCCATCAACGCTGGATGGCTTgggg > 2:216498/1‑142 (MQ=255) g‑TTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGGAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCCGGATTGGGTTAGt > 1:889615/1‑143 (MQ=255) g‑TTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGCTGGAATTTTACTGTAGAGCGTTAAGAATGTGCCCGGCGGCGTCGCCTCTCGCTGGGTTGGGATAGt > 2:379086/1‑143 (MQ=255) tttCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGCGCGTTAAGCATCTGCCAGGCGGCGTCGCCTCTCGCTGGATTGGTCTAGtt > 1:480971/1‑143 (MQ=255) tttCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGtt > 1:472112/1‑143 (MQ=255) gttCCTTACTGGTTGGTGTGTAGGTGTAGATGACAGCAAGGAAACGCGTAGAAAAGGTCCGAAACTTCGGACCCGATGGAGTTTTGCTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGtt < 2:714798/142‑1 (MQ=255) cccTTACGGGTATTTTGCTACGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGCAAATTCGGTCCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGtttt < 1:660937/142‑1 (MQ=255) ccTTACTGGTTGGTTACTTAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAAGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGttttt < 1:548749/143‑1 (MQ=255) cTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCCGCGGGCATCGACTCTCGCTGGATTGGGATAGTTtttg > 1:686469/1‑143 (MQ=255) tgggtgttttCTAAGTGTCGATGGCAGCGAGGAAAAGCGGAGAAAAGGTCCGAAAAGTCGGCCCCGATGGAATTTAACCGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTTTTGTTTGc < 1:16660/137‑1 (MQ=255) tGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAATCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTCGGATAGCTTTTGTTTGc > 1:412799/1‑143 (MQ=255) tGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGTAAAGGTCCGAAAATTCGGACCCGATGGGCTTGTACTGTAGAGCGTTAAAAATCAGTGATGCTGCGTCGCCTCTCGCTGGATTGGGATAGTTTCTGTTTGc > 2:525445/1‑143 (MQ=255) tGGTTTTTTGCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTTTTGTTTGc < 1:3157/143‑1 (MQ=255) ctttttttCAAAGTGTAGCTGCCGCGAAGTATAAGCGGAGAAAACGGCCGAAACTTCGGAGCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTTTTGTTTGCCa < 2:599197/142‑1 (MQ=255) ttttttGTAAGTGTAGATGACAGCAAGGAAGAGCATAGAAAAGGTCCGACAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTTTTGTTTGCCAGc < 2:385688/143‑1 (MQ=255) tCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAGAATTCGTACCCGATGGAAGTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATCGTTTTTGTTTGCCAGCATccc > 2:796568/1‑141 (MQ=255) cTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTTTTGTTTGCCAGCATCACg < 1:343039/143‑1 (MQ=255) tAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACCGTAGAGCGGGAAGAAGCTGCCAGGCGGCGGCGACTCTCGCTGGATTGGGATAGTTTTTGTTTGCCAGCATGACGa > 1:884912/1‑143 (MQ=255) gaGTGGAGATGAGAGAAATGAAAGGTGGAGAAATGGTGCGACAGTGCGGACACGATGGAGTTTTACTGTAGAGCGTTAAGAATCTGTCAGGCGGCGTCGACTCTCGGTGGATTGGGATAGTTTTTGTTTGCCAGCATCACGAt < 2:115472/142‑1 (MQ=255) tgtAGATGAGAGCAAGCGACAGCGGAGAAAAGGTCCGAAGATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCGGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTTTTGTTTGCCAGCATCACGATAcc < 2:857187/143‑1 (MQ=255) gtAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTTTTGTTTGCCAGCATCACGATAccc < 1:762119/143‑1 (MQ=255) gATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGGTGGATTGGGATAGATTTTGTTTGCTAGCATCACGATCCCCAGc > 2:698156/1‑143 (MQ=255) gACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGCTTGGGATAGTTTAAAACGACCTGCATCGCGATACCCAGccct > 2:418950/1‑143 (MQ=255) aGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACGCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTTTTGTTTGCCAGCATCACGATACCCAGCTCtttt > 1:671806/1‑143 (MQ=255) aGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGCTTTTGTTTGCCAGCATCACGATACCCCGCTCcttt > 2:520569/1‑143 (MQ=255) aGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGGTAAGAAGCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTTTTGTTTGCCAGCATCACTATACCCAGCACtttt > 2:219820/1‑143 (MQ=255) gCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTGACTGTAGAGCGGTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTTTTGTTTGCCAGCATCACGATACCCAGCTCttttt < 2:653264/143‑1 (MQ=255) aaGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTTTTGTTTGCCAGCATCACGATACCCAGCTCTTTTTCt > 1:198515/1‑143 (MQ=255) ggAAAAGCGGAGAAAAGGGCCGAAAATTCGGCCCCGATGGTAGTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTTTTGTTTGCCAGCATCACGATACCCAGCTCTTTTTCTgg < 2:473926/143‑1 (MQ=255) gAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTTTTGTTTGCCAGCATCACGATACCCAGCTCTTTTTCTGGa > 2:331967/1‑143 (MQ=255) aaagGCGGAGAAAAGGTCCGAAATTTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTTTTGTTTGCCAGCATCACGATACCCAGCTCTTTTTCTGGaa < 2:56451/143‑1 (MQ=255) aaaaGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTTTTGTTTGCCAGCATCACGATACCCAGCTCTTTTTCTGGaa < 1:680872/143‑1 (MQ=255) gCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTTTTGTTTGCCAGCATCACGATACCCAGCTCTTTTTCTGGAATaaa > 1:135853/1‑143 (MQ=255) cGGTGAAAAGGTCCGAAAATTCGGACCTGATAGAATATTACTGTCGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTGTTTGTTTGCCAGCATCACGATACCCAGCTCTTTTTCTGGAATAAAc < 2:663706/143‑1 (MQ=255) gaAAAGGTCCGAAAAGTCGGGCCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTTTTGTTTGCCAGCATCACGATACCCAGCTCTTTTTCTGGAATAAACGCGa < 1:751958/143‑1 (MQ=255) gaAAAGGGCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTTTTGTTTGCCAGCATCACGATACCCAGCTCTTTTTCTGGAATAAACGCGa < 1:805914/143‑1 (MQ=255) tcgggTCCGAATTTTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGCTTGGGATAGTTTTTGTTTGCCAGCATCCCCATACCCAGCTCTTTTTCTGGCATACACGCGACa > 2:438262/4‑143 (MQ=255) aaGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTTTTGTTTGCCGTCATCACGATACCCATCTCTTTTTCTGTCGTAAACTCGActt > 2:141047/1‑141 (MQ=255) aaGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTTTTGTTTGCCAGCATCCCGATACCCAGCTCTTTTTCTGGGATAAACGCGACAt > 1:298069/1‑143 (MQ=255) aaGGTCCGAAAATTCGGACCCGATGGAATTTCACTGTAGAGCGTTAAGAATCTGCCAGGCGGCATCGTCTATCGCTGGATTGGGATAGTCTTTGTTTGCCAGCATCACGATACCCAGCTCTTTTCCGGGAATAAACGCGAGAt > 1:795128/1‑143 (MQ=255) tCCGCAAACTCGGACCCGATGGAATTTTCCTGTGGGGCGTTAAGAATCGGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTTTTGTTTGCCAGCATCACGATACCCAGCTCTTTTTCTGGAATAAACGCGACATAGCt < 2:240478/143‑1 (MQ=255) cGAAAATTCGGACCCGATGGAATTTTCCTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTTTTGTTTGCCAGCATCACGCTACCCAGCTCTTTTTTTGGATTAACCGCGACCTCGCTag > 2:587780/1‑142 (MQ=255) cGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTTTTGTTTGCCAGCCTCCCGATACCCACCACTTTTTCTGGGCTAAACGCGACATAGCTAc > 1:685707/1‑143 (MQ=255) cGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTTTTGTTTGCCAGCATCACGATACCCAGCTCTTTTTCTGGACTAAACGCGACATGGCTAc > 2:551604/1‑143 (MQ=255) gAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTTTTGTTTGCCAGCATCACGATACGCAGCTCTTTTTCTGGAATAAACGCGACATAGCTAcc > 1:494027/1‑143 (MQ=255) gAAAATTCGGACCAGATGGAATTTAACTGTAGAGCGTTAAGAATCTGCCACGCAGAATAGACTCTCGCTGGATTGGGAGAGATATTGTTTGCCAGCATCACGGTACACAGCTCGTTTTCTGGAATACACCCCACAtcacgaac > 2:502815/1‑136 (MQ=255) aaaTTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTTTTGTTTGTTCGCATCACGATATCCGGCTCTTTTTTTGGATTAAACGCTACATAGCTAccga > 2:839924/1‑141 (MQ=255) aaTTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTTTTGTTTGCCAGCATCACGATACCCAGCTCTTTTTCTGGAATAAACGCGACATAGCTACCaaa < 1:722410/143‑1 (MQ=255) | GCGTAGGAGAACTGCAGGCAACGACCAGAAATGCAGCTGTCGCTGCGGCAACGAGAGGGAGCAGGCGCATAAATG‑TTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTTTTGTTTGCCAGCATCACGATACCCAGCTCTTTTTCTGGAATAAACGCGACATAGCTACCAAA > NC_000913/4377653‑4377933 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |