BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1463445	83 (3.140)	5 (0.200)	4/250	NT	5.8%	intergenic (+7/‑94)	paaK/paaX	phenylacetate‑CoA ligase/DNA‑binding transcriptional repressor PaaX
*	?	NC_000913	= 1463482	85 (3.400)	5 (0.200)	4/250	NT	5.8%	intergenic (+44/‑57)	paaK/paaX	phenylacetate‑CoA ligase/DNA‑binding transcriptional repressor PaaX

Only 100 of 105 total aligned reads displayed.

ATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGCTGTTCCGGTCAGTGGCACATCTTTGATCTCCTCTCTGTATGGTGA  >  NC_000913/1463340‑1463624

ttctcTACCGCTGTGACGATCGTTAACTGTCGCAGTATCCCGCGTCCAGAACGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGt                                                                                                                                                <  1:427771/142‑1 (MQ=255)

aTCTCTACCGATGTGATGATCGTTAACTGTGGCAGTCCCCCGCGTTCGGAAGGCAAGGCGTGTCGGGTGTGTGATCGGCGCAATATGGTTGGTGCCTGACGTATCGTCTGGCACTGGGGGGGGAAAGCGCGAGGGCCAGAGGt                                                                                                                                                >  2:131468/1‑143 (MQ=255)

  ctctACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTcg                                                                                                                                              >  1:363898‑M2/1‑141 (MQ=255)

   tctACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTGTGGACGTGGTGGGGTAAAGCGCCAGGGCGAGAAGTcga                                                                                                                                             <  1:138376‑M2/143‑4 (MQ=255)

   tctACCGATGTGAGGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTcga                                                                                                                                             >  1:324174‑M2/1‑140 (MQ=255)

     cacCGATGTGATGATCGTTAACTGGGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTcgata                                                                                                                                           >  1:421666‑M2/2‑138 (MQ=255)

      aCCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGGGTCGGGTGGTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTcgatac                                                                                                                                          >  1:148740‑M2/1‑137 (MQ=255)

        cGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGCTCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGCAGTCGATACGa                                                                                                                                        >  2:508233/1‑143 (MQ=255)

        cGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGa                                                                                                                                        <  1:310772/143‑1 (MQ=255)

        cGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGa                                                                                                                                        <  1:463413/143‑1 (MQ=255)

             tgatgaTCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCtgt                                                                                                                                   <  2:172774/143‑1 (MQ=255)

                 gatCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTa                                                                                                                               >  1:141710/1‑143 (MQ=255)

                  gtCGTTAACTGTGGCTGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGGATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTAt                                                                                                                              <  2:325096/142‑1 (MQ=255)

                     gTTCACTGTGGCAGAATCCCGCCTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCGGACGTACCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGAt                                                                                                                           <  1:111484/143‑1 (MQ=255)

                     gTTACCTGTGGCAGTATCCCGGGTTCAGAAGGCAAGGCGTGTCGGGTGTTGGATCTGCGCAAGATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGAt                                                                                                                           <  2:235727/143‑1 (MQ=255)

                       tAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAGTATTGTTGGTGCCTGACGTATCGTCTGGCGCTGGTGGGGTCAAGCGCCAGGGCCAGAAGTCGCTACGACCTGTGATATGATTc                                                                                                                         >  1:131009/1‑143 (MQ=255)

                           gggggCAGCAGCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCGGCGCAATATTGTTGGTGCCTGAAGCATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGGCAGAAGTCGATACGACCTGTGCTATGATTCATaa                                                                                                                     <  1:187370/140‑1 (MQ=255)

                              ggCAGTATCCCGCGTTCAGAAGGCGAGGCGTGAAGTTCAGTTGATGTGCGCAATATTGTTGGTGCCGGACGTGTCCTTGGTCCCGGGGGTGGTAAAGCGCCAGGGGCAGAGGTCGGCACGACCTGTGCTATGAGTCAGAAATc                                                                                                                  >  2:480626/1‑143 (MQ=255)

                               gCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTATGATCTGCGCAATATTGTTGGTGCCTGACGGATCGTCTGGCCCTGGAGGGGTAAAGCGCCAGGGCCAGAAGTCGGTACGACCTGTGCGAGGACTCATAAATca                                                                                                                 >  2:29684/1‑143 (MQ=255)

                               gCAGGATCCCGCGCGGAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTAGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATca                                                                                                                 <  2:478121/143‑1 (MQ=255)

                                cAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATcac                                                                                                                >  1:170674/1‑143 (MQ=255)

                                cAGTATCCCGCGGTCAGAGGGCAGGGGGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATcac                                                                                                                <  2:490836/143‑1 (MQ=255)

                                  gTAGCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAGTATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCacaa                                                                                                              <  2:479401/143‑1 (MQ=255)

                                   tagccggcgTGCAGGAGGCAAGGCGTGTCGGGTGTTGGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCacaac                                                                                                             <  2:421519/137‑1 (MQ=255)

                                   gaTCCCGCGTTCAGAAGGCAAGGCGTGCCGGGTCGTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCGTGGTGGGGTAAAGCGCCAGAGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCacaac                                                                                                             <  1:200969/142‑1 (MQ=255)

                                    aTCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCacaacc                                                                                                            <  1:327715/143‑2 (MQ=255)

                                     tCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATACATCAcaacaa                                                                                                           >  2:220462/1‑143 (MQ=255)

                                       ccGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGGCGATACGACCTGTGCTATGAAACAAAAATCACAACAATa                                                                                                         >  1:388755/1‑143 (MQ=255)

                                        cgcgTTCAGAAGGCAAGCCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTTGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATaa                                                                                                        <  1:399645/143‑1 (MQ=255)

                                         gcgTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATaac                                                                                                       <  1:413060/143‑1 (MQ=255)

                                           ggtCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCGAGATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATaacaa                                                                                                     <  2:197763/141‑1 (MQ=255)

                                           gTTGAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATaacaa                                                                                                     <  1:442387/143‑1 (MQ=255)

                                           gTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAGTATTGTTGGTGCCTGACGTATCGTCTGGCCGTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGGGCTATGATTCATAAATCACAACAATaacca                                                                                                     >  2:174113/1‑141 (MQ=255)

                                             tCAGAAGGCAGGGCGTGTCGTGTGTTCGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAacaaca                                                                                                   <  1:198719/143‑1 (MQ=255)

                                               aGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGATGGTGCCTGAGGTATCGTAAGGACCAGGTGAGATAAAGAGCGAGAGACAGAAGTCGATACGACATGTGCGAAGAATAATAAATCAAAAAAATAAAAACAGa                                                                                                 >  2:256312/1‑143 (MQ=255)

                                                         gcGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTAGCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGAGTCATAAATCACAACAATAACAACAGACTGCAGCGaa                                                                                       >  2:69042/1‑143 (MQ=255)

                                                            tgtCGGGGGTTTCTTAAGCGCCACATTTTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGa                                                                                    <  1:92197/143‑1 (MQ=255)

                                                              tCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATACCACCAGACAGAAGCCAATGAGt                                                                                  >  2:200851/1‑143 (MQ=255)

                                                                  gtgtTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAAc                                                                              <  2:354205/143‑1 (MQ=255)

                                                                    gtTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTACAGCGCCCGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGACGCGACTGAGTAAAAtt                                                                            >  2:495217/1‑143 (MQ=255)

                                                                     tttGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTg                                                                           >  1:501388/1‑143 (MQ=255)

                                                                      ttGATCTGCGCAATATTGTTGGTGCCGGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGa                                                                          <  1:4023/143‑1 (MQ=255)

                                                                        gATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATa                                                                        >  1:26921/1‑143 (MQ=255)

                                                                         aTCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAGTCACAAGAATAACAACAGAGTGAGGCGAGTGAGTAAACTTGATAc                                                                       >  1:14175/1‑143 (MQ=255)

                                                                          tCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACCACAGACTGAAGCGACTGAGTAAACTTGATACt                                                                      >  2:35981/1‑143 (MQ=255)

                                                                            tGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACttt                                                                    >  1:332165/1‑143 (MQ=255)

                                                                              cgcAATGTTGTGGGTGCCTGACGTAGCGTCTGGCCCTGTTGGGGCAAAGCGCCAGTGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAACCTTGATACTTTTa                                                                  <  2:302576/143‑1 (MQ=255)

                                                                              cgcAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATCCTTTTa                                                                  >  2:488436/1‑143 (MQ=255)

                                                                              cgcAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTCATACTCTTa                                                                  >  2:477152/1‑143 (MQ=255)

                                                                              cgcAATATTGTTGGTGCCTGACGTACCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTa                                                                  <  1:91260/143‑1 (MQ=255)

                                                                                cAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATCACACCAGCCTGAAGCGAATGAGTAAACTTGATACTTTGAta                                                                >  2:1052/1‑142 (MQ=255)

                                                                                cAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATc                                                                >  1:226532/1‑143 (MQ=255)

                                                                                cAAGATTGTTGGTGCCTGACGTCTCGTCCGGCCCTGGTGGGTTAAAGCGCCAGGCCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATc                                                                <  1:111384/143‑1 (MQ=255)

                                                                                        ttgGGGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGAGTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGc                                                        <  2:487200/143‑1 (MQ=255)

                                                                                           ggaccTCACGTATCGGCGGCCCCTGGTGGGGTAAAGCGCCAGGGACAGAAGTCGATACGACCTGTGCTATGAGTCATAAATCACAACAATAACAACAGACGGAAGCGAATGAGTAAACTTGATACTGTGATCCAACATGCTGt                                                     <  1:158664/140‑1 (MQ=255)

                                                                                           gTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGt                                                     >  2:251022/1‑143 (MQ=255)

                                                                                            tggcTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTa                                                    <  2:301866/140‑1 (MQ=255)

                                                                                              ccTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGACGCGAATGAGTCAACTTGATACTTTTATCCACCCCGCTGTaaa                                                  >  1:185953/1‑143 (MQ=255)

                                                                                               cggACGTATCGTCTGGCCCTGGTGGGGTAAAGCACCAGGGCCAGAAGGCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAAc                                                 <  2:83564/141‑1 (MQ=255)

                                                                                                tGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTcgatacgtcaggcaccaacaatattgcgcagatcaaacacccgacacgccttgccttctgaacgcgggatactgccacagttaacgatcatcacat                                                <  1:421760‑M2/143‑97 (MQ=255)

                                                                                                  aCGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGAGTGAGGGGGGGGAGGAAACTTGATACGTTTATCCAACATGCTGTAAACGCt                                              >  1:235413/1‑143 (MQ=255)

                                                                                                    gTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGCTGt                                            >  1:286322/1‑143 (MQ=255)

                                                                                                      aTCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGGTTCATAAATCATAACAATAACAACAGACTGATGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGCTGTTc                                          >  1:182751/1‑143 (MQ=255)

                                                                                                       tCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGtacgtcaggcaccaacaatattgcgcagatcaaacacccgacacgccttgccttctgaacgcgggatactgccacagttaacgatcatcacatcggtagagat                                          <  1:486848‑M2/143‑104 (MQ=255)

                                                                                                       tCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGCTGTTcc                                         >  2:13908/1‑143 (MQ=255)

                                                                                                       tCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACCCTGTTcc                                         >  2:60468/1‑143 (MQ=255)

                                                                                                         gTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTCCTATGATTCATAAATCACAACAATAACAACAGACTGAAGAGAATGAGTAAACTTGATACTTTTATCCACCCTGACGTAAACGCTGTTCAgg                                       >  2:82833/1‑143 (MQ=255)

                                                                                                           cTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGCAGTTCCggcc                                     >  2:292233/1‑141 (MQ=255)

                                                                                                              gCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTcgatacgtcaggcaccaacaatattgcgcagatcaaacacccgacacgccttgcattctgaacgcgggatactgccaccgttaacgatcaacacatcggtagagatcccc                                  <  2:319367‑M2/143‑111 (MQ=255)

                                                                                                               cccTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGCTGTTCCGGTCAGTg                                 <  1:338863/143‑1 (MQ=255)

                                                                                                                ccTGGTGGGGTAAAGCGCCAGGGCCAGAAGTcgatacgacaggcaccaacaatattgcgcagatcaaacacccgacacgccttgccttctgaacgcgggatactgccacagttaacgagcatcacatcggtcgagatccacac                                <  1:14872‑M2/143‑113 (MQ=255)

                                                                                                                ccTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGCCTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATCCTGTAAACGCTGTTTCGGACAGTgg                                >  2:467308/1‑143 (MQ=255)

                                                                                                                ccTGGTGGGGTAAAGCGCCAGGGCCAGA‑‑gatacgtcaggcaccaacaatattgcgcagatcaaacacccgacacgccttgccttctgaacgcgggatactgccacagttaacgatcatcacatcggtagagatgcccaccat                               <  1:515157‑M2/143‑115 (MQ=255)

                                                                                                                 cTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCCCCGTGCTGGAACCGCCGCTCCGCTCCGTGGc                               >  2:177233/1‑143 (MQ=255)

                                                                                                                  tggtggGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGCTGTTCCGGTCAGTGGca                              >  2:348008/1‑143 (MQ=255)

                                                                                                                    gtggGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGCTGTTCCGGTCAGTGGcaca                            >  1:305043/1‑143 (MQ=255)

                                                                                                                       gggTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGCTGTTCCGGTCAGTGGCACctct                         >  2:490623/1‑143 (MQ=255)

                                                                                                                        ggTAAAGCGCCAGGGCCAGAAGTCGATACGACCCGTGCTATGCTTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTAGCCAACATGCGCTAAACGCCCCTCCCGGCAGCGACACATCtt                        >  2:487717/1‑143 (MQ=255)

