| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,441,833 | G→C | 5.3% | intergenic (‑90/+21) | hslJ ← / ← ldhA | lipoprotein implicated in Novobiocin resistance/D‑lactate dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,441,833 | 0 | G | C | 5.3% | 343.7 / 9.3 | 127 | intergenic (‑90/+21) | hslJ/ldhA | lipoprotein implicated in Novobiocin resistance/D‑lactate dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base G (53/66); new base C (4/3); total (58/69) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.00e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.36e-01 | |||||||||||
Only 100 of 129 total aligned reads displayed.
CACATCCCGCCATCAGCAGGCTTAGCGCAACAAACGCGGCTACTTTCTTCATTGTGGTTCTCAATTACAGTTTCTGACTCAGGACTATTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGTGCCCGGTAAACAG > NC_000913/1441692‑1441973 | cacaTCCCGCCATCAGCAGGCGTAGCGCAACAAACGCGGCTACTTTCTTCATTGTGGTTCTCAATTACAGTTTCTGACTCAGGACTATTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGa < 1:239386/143‑1 (MQ=255) accgcccGCCATCAGCACGCTTAGCGCAACAAACGCGGCTACTTTCTTCATTGTGGTTCTCAATTACAGTTTCTGACTCAGGACTATTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGaa < 1:48941/139‑1 (MQ=255) aTCCCGCCATCAGCAGGCTTAGCGCAACAAACGCGGCTACTTTCTTCATTGTGGTTCTCAATTACAGTTTCTGACTCAGGACTATTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATg > 1:402537/1‑143 (MQ=255) aTCCCGCCATCAGCAGGCTTAGCGCAACAAACGCGGCTACTTTCTTCATTGTGGTTCTCAATTACAGTTTCTGACTCAGGACTATTTTAAGAATAGAGGATCAACCGACATACGAGATTATCTGAATCAGCTCCCATAGAATg > 2:456289/1‑143 (MQ=255) tcGCCATGAGCAGGCTTAGCGCCACGAACGCTGCTACTTTCTTCGTTGTGGTTCTCAATTACAGTTTCTGACTCAGGACTAGTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAg < 1:147114/142‑1 (MQ=255) cGCCATCAGCAGGCTTAGCGCAACAAACGCGGCTACTTTCTTCATTGTTGTTCTCAATTACAGTTTCTGACTCAGGACTATTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAgg < 2:123496/143‑1 (MQ=255) cGCCATCAGCAGGCTTAGCGCAACAAACGCGGCTACTTTCTTCATTGTGGTTCTCAATTACAGTTTCTGACTCAGGACTATTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAgg > 2:310601/1‑143 (MQ=255) gCCATCAGCAGGATTAGAGCAACAAACGCGGCTACTTTCTACATTGAGGATCTCAATTACAGATTCTGACTCAGGACTATTTTAAGAATAGAGGATGAAGGGTCGTAGGGGATTATCTGAATCAGATGCCCTGGAATGCAggg > 2:296740/1‑143 (MQ=255) aTCAGCAGGCTTAGCGCAACAAACGCGGCTACTTTCTTCATTGTGGTTCTCAATTACAGTTTCTGACTCAGGACTATTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGCATTCCAGGGGAg < 2:354687/143‑1 (MQ=255) cagcatGCTTAGCGGAACAACAGCGGCTACTTTCTGCATTGTGGTTCTCAATTACAGGTGCTGACTCAGGACTATTTTAAGAATAGAGGATCAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCg < 2:353800/143‑1 (MQ=255) cagcagGCTTAGCGCAACAAACGCGGCTACTTTCTTCATTGTGGTTCTCAATTACAGTTTCTGACTCAGGACTATTTTAAGAATAGAGGATGAAAGGTCATTGGGTATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCg < 1:390601/143‑1 (MQ=255) cagcagGCTTAGCGCAACAAACGCGGCTACTTTCTTCATTGTGGTTCTCAATTACAGTTTCTGACTCAGGACTATTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCg < 1:255325/143‑1 (MQ=255) agcagGCTTAGCGCAACAAACGCGGCTACTTTCTTCATTGTGCTTCTCAATTACAGTTTCTGACTCATGACTATTTTAAGAATAGAGGATGAAAGGTCCTTGGTGCTTATCTGAATCAGATCACCTCGAATTCAGGGTAGCga > 2:127907/1‑142 (MQ=255) gcagGCTTAGCGCAACAAACGCGGCTACTTTCTTCATTGTGGTTCTCAATTACAGTTTCTGACTCAGGACTATTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAAAGCGCGCACCTGGACTGCAGGGGAGCGGc > 2:405491/1‑143 (MQ=255) gcagGCTTAGCGCAACAAACGCGGCTACTTTCTTCATTGTGGTTCTCAAGTACAGGTTCTGACTCAGGACTATTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGCATTCCAGGGGAGctga < 1:158440/143‑4 (MQ=255) agGCTGAGCGCAACAAACGCGGCTACTTTCTTCGTTGTGGTTCTCAATTACAGTTTCTGACTCAGGACTATTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCaa < 2:268335/143‑1 (MQ=255) ggCTTAGCGCAACAAACGCGGCTACTTTCTTCATTGTGGTTCTCAATTACAGTTTCTGACTCAGGACTATTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAg < 1:381409/143‑1 (MQ=255) gCTTAGCGCAACAAACGCGGCTTCTTTCTTCATTGTGGTTCTCAATTACAGTTTCTGACTCAGGACTATTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGa < 2:45777/143‑1 (MQ=255) cTTAGCGCAACAAACGCGGCTACTTTCTTCATTGTGGTTCTCAATTACAGTTTCTGACTCAGGACTATTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGAt > 1:230909/1‑143 (MQ=255) tAGCGCAACAAACGCGGCTACTTTCTTCATTGTGGTTCTCAATTACAGTTTCTGACTCAGGACTATTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTa > 2:71131/1‑143 (MQ=255) gcgcAACAAACGCGGCTACTTTCTTCATTGTGGTTCTCAATTACAGTTTCTGACTCAGGACTATTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTaaa < 1:423676/143‑1 (MQ=255) cgcAACTAACGCGGTGACTTCCTTCATGTTGGTTCTCAATTACAGTTTCTTACTCAGGACTATTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCTCTGGAATGCAGGGGAGCGGCAAGATTAAAc < 2:246766/143‑1 (MQ=255) cgcAACAAACGCGGCTACTGTCTTCATTGTGGGTCTCAATTACAGTTTCTGACTCAGGACTATTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAAc < 1:204586/143‑1 (MQ=255) acacacTCGGCTACTTTCTTTATTGTGGTTCTCAATTACAGTTTCTGACTCAGGACTATTTTAAGAATAGATGATGAAAGGTCCTTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGTAGCGGCAAGATTAAACCAgt < 2:130857/143‑1 (MQ=255) acaaACGCGGCTACTTTCTTCATTGTGGTTCTCAATTACAGTTTCTGACTCAGGACTATTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGTATGCAGGGGCGCGGCAAGATTAAACCAgt > 1:158896/1‑143 (MQ=255) acaaACGCGGCTACTTTCTTCATTGTGGTTCTCAATTACAGTTTCTGACTCAGGACTATTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAAATCCGATTAAGAGCAGAGGAGCGGCAAGATTAAACCAgt > 1:15578/1‑143 (MQ=255) aaaCGCGGCTACTTTCTTCATTGTGGTGCTCAATTACAGTTTCTGACTTAGGACTATTTTAAGAACAGAGGATGAATGGTCATTGGGGATTATCTGAATCAGCTCTGCTGGAATGCAGGGGAGCGGCAAGATTAAACCAgttc < 2:172142/143‑1 (MQ=255) ggatACTTTCATCATTGTGGTTCTCAATTACAGTTTCTGACTCAGGACTATTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCgg < 1:119443/140‑1 (MQ=255) tttCTTCATTGTGGTTCTCAATTACAGTTTCTGACTCAGGACTATTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCCGGt > 1:4744/1‑143 (MQ=255) tcttcATTGTGGTTCTCAATTACAGTTTCTGACTCAGGACTATTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGCGCGGCAAGATTAAACCAGTTCGTTCGGGTAGGttt > 1:208991/1‑143 (MQ=255) tccttGTGGTGCTCAATTACAGTTTCTGACTCAGGACTATTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGc < 2:50345/140‑1 (MQ=255) tcATTGTGGTTCTCCATTACAGTTTCTGACTCAGGACTATTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCCTGAATGCAGCGGTGCGGCAAGGTTAAACCAGTTCGTTCGGGCAGGTTTCGc < 2:230167/143‑1 (MQ=255) ccgttGTAGTTCGCAATTATAGTTTCTCACTCAGGATTATGTTAAGAATAGAGGATGAAAGGTAATTGGGGATTATCTGTATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGc < 2:417703/140‑1 (MQ=255) cgctgtgGTTCTCAGTGACAGGTTCTGGCGCGGGACTATTTTGAGAATAGAGGATGAAAGGTCATTGGTGATTACCTGTATCAGCTCCCCCGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGcc < 2:337970/140‑1 (MQ=255) tgtgGTTCTCAATTACAGTTTCTGACTCAGGACTATTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCttt < 1:326181/143‑1 (MQ=255) tgGTTCTCAATTACAGTTTCTGACTCAGTACTATTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGGATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCttttt < 1:205042/143‑1 (MQ=255) ggTTCTCAATTACAGTTTCTGACTCAGGACTATTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCCAGATTCAACCAGTTCGTCCGGGCAGGTTTCGCCTCTTTc > 2:467150/1‑143 (MQ=255) gTTCTCAATTACAGTTTCTGACTCAGGACTATTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCATCTGCCCTGGGTTGTAGACAAGCACCAAGATTAAACCAGTTCGTTCTGGGTGGTTTCGTTGTTTTcc > 1:446579/1‑143 (MQ=255) ttCTCAATTACAGTTTCTGACTCAGGACTATTTTAAGAATAGAGGATGAAAGGTCATTGGGGCTTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTCCGGGCAGGTTTCGCCTTTTTccc > 2:124938/1‑142 (MQ=255) ctcAATTACAGTTTCTGACTCAGGACTATTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGa > 2:15373/1‑143 (MQ=255) ccaaaTTACAGTTTCGGTCTCAGGACTTTAATCTCTGTAGAGGATTTAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGa < 2:225118/140‑1 (MQ=255) tACAGTCTCTGACTCAGGACTAGTTTAATAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCtt < 2:147028/143‑1 (MQ=255) caCAGGTTCTGACTCAGGACTATTTTAAGAATAGAGGATGAATGGTCATTGCGGATTATACGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCtt < 1:196560/142‑1 (MQ=255) aGTTTCTGACTCAGGACTATTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAg > 1:374959/1‑143 (MQ=255) gTTTCTGACTCAGGACTATTTTAAGAATAGCGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGTGAGCGGCAAGATTACACCAGTTCGTTCGGGCAGGTCTCGCCTTTCTCCAGCTTGCTTAGGt > 1:73820/1‑143 (MQ=255) cTGACTCAGGACTATTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTg < 1:232744/143‑1 (MQ=255) ggcTCACGACTAGTTGCAGCATAGAGGATGAAAGGTCATTGGGGATCATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCCAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCa < 1:12293/141‑1 (MQ=255) gACTCAGGACTATTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCa < 1:407013/143‑1 (MQ=255) aCTCAGGACTATTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGCTTGCTTAAGTTTTGCAg > 1:8394/1‑143 (MQ=255) cctaGGACTATTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGCTTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGc < 1:101353/140‑1 (MQ=255) tCAGGACTATTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCg > 1:266369/1‑143 (MQ=255) cAGGACTATTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGt < 1:177275/143‑1 (MQ=255) cTATTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCt > 1:168556/1‑143 (MQ=255) tATTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGCTTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTCTTCCCGCTTGCTTCCGCTTTGCAGCGTAGTCTg > 2:11673/1‑143 (MQ=255) tATTTGAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTg < 1:98926/143‑1 (MQ=255) aTTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTga < 1:223049/143‑1 (MQ=255) ttttAAGAATAGAGGTTGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCTGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTgag < 2:19097/143‑1 (MQ=255) tttAAGAATAGAGGATGAAAGGTGATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTgaga < 2:172781/143‑1 (MQ=255) attAATAATAGAGGACGAAAGGTCATTGGGGATCATCTGCATCAGCTCCCCTGGAATGCAGGGGAGCTGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTGGCAGCGTAGTCTgaga < 2:340337/142‑1 (MQ=255) aaTAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACt > 2:376431/1‑143 (MQ=255) aaTAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTCTTTCCAGACTGCTGACGCTTTGCAGCGTAGTGTGAGAAATACt > 2:464748/1‑143 (MQ=255) gtAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTg < 1:327087/142‑1 (MQ=255) ctAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGACAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAATTACTg < 2:391124/142‑1 (MQ=255) agagGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGt < 1:377353/143‑1 (MQ=255) ggcggAAAGGGCAGTGGTAATCATCGGAAGGAGCTGCGCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTGTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGTTCag < 1:357378/139‑1 (MQ=255) ggATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCag < 1:239098/143‑1 (MQ=255) gATGAAAGGTCATTGGGGATTATCTGAATCAGGTCCCCTGGAGTGCAGGGGAGCGGCAAGATTAAACCAGCTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCaga < 1:416508/143‑1 (MQ=255) gATGAAAGGTCATTGGGGATCATCTGAAGCAGCCCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCaga < 1:16314/143‑1 (MQ=255) atgatgggTCATTTGCGCTTGTGTGATTCAGCTCCCCTGGACTGCCGGGGGGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCagag < 2:395774/137‑1 (MQ=255) aTGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCagag > 1:175557/1‑143 (MQ=255) gAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATAGTGGGCAGAGCt > 2:111911/1‑143 (MQ=255) aaGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTGAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGCGCTTc > 1:32474/1‑143 (MQ=255) aGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTct > 2:60664/1‑143 (MQ=255) gTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGCAATTCTGGTCAGAGGTTctga > 1:58324/1‑142 (MQ=255) aTTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACTAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCGTCTGCTGt > 2:251712/1‑143 (MQ=255) aTTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAGTACTGGTCAGAGCTTCTGCTGt > 1:258302/1‑143 (MQ=255) aTTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGt > 2:100058/1‑143 (MQ=255) tGGGGATTAGCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCa < 1:260915/143‑1 (MQ=255) ggggAGTATCTGAATAAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAg < 2:303796/143‑1 (MQ=255) tATCTGACTCAGCGCCCTTGGAGTGCATGGGATCGGCAAGATTAAACCAGTTCCTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTATGTTTTGCAGCGTAGTCTGACAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGc < 2:76679/143‑1 (MQ=255) tATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGc < 1:298932/143‑1 (MQ=255) aTCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGACAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGCATGcc > 2:45433/1‑143 (MQ=255) tCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCt > 1:59636/1‑143 (MQ=255) gAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGt > 2:197555/1‑143 (MQ=255) aaTCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGTg > 1:157160/1‑143 (MQ=255) aaTCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGCAATGCCTGGtc > 2:392145/1‑142 (MQ=255) cgCTCCCCTGCATTCCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATAATGGTCAGAGCTTCTGCTGTCAGGACTGCCTGGTGCCCg > 2:306011/2‑143 (MQ=255) gCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGAAGGTTTCGCCTTTTTCCCGGTTGAAAGAGACTCGACAAATCGTCAAATTATTACTGGTCAGAGCTTCTGCAGTCAGGAATCCCTGGTgacagg > 2:458910/1‑138 (MQ=255) gCTCCCCTGCATTCCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCCGCTTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGTGCCCgg > 1:107945/1‑143 (MQ=255) cTCCCCTGCATTCCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTCAAGTTATGCAGCGTAGTCTGAGAAATACTGGAAAGAGGTTCTGCTGTCAGGAATGCCTGGTGCCCGGt > 1:237078/1‑143 (MQ=255) tCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGTGCCCGGTa < 1:71131/143‑1 (MQ=255) gccgggAAGGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCGTAAGTTTTGCAGCGTAGTCTGCGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGTGCCCGGTaaa < 1:35053/139‑1 (MQ=255) cccTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGTGCCCGGTaaa < 2:263392/143‑1 (MQ=255) cccGGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGAAAAGGCAGATATCGGCTTTTTCCAGATTGCTCAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGTGCCCGGTaaa < 1:446475/143‑1 (MQ=255) gcTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTCCTGCCAGGAAGGCCTGGTCCCCGGTAAAc > 2:213485/2‑143 (MQ=255) ccTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGACTGCCTGGTGCCCGGTAAAc > 2:42608/1‑143 (MQ=255) ccTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGTGCCCAGTAAAc > 1:352967/1‑143 (MQ=255) ctcgAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGCTCAGGTTTCGCCCTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGTGCCCGGTAAACa < 2:131044/140‑1 (MQ=255) cTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGACTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGTGCCCGGTAAACa > 1:220520/1‑143 (MQ=255) tGGAAGGCAGGGGTGCGGCAAGATTCATCCAGTTCGTTCGGGCAGGTTTCGCCTATTTCCAGATTGCTTAAGTTTTGCAGCGTGGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGTGCCCGGTAAACAg < 2:399027/143‑1 (MQ=255) | CACATCCCGCCATCAGCAGGCTTAGCGCAACAAACGCGGCTACTTTCTTCATTGTGGTTCTCAATTACAGTTTCTGACTCAGGACTATTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAGCTTCTGCTGTCAGGAATGCCTGGTGCCCGGTAAACAG > NC_000913/1441692‑1441973 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |