| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,296,060 | C→T | 34.8% | intergenic (+266/+376) | gltP → / ← yjcO | glutamate/aspartate : H(+) symporter GltP/Sel1 repeat‑containing protein YjcO |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,296,060 | 0 | C | T | 34.8% | 50.3 / 57.5 | 72 | intergenic (+266/+376) | gltP/yjcO | glutamate/aspartate : H(+) symporter GltP/Sel1 repeat‑containing protein YjcO |
| Reads supporting (aligned to +/- strand): ref base C (28/19); new base T (11/14); total (39/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.25e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.25e-01 | |||||||||||
AGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAG‑GTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTA > NC_000913/4295920‑4296200 | aGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAG‑GTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGc > 1:60810/1‑143 (MQ=32) gCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAG‑GTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCt > 1:152969/1‑143 (MQ=32) gTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAG‑GTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGa > 1:260487/1‑143 (MQ=17) gTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGAGTTAGCGTAATTTTGTAG‑GTCGGAGACGGCGGTTACGCCGCATCCGGCATAAACGCCGGa > 2:364114/1‑143 (MQ=11) tttATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTAAACGAAAGGCTCTATACAACACAGACATCTGATTTAGCGTGATTTTGTAG‑GTCGGATAAGGCGTTTACGCCGCATCCGACATCACTGCCTgct > 1:470314/1‑141 (MQ=2) tGCCGCATTCGACATCAACGCCTGATGCGACTCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAG‑GTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGa < 1:425181/143‑1 (MQ=17) tGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCCATAGCCTGATTTAGCGTGATTTTGTAG‑GTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGa > 2:131692/1‑143 (MQ=17) tGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAG‑GTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGa > 1:303923/1‑143 (MQ=32) gCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAG‑GTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGAc < 1:432103/143‑1 (MQ=32) gCCGCACCGGACGTCAAGTCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAG‑GTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGAc < 2:427692/143‑1 (MQ=11) ccgcccccGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAG‑GTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACg < 1:378618/137‑1 (MQ=17) ccGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAG‑GTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACg < 2:60810/143‑1 (MQ=17) cccATCCGACACCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGTCCGTGCCTTATAAGAATGTATCGTGTTTTTGTAG‑TCCCCATAAGTCGGTTACGCCGCATCCGACATCAACGCCTGATGCGACGc < 1:109192/141‑1 (MQ=2) gCATCCGACCTCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGAGCAAAAGCCTGCTTTCGCGTGATTTTGTAG‑GTCGGATAAGGCGTTTACGCCGCATCCGAGATCAATCCCTCATGcacccct > 2:324304/1‑137 (MQ=11) aTCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAG‑GTCGGCGAAGGCGTGTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTg > 2:411506/1‑143 (MQ=12) tCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAG‑GTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGc > 2:199514/1‑143 (MQ=21) tCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAG‑GTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGc > 1:267250/1‑143 (MQ=33) tCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAG‑GTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGc > 1:40789/1‑143 (MQ=33) gACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGGCTTAGCGTGATTCAGTATTGGCGG‑CAATGCGCTTACGCCGCATCCGCCATCAACGCCTGGTGCGACGCTTGcctc > 1:215870/1‑141 (MQ=11) gaaTCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTGGTAG‑GTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCcgcg < 2:273590/141‑1 (MQ=255) cATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAG‑GTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGt < 1:136786/143‑1 (MQ=38) ccgggCCGGATGCGACCCTTAACCCGTCTTATCAGGCCTCCGCCAGGCAGCGCAATAGCCTGATTTAGCGTGATTTTGTAG‑GTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCtt < 1:148870/139‑1 (MQ=14) cAACGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAG‑GTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCtt < 1:48494/143‑1 (MQ=21) aaCGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAG‑GTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTa > 1:421969/1‑143 (MQ=25) aCGCCTGATGCGACGCTTAACGCGTCTTCTCAGGCCTACGCCAGCCCGCGCACTAGCCTGATTTAGCGTGATTGTGTAG‑GTCGGATCAGGCGTTTACGCCGCATCCGTCATCCCTGCCTGACGCGACCCCTGCCGCCTCttct > 1:44139/1‑141 (MQ=11) ccTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAG‑GTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACg > 2:407951/1‑125 (MQ=17) ccTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAG‑GTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACg < 1:407951/125‑1 (MQ=18) ccTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAG‑GTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAg < 1:202138/143‑1 (MQ=39) cTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAG‑GTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGa < 2:102901/122‑1 (MQ=17) cTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAG‑GTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGa > 1:102901/1‑122 (MQ=32) cTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAG‑GTCGGATAAGGCGTTTACGCCGCATCCGACATAAACGCCTGATGCGACGCTTGCCGCGGCTTATCCgg > 1:364617/1‑143 (MQ=255) gATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAG‑GTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTCATCAGGcc > 2:260138/1‑143 (MQ=25) aTGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAG‑GTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCGGGCCt > 1:224779/1‑143 (MQ=37) cGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAG‑GTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTatc < 2:40789/143‑3 (MQ=18) cGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAG‑GTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTatc < 2:267250/143‑3 (MQ=38) gACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAG‑GTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATACGACGCTTGCAGCGTCGTATCAGCCCTatct > 1:47070/1‑140 (MQ=11) gcgTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAG‑GTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCCAGCCTACGCCAGCCAgcgg > 2:95688/1‑142 (MQ=255) cgTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAG‑GTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGc < 1:49163/95‑1 (MQ=21) cgTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAG‑GTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGc < 2:140920/95‑1 (MQ=21) cgTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAG‑GTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGc > 2:49163/1‑95 (MQ=33) cgTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAG‑GTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGc > 1:140920/1‑95 (MQ=34) tCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAG‑GTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCt < 1:453899/143‑1 (MQ=38) aGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAG‑GTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCtt < 2:82067/100‑1 (MQ=21) gCCTACGCCAGACAGCGCGATAGCCTGATTCAGCGTGATTTGGTAG‑GTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGAtt < 1:332943/143‑1 (MQ=255) cTACGCCAGGCGGCGCAATAGCCGAATTTAGGGTGATTTTGTAG‑GTCGGATAGGGCGTATACGCCGCATAATACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTa < 2:97749/143‑1 (MQ=14) aCGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAG‑GTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGa < 2:188903/84‑1 (MQ=18) aCGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAG‑GTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGa < 2:43893/84‑1 (MQ=25) aCGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAG‑GTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGc < 2:152969/143‑1 (MQ=38) gcgcCATTGGCTGATTTAGCGTGATTTTGTAG‑GTCTGACAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGt < 2:35635/143‑1 (MQ=11) ccTGATTTAGCGTGATTTTGTAG‑GTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATGCCAGACAGCGCAATAGCCTGCTTTAGCGTGATTTTGTAGGTCggct > 1:418611/1‑141 (MQ=255) ccTGATTTAGCGTGATTTTGTAG‑GTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGAt > 2:421035/1‑143 (MQ=37) tgttttCGCGTGATTTGGTGG‑GCCGCATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATaa < 2:114260/140‑1 (MQ=11) tGATTTAGCGTGATTTTGTAG‑GTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATaa > 1:301500/1‑143 (MQ=39) cGTGATTTTGTAG‑GTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGc < 2:471699/63‑1 (MQ=255) cGTGATTTTGTAG‑GTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCt < 1:10165/64‑1 (MQ=255) tGATTTTGTAG‑GTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGcc > 2:199739/1‑50 (MQ=255) tGATTTTGTAG‑GTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGcc < 1:199739/50‑1 (MQ=255) gATTTTGTAG‑GTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACGGCGCATTAGCCTGATTTAGCGTGATTTTGTAGGTCGGGTAAGGCGtttctct > 2:452675/1‑139 (MQ=255) tttGTAG‑GTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGCTTTTGTACGTCGGATACGGCGTTTATGCCGc > 1:406108/1‑143 (MQ=255) ttGTAG‑GTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCt < 2:6730/77‑1 (MQ=255) ttGTAG‑GTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCt > 1:6730/1‑77 (MQ=255) tGTAG‑GTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGACgagg > 1:288354/1‑140 (MQ=255) ggATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAAGAGCCTGAGTGCGCGGGATTTTGTAGGTCGGAGAAGGCGACTATGCCGCATGCgggatc > 2:213289/1‑138 (MQ=14) tAAGGCGTATACGCCGCATACGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGAGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAAc < 2:357428/143‑1 (MQ=255) ggCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAg < 1:316862/114‑1 (MQ=40) ggCGTTACCGCCGCATCCGACATCCTCGCCTGATGCGGCGCGGGACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGcc < 2:131449/143‑1 (MQ=11) gccgcATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCCGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGAc > 1:434706/1‑143 (MQ=21) cgcATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCGAGACAGCGCAATAGCCTGATTTAGCGTGATTTTCTAGCTCGGATAAGGCGTTTACACCGCATCCGACCTCAAGGCCTGAGacgacga > 2:121029/1‑142 (MQ=11) cgcATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCACTAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACCCCTGCTGCGACGc > 1:202971/1‑143 (MQ=255) cgcATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGCTGCGACGc > 1:205287/1‑143 (MQ=25) tCCGACATCAACGCCTGATGCGACGCTTGCCGCGt > 1:205896/1‑35 (MQ=255) aaCGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTGttg > 1:129392/1‑142 (MQ=17) | AGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAG‑GTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTA > NC_000913/4295920‑4296200 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |