BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 2283592	NA (NA)	71 (0.520)	21/200	12.8	32.6%	noncoding (1/1195 nt)	IS5	repeat region
*	?	CP009273	3724818 =	147 (1.070)	71 (0.520)	21/200	12.8	32.6%	coding (328/993 nt)	xylF	D‑xylose transporter subunit
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 150 total aligned reads displayed.

CATGATAAACCGGGGTGTCGATGTTCTTGTCATTATTCCGTATAACGGTCAGGTATTAAGTAACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCAGGCAAAAGCCCTGGTCGAT  >  CP009273/3724718‑3724916

cATGATAAACCGGGGTGTCGATGTTCTTGTCATTATTCCGTATAACGGTCAGGTATTAAGTAACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTAt                                                                                                    <  1:110008/101‑1 (MQ=255)

cATGATAAACCGGGGTGTCGATGTTCTTGTCATTATTCCGTATAACGGTCAGGTATTAAGTAACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTAt                                                                                                    <  1:268041/101‑1 (MQ=255)

cATGATAAACCGGGGTGTCGATGTTCTTGTCATTATTCCGTATAACGGTCAGGTATTAAGTAACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTAt                                                                                                    <  1:162420/101‑1 (MQ=255)

 aTGATAAACCGGGGTGTCGATGTTCTTGTCATTATTCCGTATAACGGTCAGGTATTAAGTAACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTAtt                                                                                                   <  2:1976606/101‑1 (MQ=255)

  tGATAAACCGGGGTGTCGATGTTCTTGTCATTATTCCGTATAACGGTCAGGTATTAAGTAACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTa                                                                                                  >  2:1107994/1‑101 (MQ=255)

  tGATAAACCGGGGTGTCGATGTTCTTGTCATTATTCCGTATAACGGTCAGGTATTAAGTAACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTa                                                                                                  <  1:802537/101‑1 (MQ=255)

  tGATAAACCGGGGTGTCGATGTTCTTGTCATTATTCCGTATAACGGTCAGGTATTAAGTAACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTa                                                                                                  <  2:806586/101‑1 (MQ=255)

    aTAAACCGGGGTGTCGATGTTCTTGTCATTATTCCGTATAACGGTCAGGTATTAAGTAACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGc                                                                                                <  1:2879322/101‑1 (MQ=255)

     tAAACCGGGGTGTCGATGTTCTTGTCATTATTCCGTATAACGGTCAGGTATTAAGTAACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCt                                                                                               >  1:399287/1‑101 (MQ=255)

      aaaCCGGGGTGTCGATGTTCTTGTCATTATTCCGTATAACGGTCAGGTATTAAGTAACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAggga                                                                                              >  2:2710083/1‑98 (MQ=255)

      aaaCCGGGGTGTCGATGTTCTTGTCATTATTCCGTATAACGGTCAGGTATTAAGTAACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCtt                                                                                              >  1:1179077/1‑101 (MQ=255)

      aaaCCGGGGTGTCGATGTTCTTGTCATTATTCCGTATAACGGTCAGGTATTAAGTAACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCtt                                                                                              >  1:562335/1‑101 (MQ=255)

       aaCCGGGGTGTCGATGTTCTTGTCATTATTCCGTATAACGGTCAGGTATTAAGTAACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTa                                                                                             <  1:1733129/101‑1 (MQ=255)

       aaCCGGGGTGTCGATGTTCTTGTCATTATTCCGTATAACGGTCAGGTATTAAGTAACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTa                                                                                             <  1:3076135/101‑1 (MQ=255)

        aCCGGGGTGTCGATGTTCTTGTCATTATTCCGTATAACGGTCAGGTATTAAGTAACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAgggaag                                                                                            <  1:2588212/101‑6 (MQ=255)

        aCCGGGGTGTCGATGTTCTTGTCATTATTCCGTATAACGGTCAGGTATTAAGTAACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTAc                                                                                            <  1:2441049/101‑1 (MQ=255)

         ccGGGGTGTCGATGTTCTTGTCATTATTCCGTATAACGGTCAGGTATTAAGTAACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACg                                                                                           <  2:204319/101‑1 (MQ=255)

            gggTGTCGATGTTCTTGTCATTATTCCGTATAACGGTCAGGTATTAAGTAACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGAcc                                                                                        >  1:1833846/1‑101 (MQ=255)

            gggTGTCGATGTTCTTGTCATTATTCCGTATAACGGTCAGGTATTAAGTAACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGAcc                                                                                        <  2:536916/101‑1 (MQ=255)

             ggTGTCGATGTTCTTGTCATTATTCCGTATAACGGTCAGGTATTAAGTAACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCg                                                                                       >  2:1048827/1‑101 (MQ=255)

             ggTGTCGATGTTCTTGTCATTATTCCGTATAACGGTCAGGTATTAAGTAACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCg                                                                                       <  2:1467870/101‑1 (MQ=255)

              gtgtCGATGTTCTTGTCATTATTCCGTATAACGGTCCGGTATTAAGTAACGATGTAAAAGAAGCCAAAAAAAAAAGCATTAAACTATTTTTTTACGACCGt                                                                                      >  2:3281336/1‑101 (MQ=255)

                  cGATGTTCTTGTCATTATTCCGTATAACGGTCAGGTATTAAGTAACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGa                                                                                  <  1:122936/101‑1 (MQ=255)

                     tGTTCTTGTCATTATTCCGTATAACGGTCAGGTATTAAGTAACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTa                                                                               >  1:2951827/1‑101 (MQ=255)

                      gTTCTTGTCATTATTCCGTATAACGGTCAGGTATTAAGTAACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTaa                                                                              >  1:1421916/1‑101 (MQ=255)

                      gTTCTTGTCATTATTCCGTATAACGGTCAGGTATTAAGTAACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTaa                                                                              >  1:1017498/1‑101 (MQ=255)

                       ttCTTGTCATTATTCCGTATAACGGTCAGGTATTAAGTAACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAAc                                                                             <  2:1328898/101‑1 (MQ=255)

                         cTTGTCATTATTCCGTATAACGGTCAGGTATTAAGTAACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGa                                                                           >  2:2841516/1‑101 (MQ=255)

                         cTTGTCATTATTCCGTATAACGGTCAGGTATTAAGTAACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGa                                                                           >  2:37040/1‑101 (MQ=255)

                          ttGTCATTATTCCGTATAACGGTCAGGTATTAAGTAACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGAt                                                                          <  2:2013962/101‑1 (MQ=255)

                             tCATTATTCCGTATAACGGTCAGGTATTAAGTAACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCg                                                                       <  1:1411295/101‑1 (MQ=255)

                               attattCCGTATAACGGTCAGGTATTAAGTAACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGa                                                                     >  1:1137398/1‑101 (MQ=255)

                                 tattCCGTATAACGGTCAGGTATTAAGTAACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGata                                                                   <  1:2085337/101‑1 (MQ=255)

                                 tattCCGTATAACGGTCAGGTATTAAGTAACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGata                                                                   <  2:1428322/101‑1 (MQ=255)

                                  attCCGTATAACGGTCAGGTATTAAGTAACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGatat                                                                  <  2:3070011/101‑1 (MQ=255)

                                  attCCGTATAACGGTCAGGTATTAAGTAACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGatat                                                                  <  1:990508/101‑1 (MQ=255)

                                  attCCGTATAACGGTCAGGTATTAAGTAACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGatat                                                                  <  1:527228/101‑1 (MQ=255)

                                   ttCCGTATAACGGTCAGGTATTAAGTAACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATc                                                                 <  2:1637765/101‑1 (MQ=255)

                                   ttCCGTATAACGGTCAGGTATTAAGTAACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATc                                                                 <  1:3315802/101‑1 (MQ=255)

                                     ccGTATAACGGTCAGGTATTAAGTAACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGa                                                               >  1:3286594/1‑101 (MQ=255)

                                         ataACGGTCAGGTATTAAGTAACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGAtttt                                                           >  2:2183169/1‑101 (MQ=255)

                                           aaCGGTCAGGTATTAAGTAACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTta                                                         <  1:1675404/101‑1 (MQ=255)

                                            aCGGTCAGGTATTAAGTAACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTtat                                                        >  1:38121/1‑101 (MQ=255)

                                            aCGGTCAGGTATTAAGTAACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTtat                                                        <  1:2579462/101‑1 (MQ=255)

                                              ggTCAGGTATTAAGTAACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTatat                                                      >  2:1316576/1‑101 (MQ=255)

                                              ggTCAGGTATTAAGTAACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTatat                                                      >  1:2484461/1‑101 (MQ=255)

                                              ggTCAGGTATTAAGTAACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTatat                                                      >  1:2226631/1‑101 (MQ=255)

                                                tCAGGTATTAAGTAACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATAttt                                                    <  1:1864017/101‑1 (MQ=255)

                                                 cAGGTATTAAGTAACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATAtttc                                                   <  1:2701658/101‑1 (MQ=255)

                                                  aGGTATTAAGTAACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATAtttct                                                  >  2:2333225/1‑101 (MQ=255)

                                                    gTATTAAGTAACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATAtttcttt                                                <  1:1959875/101‑1 (MQ=255)

                                                     tATTAAGTAACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATAtttctttc                                               <  1:2383237/101‑1 (MQ=255)

                                                      aTTAAGTAACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCg                                              >  2:2981424/1‑101 (MQ=255)

                                                       ttAAGTAACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGa                                             >  1:46685/1‑101 (MQ=255)

                                                       ttAAGTAACGTTGTAAAAGAAGCCAAACAAGAAAGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGa                                             <  1:1341546/101‑1 (MQ=255)

                                                           gTAACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAAc                                         <  1:3235050/101‑1 (MQ=255)

                                                            tAACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACg                                        <  1:3123534/101‑1 (MQ=255)

                                                            tAACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACg                                        <  2:1194669/101‑1 (MQ=255)

                                                               cGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGaaa                                     <  1:313184/101‑1 (MQ=255)

                                                                gTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGaaaa                                    >  1:2300561/1‑101 (MQ=255)

                                                                 ttGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGaaaaa                                   >  2:2485228/1‑101 (MQ=255)

                                                                  tGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAg                                  <  2:309380/101‑1 (MQ=255)

                                                                  tGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAg                                  <  2:2288521/101‑1 (MQ=255)

                                                                  tGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATCATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATACCGAAAAAg                                  <  2:1112365/101‑1 (MQ=255)

                                                                    tAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTc                                <  2:3048395/101‑1 (MQ=255)

                                                                    tAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTc                                <  2:2121261/101‑1 (MQ=255)

                                                                    tAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTc                                <  1:219134/101‑1 (MQ=255)

                                                                     aaaaGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCg                               >  2:1593195/1‑101 (MQ=255)

                                                                     aaaaGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCg                               <  2:3238457/101‑1 (MQ=255)

                                                                     aaaaGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCg                               >  2:325895/1‑101 (MQ=255)

                                                                     aaaaGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCg                               <  1:233258/101‑1 (MQ=255)

                                                                     aaaaGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCg                               <  1:1802786/101‑1 (MQ=255)

                                                                       aagaagCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGt                             <  2:1219188/101‑1 (MQ=255)

                                                                        agaagCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTg                            >  1:2903750/1‑101 (MQ=255)

                                                                        agaagCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTg                            >  1:1951386/1‑101 (MQ=255)

                                                                         gaagCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGa                           <  2:3318955/101‑1 (MQ=255)

                                                                            gCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACt                        <  2:986415/101‑1 (MQ=255)

                                                                            gCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACt                        <  1:2512070/101‑1 (MQ=255)

                                                                              cAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGc                      >  1:2264265/1‑101 (MQ=255)

                                                                              cAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGc                      >  2:2086851/1‑101 (MQ=255)

                                                                               aaaCAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCa                     >  2:270140/1‑101 (MQ=255)

                                                                               aaaCAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCa                     >  1:433388/1‑101 (MQ=255)

                                                                               aaaCAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCa                     >  2:871026/1‑101 (MQ=255)

                                                                               aaaCAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCa                     >  2:2899083/1‑101 (MQ=255)

                                                                               aaaCAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCa                     <  2:2887320/101‑1 (MQ=255)

                                                                                aaCAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCAg                    <  2:1856408/101‑1 (MQ=255)

                                                                                aaCAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCAg                    <  2:3124855/101‑1 (MQ=255)

                                                                                  cAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCAGGc                  >  2:2436728/1‑101 (MQ=255)

                                                                                      aagGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCAGGCaaaa              >  2:1812442/1‑101 (MQ=255)

                                                                                      aagGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCAGGCaaaa              >  1:320740/1‑101 (MQ=255)

                                                                                         gCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCAGGCAAAAGcc           <  2:1942644/101‑1 (MQ=255)

                                                                                           aTTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCAGGCAAAAGCCCt         <  1:764671/101‑1 (MQ=255)

                                                                                           aTTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCAGGCAAAAGCCCt         >  2:2195264/1‑101 (MQ=255)

                                                                                           aTTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGACGGTGAACTGCAGGCAAAAGCCCt         >  1:627904/1‑101 (MQ=255)

                                                                                             tAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCAGGCAAAAGCCCTgg       <  1:1683449/101‑1 (MQ=255)

                                                                                               cttccttAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCAGGCAAAAGCCCTGGTc     >  2:609149/6‑101 (MQ=255)

                                                                                               cttccttAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCAGGCAAAAGCCCTGGTc     <  1:60177/96‑1 (MQ=255)

                                                                                               aaGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCAGGCAAAAGCCCTGGTc     <  2:962493/101‑1 (MQ=255)

                                                                                                 tccttAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCAGGCAAAAGCCCTGGTCGa   >  2:466735/4‑101 (MQ=255)

                                                                                                  tATTAGCTTACGACCGTATGATTAACGATGCGGCTATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCAGGCAAAAGCCCTGGTCGat  >  1:1630564/1‑101 (MQ=255)

CATGATAAACCGGGGTGTCGATGTTCTTGTCATTATTCCGTATAACGGTCAGGTATTAAGTAACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCAGGCAAAAGCCCTGGTCGAT  >  CP009273/3724718‑3724916

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.