                                                                                                                         gTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACATTTATCCAACAAGCTGTAAACGCTGCTCCGGTCAGTGGCACATCttt                       >  2:114892/1‑143 (MQ=255)

                                                                                                                          tAAAGCGCCAGGGCCAGCAGTGGATACGACCTGTGCTATGATGCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGCTGTTCCGGTCAGTGGCACATCTTTg                      <  1:471129/143‑1 (MQ=255)

                                                                                                                           aaaGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGACTCATAAATCCCAACAATAACAACAGACTGAAGCGAATGAGTAACCTTGATACTTTTATCCAACATGCTGTAACCGCTGTTCCGGTCACTGGCACACCtttca                     >  2:34094/1‑141 (MQ=255)

                                                                                                                            aaGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACCGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGCTGTTCCGGTCAGTGGCACATCTTTgct                    >  2:238397/1‑141 (MQ=255)

                                                                                                                            aaGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTGTTATCCAACATGCTGTAAACGCTGTTCCGGTAAGAGGCACATCTTTGAt                    >  2:414266/1‑143 (MQ=255)

                                                                                                                                gcCAGGGTCAGAAATCGATAAAACCTGTGCTATGAATCATAAATCACACCAATAACAACAGACTAAAGCGATTGCGTAAACTTGATACTTTTATCCAACATGCTATAAACACTGTTCCGGTCAGTGGCAAATCTTTGACctcc                >  2:51391/1‑143 (MQ=255)

                                                                                                                                  cAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCAGAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGCGGTTCCGGTCAGTGGCACATCCTTGATatcctc              >  1:194601/1‑143 (MQ=255)

                                                                                                                                  cAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGCTGTTCCGGTCAGTGGCACATCTTTGATctcctc              >  1:431049/1‑143 (MQ=255)

                                                                                                                                  cAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGCTGTTCCGGTCAGTGGCACATCTTTGATctcctc              <  1:88017/143‑1 (MQ=255)

                                                                                                                                   aGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAGATCACAACAATAACAACAGACTGCAGAGAATGAGTAAACTTGATACTTTTATCCAACATGCAGTAAACGCTGTTCCGATCAGTGGCACATCTTTGATCTCctct             >  2:365455/1‑143 (MQ=255)

                                                                                                                                   aGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAGCGCTGTTCCGGTCAGTGGCACATGTTTGATgtcctcg             >  1:512589/1‑142 (MQ=255)

                                                                                                                                   aGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGCTGTTCCGGTCAGTGGCACATCTTTGATCTCctct             <  1:67353/143‑1 (MQ=255)

                                                                                                                                   aGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAAGGAGGAAACTTGATACTTTTATCCAACATGCTGTAAACGCTGTTCCGGTCAGTGGCACATCTTTGATCACctct             >  2:109608/1‑143 (MQ=255)

                                                                                                                                     ggCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGCTGTTCCGGTCAGTGGCACATCTTTGATCTCctctct           <  2:296493/143‑1 (MQ=255)

                                                                                                                                     ggCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTAGCCAACATGCTGTAAACGCTGTTCCGGTCAGTGGCACATCTTTGATCTCctctct           <  1:2217/143‑1 (MQ=255)

                                                                                                                                      gtcAGAAGACGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGCTGTTCCGGTCAGTGGCACATCTTTGATCTCCTCTCTg          <  2:346037/141‑1 (MQ=255)

                                                                                                                                      gCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGCTGTTCCGGTCAGTGGCACATATTTTATCTCctctcac          >  2:82610/1‑141 (MQ=255)

                                                                                                                                          gAAGTCGATACGACCTGTGCTATGATTCATAAATCACTACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATACAACATGCTGTAAACGCTGTTCCGTTCGGTGGCACATCTTTGATCTCCTCTCTGTacg      >  2:369278/1‑141 (MQ=255)

                                                                                                                                              tCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGCTGTTCCGGTCAGTGGCACATCTTTGATCTTCTCTCTGTAGGGGGa  >  2:153504/1‑143 (MQ=255)

                                                                                                                                              tCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGCTGTTCCGGTCAGTGGCACATCTTTGATCTCCTCTCTGTATGGTGa  >  1:179454/1‑143 (MQ=255)

                                                                                                                                              tCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGCTGTTCCGGTCAGTGGCACATCTTTGATCTCCTCTCTGTATGGTGa  >  2:442595/1‑143 (MQ=255)

                                                                                                                                              tCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGCTGTTCCGATCACTGGCACATCTTTGATCTCCTCTCTGTAGGGTGa  >  2:352896/1‑143 (MQ=255)

ATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGCTGTTCCGGTCAGTGGCACATCTTTGATCTCCTCTCTGTATGGTGA  >  NC_000913/1463340‑1463624

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 8 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.