Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 2,312,044 | 0 | C | A | 21.0% | 333.9 / 61.1 | 138 | G236C (GGC→TGC) ‡ | ompC | outer membrane porin C |
Reads supporting (aligned to +/- strand): ref base C (38/71); new base A (29/0); total (67/71) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.46e-11 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
Only 100 of 147 total aligned reads displayed.
CAACAGCTTCGAAGTTCTGTGCTTTGTTCGCCCAACCCAGGGAACCTACGCGAGTTGCGTTGTAGGTCTGGGTGTACTGAGCAGCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGATAGAACCGCCGACGCCGTCGCCGTTTTGACGCAGTGCGTCACGACCGTTGTTAGTT > NC_000913/2311900‑2312192 | cAACAGCTTCGAAGTTCTGTGCTTTGTTCGCCCAACCCAGGGAACCTACGCGAGTTGCGTTGTAGGTCTGGGTGTACTGAGCAGCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTa < 1:1433742/149‑1 (MQ=255) gCTTCGAAGTTCTGTGCTTTGTTCGCCCAACCCAGGGAACCTACGCGAGTTGCGTTGTAGGTCTGGGTGTACTGAGCAGCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGAt < 1:1433744/149‑1 (MQ=255) ttCGAAGTTATGTGCTTTGTTAGCACAACCCCGGGAACCTACTCTAGTTGCGTTGTAGGGCTGTGTGTACTTAGCAGCCAGGTAGATGTTGTTAGGGTCTTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCTCCGTTACCGATGt < 2:1433745/149‑1 (MQ=255) gAAGTTCTGTGCTTTGTTCGCCCAACCCAGGGAACCTACGCGAGTTGCGTTGTAGGTCTGGGTGTACTGAGCAGCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAag < 2:1433746/149‑1 (MQ=255) gTTCTGTGCTTTGTTCGCCCAACCCAGGGAACCTACGCGAGTTGCGTTGTAGGTCTGGGTGTACTGAGCAGCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAagcag < 2:1433748/149‑1 (MQ=255) gTTCTGTGCTTTGTTCGCCCAACCCAGGGAACCTACGCGAGTTGCGTTGTAGGTCTGGGTGTACTGAGCAGCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAagc > 1:1433809/1‑147 (MQ=255) tCTGTGCTTTGTTCGCCCAACCCAGGGAACCTACGCGAGTTGCGTTGTAGGTCTGGGTGTACTGAGCAGCCAGGTAGATGTTGTTAGCGTCGTATTTCAGCCCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCg > 1:1433795/1‑149 (MQ=255) cTGTGCTTTGTTCGCCCAACCCAGGGAACCTACGCGAGTTGCGTTGTAGGTCTGGGTGTACTGAGCCGCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGCTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCgg < 1:1433749/149‑1 (MQ=255) cTGTGCTTTGTTCGCCCAACCCAGGGAACCTACGCGAGTTGCGTTGTAGGTCTGGGTGTACTGAGCAGCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCgg < 2:1433750/149‑1 (MQ=255) tgCTTTGTTCGCCCAACCCAGGGAACCTACGCGAGTTGCGTTGTAGGTCTGGGTGTACTGAGCAGCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGgtgt < 2:1433753/149‑1 (MQ=255) cTTTGTTCGCCCAACCCAGGGAACCTACGCGAGTTGCGTTGTAGGTCTGGGTGTACTGAGCAGCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCgg > 1:1433810/1‑144 (MQ=255) cTTTGTTCGCCCAACCCAGGGAACCTACGCGAGTTGCGTTGTAGGTCTGGGTGTACTGAGCAGCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTc > 1:1433803/1‑149 (MQ=255) tttGTTCGCCCAACCCAGGGAACCTACGCGAGTTGCGTTGTAGGTCTGGGTGTACTGAGCAGCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCATGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCt < 2:1433754/149‑1 (MQ=255) tttGTTCGCCCAACCCAGGGAACCTACGCGAGTTGCGTTGTAGGTCTGGGTGTACTGAGCAGCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCt < 1:1433755/149‑1 (MQ=255) tGTTCGCCCAACCCAGGGAACCTACGCGAGTTGCGTTGTAGGTCTGGGTGTACTGAGCAGCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTg > 1:1782817/1‑148 (MQ=255) gTTCGCCCAACCCAGGGAACCTACGCGAGTTGCGTTGTAGGTCTGGGTGTACTGAGCAGCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAg > 1:1433776/1‑149 (MQ=255) tCGCCCAACCCAGGGAACCTACGCGAGTTGCGTTGTAGGTCTGGGTGTACTGAGCAGCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCa > 1:1433806/1‑149 (MQ=255) cGCCCAACCCAGGGAACCTACGCGAGTTGCGTTGTAGGTCTGGGTGTACTGAGCAGCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTaa < 1:1433758/130‑1 (MQ=255) ccAACCCAGGGAACCTACGCGAGTTGCGTTGTAGGTCTGGGTGTACTGAGCAGCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAg < 2:1433759/149‑1 (MQ=255) gggAACCTACGCGAGTTGCGTTGTAGGTCTGGGTGTACTGAGCAGCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTg < 2:1433761/149‑1 (MQ=255) aaCCTACGCGAGTTGCGTTGTAGGTCTGGGTGTACTGAGCAGCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAg < 1:1433762/149‑1 (MQ=255) aCCTACGCGAGTTGCGTTGGAGGTCTGGGTGTACTGAGCAGCCAGGTAGATGTTGTTAGCGTCGTAGTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGc < 1:1433763/149‑1 (MQ=255) tACGCGAGTTGCGTTGTAGGTCTGGGTGTACTGAGCAGCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGtt < 1:1433766/140‑1 (MQ=255) aCGCGAGTTGCGTTGTAGGTCTGGGTGTACTGAGCAGCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTgg < 1:1433767/148‑1 (MQ=255) gAGTTGCGTTGTAGGTCTGGGTGTACTGAGCAGCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGATATCAGAACTCTCCCAATAACAAAAAAAAACAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTgg > 2:1433808/1‑144 (MQ=255) gCGTTGTAGGTCTGGGTGTACTGAGCAGCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGcac > 1:1433834/1‑148 (MQ=255) tGTAGGTCTGGGTGTACTGAGCAGCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGca < 1:1433770/143‑1 (MQ=255) gTAGGTCTGGGTGTACTGAGCAGCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGa > 1:1433874/1‑149 (MQ=255) gTAGGTCTGGGTGTACTGAGCAGCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGa < 2:1433771/149‑1 (MQ=255) aGGTCTGGGTGTACTGAGCAGCCAGGTAGTTGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGGAGCGTTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATa < 2:1433772/149‑1 (MQ=255) cTGGGTGTACTGAGCAGCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGCTGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGa < 1:1433773/149‑1 (MQ=255) tGGGTGTACTGAGCAGCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACAACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGa > 1:1433837/1‑148 (MQ=255) tGAGCAGCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTa > 1:1433814/1‑149 (MQ=255) cagcCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCa < 2:1433776/149‑1 (MQ=255) gcCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATa < 2:1433778/149‑1 (MQ=255) gcCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATa < 2:1433780/149‑1 (MQ=255) ccAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATaa > 1:1433815/1‑149 (MQ=255) ccAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGAGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATaa > 1:1433894/1‑149 (MQ=255) ccAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGATATCAGAACTCTCCCAATAAAAAAAAAAAACAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATaa > 2:1433817/1‑149 (MQ=255) aGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCa < 1:1433781/90‑1 (MQ=255) aGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGGTTCAGCCCGGTCGCCGTTACGGATGTAAGCCGCGGTGTTCTGAGCAGCAGTCCGTTTGGAGCTGGAGATCGCCCCACCGATACCGAAACCTTCGTAATCATAAGt > 1:1433866/1‑149 (MQ=255) aGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGGTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCCTCAGTACGTTTGGAGCTGGAGATCGCCCCACCGCTCCCGAAACCTTCGTAATCATAAGt > 1:1433838/1‑149 (MQ=255) ggTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCgg < 1:1433783/78‑1 (MQ=255) ggTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTgg < 1:1433784/108‑1 (MQ=255) ggTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTg > 1:1433892/1‑149 (MQ=255) gTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGa < 2:1433785/149‑1 (MQ=255) gTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGATATCAGAACTCTCCCAGTAAAAAAAAAAAAAAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGga > 2:1433782/1‑108 (MQ=255) gTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGATATCAGAACTCTCCCAATAAAAAAAAAAAACAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGc > 2:1433821/1‑114 (MQ=255) gTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGATATCAGAACTCTCCCAATAAAAAAAAAAAAAAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGa > 2:1433854/1‑149 (MQ=255) tAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGAt < 2:1433786/149‑1 (MQ=255) aGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGAt > 1:1433869/1‑148 (MQ=255) gATGTTGTTCGCGTCGTATTTCAGACCACCAGTGTAGATATCAGAACTCTCCCAATAAAAAAAAAAAACAACGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGATAg > 2:1433851/1‑149 (MQ=255) gATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGATAg < 2:1433788/149‑1 (MQ=255) gttgttAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGATAGAAc < 1:1433790/149‑1 (MQ=255) gttgttAGCGTCGTATTTCAGACCACCAGTGTAGATATCAGAACTCTCCCAATAAAAAAAAAAAACAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGATAGAAc > 2:1433841/1‑149 (MQ=255) gttgttAGCGTCGTATTTCAGACCACCAGTGTAGATATCAGAACTCTCCCAATAAAAAAAAAAAAAAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGATAGAAc > 2:1433879/1‑149 (MQ=255) ttgttAGCGTCGTATTTCAGACCACCAGTGTAGATATCAGAACTCTCCCAATAAAAAAAAAAAAAAACGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGATAGAAcc > 2:1433844/1‑149 (MQ=255) tgttAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCt < 1:1433819/97‑1 (MQ=255) gttAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGATAGAAcc < 2:1433791/147‑1 (MQ=255) gttAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGATAGAAcc > 1:1433791/1‑147 (MQ=255) gttAGCGTCGTATTTCAGACCACCAGTGTAGATATCAGAACTCTCCCAATAAAAAAAAAAAACAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTg > 2:1433819/1‑97 (MQ=255) gttAGCGTCGTATTTCAGACCACCAGTGTAGATATCAGAACTCTCCCAATAAAAAAAAAAAAAAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGATAGAAccgc > 2:1433840/1‑149 (MQ=255) gttAGCGTCGTATTTCAGACCACCAGTGTAGATATCAGAACTCTCCCAATAAAAAAAAAAAAAAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGATAGAAccgc > 2:1433863/1‑149 (MQ=255) gttAGCGTCGTATTTCAGACCACCAGTGTAGATATCAGAACTCTCCCAATAAAAAAAAAAAAAAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGATAGAAccgc > 2:1433846/1‑149 (MQ=255) gttAGCGTCGTATTTCAGACCACCAGTGTAGATATCAGAACTCTCCCAATAAAAAAAAAAAAAAGCGGTGTTCTGAGCATCAGTACGGTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGATAGAAccgc > 2:1433832/1‑149 (MQ=255) ttAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGga < 1:1433820/98‑1 (MQ=255) tAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGATAGaa > 1:1433872/1‑143 (MQ=255) tAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGATAGAAccgcc < 1:1433792/148‑1 (MQ=255) tAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTAACGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTAGAGCTGGAGATCGCTCCACCGATACCGAAACCTTCGTAATCATAAGTGATAGAAcctccg > 1:1433850/1‑149 (MQ=255) aGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGATAGAACCGCCGa < 2:1433793/149‑1 (MQ=255) gtcgtATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTgg < 1:1433825/86‑1 (MQ=255) tcgtATTTCAGACCACCAGTGTAGGTTTCAGCCCGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCCCCGATACCGAAACCTTCGGAATCATAAGTGATAGAAccgcc > 1:1433886/1‑143 (MQ=255) tcgtATTTCAGACCACCAGTGTAGATATCAGAACTCTCCCAATAAAAAAAAAAAACAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGATAGAACCGCCGAcgcc > 2:1433822/1‑149 (MQ=255) tcgtATTTCAGACCACCAGTGTAGATATCAGAACTCTCCCAATAAAAAAAAAAAAAAGCGGTGTTCTGAGCATCAGTACGTTTGGa > 2:1433825/1‑86 (MQ=255) cgtATTTCAGACCACCAGTGTAGATATCAGAACTCTCCCAATAAAAAAAATAAAAAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACATTCTTAATCTTAAGTGATAGAACCGCCGAcgccg > 2:1433824/1‑149 (MQ=255) gtATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGATAGAACCGCCGAcgccgt < 2:1433795/149‑1 (MQ=255) gtATTTCAGACCACCAGTGTAGATATCAGAACTCTCCCAATAAAAAAAAAAAACAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGATAGAACCGCCGAcgccgt > 2:1433830/1‑149 (MQ=255) aTTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCg < 1:1433827/93‑1 (MQ=255) aTTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAAt < 2:1433796/120‑1 (MQ=255) aTTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAAt > 1:1433796/1‑120 (MQ=255) tttCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTc < 1:1433799/61‑1 (MQ=255) tttCAGACCACCAGCGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGATAGAACCGCCGAcgccgtcgc < 1:1433798/149‑1 (MQ=255) ttCAGACCACCAGTGTAGATATCAGAACTCTCCCAATAAAAAAAAAAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGATAGAACCGCCGAcgccgtcgcc > 2:1433826/1‑149 (MQ=255) caccaGTGTAGGTTTCAGCACGGTCGCCGTTACCGTTGTAAGCAGCGGTGTTCTGATCATCAGTACGTTTTGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGATAGAACCGCCGACGCCGTCGCCGTTTTGa < 1:1433824/149‑1 (MQ=255) caccaGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAGGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCCCCACCGATACCGAAACCTTCGTAATCATAAGTGATAGAACCGCCGACGCCGTCGCCGTTTTGa > 1:1433917/1‑149 (MQ=255) caccaGTGTACGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGCAGCTGGAGATCGCACCTCCGATAGCGAAACCTTCGTATTCTTTAGTGATAGAACCGCCGACGCCGTCGCCGTTTTGa < 1:1433829/149‑1 (MQ=255) aGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGCAACCTTCGTAATCATAAGTGATAGAACCGCCGACGCCGTCGCCGTTTTGACGCa > 1:1433865/1‑149 (MQ=255) tAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGATAGAACCGCCGACGCCGTCGCCGTTTTGACGCAGTGc > 2:1433849/1‑149 (MQ=255) tttCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGATAGAACCGCCGACGCCGTCGCCGTTTTGACGCAGTGCGTCa < 1:1433802/149‑1 (MQ=255) ttCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGATAGAACCGCCGACGCCGTCGCCGTTTTGACGCAGTGCGTCAc < 2:1433803/149‑1 (MQ=255) cAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTc < 1:1433805/91‑1 (MQ=255) cAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGATAGAACCGCCGACGCCGTCGCCGTTTTGACGCAGTGCGTCACGa < 2:1433804/149‑1 (MQ=255) cACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGATAGAACCGCCGACGCCGTCGCCGTTTTGACGCAGTGCGTCACGACCg > 2:1433957/1‑149 (MQ=255) ggTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGTAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGATAGAACCGCCGACGCCGTCGCCGTTTTGACGCAGTGCGTCACGACCgttg < 2:1433807/149‑1 (MQ=255) cGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGCGCTGGAGATCGCACCACCGATTCCGAAACCTTCGTAATCATAAGTGATAGAACCGCCGACGCCGTCGCCGTTTTGACGCAGTGCGTCACGACCGTTgtta > 2:1433902/1‑149 (MQ=255) ccGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGATAGAACCGCCGACGCCGTCGCTGTTTTGACGCAGTGCGTCACGACCGTTgttagt > 2:1433860/1‑149 (MQ=255) ccGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGATAGAACCGCCGACGCCGTCGCCGTTTTGACGCAGTGCGTCACGACCGTTgttagt > 1:1433904/1‑149 (MQ=255) ccGTTACAGATGTAAGCAGCGGTGTTCTGAGCATCAGTACg > 1:1433858/1‑41 (MQ=255) cGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGATAGAACCGCCGACGCCGTCGCCGTTTTGACGCAGTGCGTCACGACCGTTgttagtt < 2:1433811/149‑1 (MQ=255) cGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGATAGAACCGCCGACGCCGTCGCCGTTTTGACGCAGTGCGTCACGACCGTTgttagtt < 2:1433810/149‑1 (MQ=255) | CAACAGCTTCGAAGTTCTGTGCTTTGTTCGCCCAACCCAGGGAACCTACGCGAGTTGCGTTGTAGGTCTGGGTGTACTGAGCAGCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGATAGAACCGCCGACGCCGTCGCCGTTTTGACGCAGTGCGTCACGACCGTTGTTAGTT > NC_000913/2311900‑2312192 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |