| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,466,639 | C→T | 5.6% | pseudogene (1248/2518 nt) | ydbA → | putative outer membrane protein, N‑terminal fragment |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,466,639 | 0 | C | T | 5.6% | 218.0 / 2.8 | 84 | pseudogene (1248/2518 nt) | ydbA | putative outer membrane protein, N‑terminal fragment |
| Reads supporting (aligned to +/- strand): ref base C (42/37); new base T (3/2); total (45/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.81e-01 | |||||||||||
ACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGG‑AGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTG > NC_000913/1466497‑1466778 | agaGCGCAACGGTGGATAACAATGGCACCATGACCGTCACCGATCGGG‑AGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAAc < 1:332003/141‑1 (MQ=255) cAGCGCATCCGTGTATAACACGGGCACCATGACCGTCACCGATCCGG‑AGTCCATCGGTATCCAGGTTGACCGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACg < 2:275005/143‑1 (MQ=18) gcgcAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGG‑AGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGt > 1:201763/1‑143 (MQ=255) cgcAAGCGTTGATAAAGAGAGCACCATGCCGGTCACCGATCCGG‑AGTCCATGGGTATCCAGGTTGACGGCGACCAGGCGGTTGTGAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGtg < 2:472915/143‑1 (MQ=17) cgcAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGG‑AGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGtg > 1:202420/1‑143 (MQ=255) gcAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGG‑AGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGtga < 2:463289/143‑1 (MQ=255) ggATAACAAGGGCACCATGACCGTCACCGATCCGG‑AGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGCGGCACCGGCACGCAGATTAACGGGCATGCCGcaa > 1:285403/1‑141 (MQ=255) atgagaggggCACCATGACCGTCACCGGTCCGG‑AGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACg < 2:150788/136‑1 (MQ=255) tAACAAGGGCACCATGACCGTCACCGATCCGGTAATGCA‑ATTTATCCAGGTTGACGGCGACCAGGCGGTGGCGAAGTAAGAAGGCGTGTGCGCGATCACCAGCGGTGGCACCTGCACGCAGATTAACGGTGATGACGCCACgg > 2:229633/1‑143 (MQ=12) gggCACCATGACCGTCACCGATCCGG‑AGTCCATCGGTATTCAGGTTGACGTCGACCAGGCGATTGTTAATAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAaaca < 2:212967/143‑1 (MQ=255) cACCATGACCGTCACCGATCCGG‑AGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAaacaacg > 1:441362/1‑142 (MQ=255) atcgttCCTG‑AGTCCATCGTTATCCAGGTTGACTGTGACTTTGTGTTATATAACAACAAAGGGGAGAGCGCAATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAaccac < 1:87886/138‑1 (MQ=17) aCCGATCCGG‑AGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACCGCAACCAACAACGGCAAAaccac > 1:266666/1‑143 (MQ=255) aCCAATCCGG‑AGTCCATCGGTATCCAAGTTGACGGCGACCACGCGGTGGTTAAGAACGGAGGCGAGAGGGCGCTCACCACAGGAGGCACCGGCACACAGCTGAACGGTGATGACGCAACGGCAAACAACAGAGGCAAAaccac > 2:411919/1‑143 (MQ=17) ccGG‑AGTCCATCGGTATCCAGGTCGACGGCGACCAGGCGGTCGTCAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGa < 1:150454/143‑1 (MQ=255) cGG‑AGTCCATCGGTATCCAGGTTGACGGTGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGTAAAACCACCGTTGAc > 1:58969/1‑143 (MQ=255) cGG‑AGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGATGATAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGACCACGCCACGGCAAACAACACCGACAAAGACACTGTTGAc > 2:162678/1‑143 (MQ=18) gg‑AGTCCATCGGTATCCAGGTCGACGGCGACCAGGCCGTCGTCAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACg < 1:300402/143‑1 (MQ=255) gg‑AATCCATCGGCATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGAGGCACCGACAAACAGATTAACGGTGATGACGCCACCGCCCACAACAACGGCAAAACCAGGGCTGACg > 2:405227/1‑143 (MQ=255) g‑AGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATCAACGGTGATGACGCCACGGCAAACACCAACGGCAAAACCACCGTTGACgt > 1:164376/1‑142 (MQ=255) tCCATCGGTATCCAGGTTGGCGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGCCGGGaa > 2:144890/1‑143 (MQ=255) aTCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACACCGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCGCGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAggg > 1:100589/1‑142 (MQ=255) aTCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACACCGGCAAAACCACCGTTGACGGCGAGGa > 1:50651/1‑143 (MQ=255) aTCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTTCCGGCAAggc > 1:404145/1‑142 (MQ=255) aTCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGCCAAAACCACCGCTGAGCGCAAGGa > 2:340582/1‑143 (MQ=255) tCGGTATCCAGGCTGGCGGCGACCAGGCGGTTGTGAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGAt < 2:464086/143‑1 (MQ=255) aTCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCATACCACTACGGCAAAACCCCCGTTCACTTCAACGCTTCCAc > 1:291365/1‑143 (MQ=18) ccAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAGACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCg > 1:75064/1‑143 (MQ=255) cAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCGAACAACAGCGGCAAGAAGACCGTTCAGGGCAAGGACACCACCgg > 1:65312/1‑143 (MQ=18) cAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCAACGGCACGCAGATTAACGGTGATGACGCCACGGCACACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCgg > 1:156030/1‑143 (MQ=255) aGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACGACAACGGCAAAACGACCGTTGACGGCAAGGATTCCAGCGGt > 1:83292/1‑143 (MQ=255) gTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCCCCGTTGACGGCAAGGATTCCACCGCTAc > 1:87085/1‑143 (MQ=255) gccGACCAGGCGATCGTCAATAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAAt < 2:402814/141‑1 (MQ=255) aCCAGGCGGTTGTTAATAACGAACGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCt < 1:382599/143‑1 (MQ=255) aCCAGGCGGTGGGTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCt < 1:276204/143‑1 (MQ=255) caaGGCGGTGGTGAGTAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTg < 2:73492/141‑1 (MQ=11) cAGGCGGTTGTTAACAAGGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGAGGCCACGGCAAACAACACCGGCAACTTCGTTGTCTTTGGCAAGTATTCCACCGGTACGGAAATTGCTgg < 1:448530/143‑1 (MQ=17) cAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTgg < 2:202420/143‑1 (MQ=255) cAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTgg > 1:46916/1‑143 (MQ=255) cAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCAGCACCAACGGTGGCACCGGCACGCAGATTAACGGTTATGAAGACACAGCAAACATCAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTgg < 1:18057/143‑1 (MQ=17) cAGGCGGGTGTTCACCACGACGGCGAGAGCACCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTgg < 1:259039/143‑1 (MQ=14) ggTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTGCACCGGTACGGAAACGGCTGGaaaaa > 2:40849/1‑141 (MQ=255) gttgttAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATCAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCGCTGGCAATat > 2:279754/1‑142 (MQ=255) ttgttAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGTATCATCTTCATTACGCCACGGCACACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAAc > 1:320815/1‑143 (MQ=17) aacaacGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGaa < 1:119687/143‑1 (MQ=255) acaacGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAg < 2:300279/143‑1 (MQ=255) cGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGAt > 2:12998/1‑103 (MQ=255) cGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGAt < 1:12998/103‑1 (MQ=255) gAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGAt > 1:259715/1‑143 (MQ=255) caGGCGAGAGCACCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGAtt < 2:220148/142‑1 (MQ=255) agggCGAGGGCGCCATCACCAACGGTGGCACCGGCACGCAGATTACCGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGAtt < 2:201763/141‑1 (MQ=255) gagaGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGa < 2:46916/143‑1 (MQ=255) gacagaaccATCACCAGCGGGGGCACCGGGACGCAGATGAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGa < 2:251553/136‑1 (MQ=18) agagCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCGGGCAATAACGGGTAGGTGATTCAGGAc > 1:101467/1‑143 (MQ=255) agCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACgg > 1:12266/1‑143 (MQ=255) gcgcCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACCGCAAACAACAACGGCAAAACCACCGTTGAAGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCGGGACGGc > 1:404623/1‑143 (MQ=255) ccATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCaaaa < 1:418714/69‑1 (MQ=255) cATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGTAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATc < 2:58969/143‑1 (MQ=255) cATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGCCAAGGATTCCACCGGTACGGACCTTGCTGGCAATAACCGCAATGTGATTCAGGACGGAGATc > 1:237053/1‑143 (MQ=17) aTCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCt > 1:284471/1‑143 (MQ=255) tCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAaacaacaa < 2:299344/58‑1 (MQ=255) aCCAACGGTGGCACCGGCACGCAGATTAACGGTGATGCCGCCACGGCAAACAACCCCGGCACACCCACCGTTGACGGCAAGGATACCACAGAAACGAAAATTACTAGCAATAACGGAAAGGTGATTCAGGACGGCGATCTGGa > 1:133487/1‑143 (MQ=14) aCCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGa > 2:266201/1‑143 (MQ=255) gcAACGGAGGCACAGGCACGCAGATTAACGGTGACGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGAt < 1:33951/142‑1 (MQ=255) ccgaCGGTCGCACCGGCACGCGGATTCACGGTGATGCCGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGAt < 1:163801/140‑1 (MQ=18) ccACCGGTGGCACCGGCACGCAGATTAACGGTGACGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACCGCAAGGATTCCACCCGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGAt < 1:229633/143‑1 (MQ=255) cAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGACGGTGATTCCGGACGGCGATCTGGATg > 1:351250/1‑143 (MQ=255) cAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGGCGGCGATCGGGagg > 1:71342/1‑141 (MQ=255) cagggTGGCACGGGTGCGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGt < 2:50651/140‑1 (MQ=255) aCGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAACAACGGGAAGGTAAATCAGGAAGGCGATCTGGATGTc > 1:265404/1‑143 (MQ=255) tGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAgcg < 2:259715/143‑1 (MQ=255) aCCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAgcggcgg < 1:404527/143‑1 (MQ=255) cGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAgcggcggcg > 1:114261/1‑143 (MQ=255) ggCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGACGATGCTTCAGGAAGGCGATCTGGATGTCAGcggcggcgg > 2:455398/1‑143 (MQ=255) ggCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGAACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGCTCTGGATGTCAGcggcggcgg > 1:120980/1‑143 (MQ=255) acccAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACgg > 1:301638/4‑116 (MQ=255) acccAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACgg < 2:301638/113‑1 (MQ=255) aCGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGAt < 1:443984/66‑1 (MQ=40) gcaaactAACGGTGATGACGCCACAGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACg < 1:305194/137‑1 (MQ=255) cAGAGTAACGGAGATGACGCTACGGCAAACAACAAGGGCAGAACCGCCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACgg < 1:45296/143‑1 (MQ=18) gATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCGCTGGCAATAACGGGaa > 2:81222/1‑96 (MQ=255) gATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGaa < 1:81222/96‑1 (MQ=255) aTTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGAGGCGGTCACGGTAt > 1:316590/1‑143 (MQ=255) tAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCt < 2:20682/79‑1 (MQ=14) tAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGGCGGCGATCTGGATGTCAGCGGCGGCGGGCACGGGATTg > 1:134055/1‑143 (MQ=255) | ACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGG‑AGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTG > NC_000913/1466497‑1466778 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |