New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4040481	NA (NA)	6 (0.140)	5/272	4.7	25.8%	intergenic (+58/‑36)	rrlA/rrfA	23S ribosomal RNA/5S ribosomal RNA
	?	NC_000913	= 4040505	18 (0.410)					intergenic (+82/‑12)	rrlA/rrfA	23S ribosomal RNA/5S ribosomal RNA
Rejected: Coverage evenness skew score above cutoff.

GCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGT  >  NC_000913/4040466‑4040619                |                                                                                                                                           gCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTctcct             >  2:324674/1‑143 (MQ=11)  ccTGATACAGATTAAATCAGAATGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACACAATGCAGAACTCAGAAGAGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTctcctc            >  1:60218/1‑143 (MQ=11)  ccTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGAGGTGACCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGCAGCGCCGATGGGAGAGCGGGGCctcctc            >  2:278977/1‑143 (MQ=11)    tGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCAt          <  1:646940/143‑1 (MQ=32)      aTACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGc        >  2:308404/1‑143 (MQ=32)            aTTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGAGGTAGTAGTGTGGTGGTCCCACCTGACGCCAGGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGt  <  1:692525/143‑1 (MQ=11)                |                                                                                                                                           GCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGT  >  NC_000913/4040466‑4040619

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.