| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009273 | 1,107,147 | Δ1 bp | coding (829/2544 nt) | opgH → | membrane glycosyltransferase; nutrient‑dependent cell size regulator, FtsZ assembly antagonist |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,107,147 | 0 | C | . | 99.3% | 721.6 / ‑1.7 | 151 | coding (829/2544 nt) | opgH | membrane glycosyltransferase; nutrient‑dependent cell size regulator, FtsZ assembly antagonist |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base . (68/82); minor base A (1/0); total (69/82) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.57e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.36e-01 | |||||||||||
Only 100 of 151 total aligned reads displayed.
ACCATTAAACCCGGAGCATCGCACGGCGTTGATCATGCCTATCTGTAACGAAGACGTGAACCGTGTTTTTGCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAACACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGATATCTGCGTCGCAGAGCAAAAAGCCTGGATGGAGCTTATCGCTGAAGTCGGTGGCGAAGGTCAGATTTTCTATCGCCGCC > CP009273/1107026‑1107267 | aCCATTAAACCCGGAGCATCGCACGGCGTTGATCATGCCTATCTGTAACGAAGACGTGAACCGTGTTTTTGCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACttt < 2:1152965/126‑1 (MQ=255) ccATTAAACCCGGAGCATCGCACGGCGTTGATCATGCCTATCTGTAACGAAGACGTGAACCGTGTTTTTGCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTg < 1:3205387/126‑1 (MQ=255) ccATTAAACCCGGAGCATCGCACGGCGTTGATCATGCCTATCTGTAACGAAGACGTGAACCGTGTTTTTGCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTg > 1:2106113/1‑126 (MQ=255) ccATTAAACCCGGAGCATCGCACGGCGTTGATCATGCCTATCTGTAACGAAGACGTGAACCGTGTTTTTGCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTg > 1:1404102/1‑126 (MQ=255) ccATTAAACCCGGAGCATCGCACGGCGTTGATCATGCCTATCTGTAACGAAGACGTGAACCGTGTTTTTGCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTg < 1:3089885/126‑1 (MQ=255) cATTAAACCCGGAGCATCGCACGGCGTTGATCATGCCTATCTGTAACGAAGACGTGAACCGTGTTTTTGCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGa > 2:2383885/1‑126 (MQ=255) aTTAAACCCGGAGCATCGCACGGCGTTGATCATGCCTATCTGTAACGAAGACGTGAACCGTGTTTTTGCTGGCCTGCGTGCAACGTGGGAATCAGTAGAAGCCACCGGGAATGCCAAA‑ACTTTGAt > 1:1511724/1‑126 (MQ=255) ttAAACCCGGAGCATCGCACGGCGTTGATCATGCCTATCTGTAACGAAGACGTGAACCGTGTTTTTGCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATg < 1:1162428/126‑1 (MQ=255) aaaCCCGGAGCATCGCACGGCGTTGATCATGCCTATCTGTAACGAAGACGTGAACCGTGTTTTTGCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTc > 2:3097446/1‑126 (MQ=255) aCCCGGAGCATCGCACGGCGTTGATCATGCCTATCTGTAACGAAGACGTGAACCGTGTTTTTGCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTa < 1:1472380/126‑1 (MQ=255) cGGAGCATCGCACGGCGTTGATCATGCCTATCTGTAACGAAGACGTGAACCGTGTTTTTGCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATG‑CAAAAACTTTGATGTCTACac > 2:1774426/1‑125 (MQ=255) ggAGCATCGCACGGCGTTGATCATGCCTATCTGTAACGAAGACGTGAACCGTGTTTTTGCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACAtt < 2:514045/126‑1 (MQ=255) ggAGCATCGCACGGCGTTGATCATGCCTATCTGTAACGAAGACGTGAACCGTGTTTTTGCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACAtt > 1:2335239/1‑126 (MQ=255) gAGCATCGCACGGCGTTGATCATGCCTATCTGTAACGAAGACGTGAACCGTGTTTTTGCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTc > 2:3379032/1‑126 (MQ=255) gAGCATCGCACGGCGTTGATCATGCCTATCTGTAACGAAGACGTGAACCGTGTTTTTGCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTc < 2:2955513/126‑1 (MQ=255) gCATCGCACGGCGTTGATCATGCCTATCTGTAACGAAGACGTGAACCGTGTTTTTGCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCtt < 2:2155247/126‑1 (MQ=255) aTCGCACGGCGTTGATCATGCCTATCTGTAACGAAGACGTGAACCGTGTTTTTGCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAg < 2:1004128/126‑1 (MQ=255) aTCGCACGGCGTTGATCATGCCTATCTGTAACGAAGACGTGAACCGTGTTTTTGCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAg < 1:1629537/126‑1 (MQ=255) aTCGCACGGCGTTGATCATGCCTATCTGTAACGAAGACGTGAACCGTGTTTTTGCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAg > 1:627005/1‑126 (MQ=255) cGCACGGCGTTGATCATGCCTATCTGTAACGAAGACGTGAACCGTGTTTTTGCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTg > 2:2731815/1‑126 (MQ=255) cACGGCGTTGATCATGCCTATCTGTAACGAAGACGTGAACCGTGTTTTTGCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGAc > 2:145782/1‑126 (MQ=255) aCGGCGTTGATCATGCCTATCTGTAACGAAGACGTGAACCGTGTTTTTGCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACa < 1:1603610/126‑1 (MQ=255) cGGCGTTGATCATGCCTATCTGTAACGAAGACGTGAACCGTGTTTTTGCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAg > 2:643217/1‑126 (MQ=255) ggCGTTGATCATGCCTATCTGTAACGAAGACGTGAACCGTGTTTTTGCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGt > 2:3207930/1‑126 (MQ=255) ggCGTTGATCATGCCTATCTGTAACGAAGACGTGAACCGTGTTTTTGCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGt > 1:2514425/1‑126 (MQ=255) gCGTTGATCATGCCTATCTGTAACGAAGACGTGAACCGTGTTTTTGCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGtt < 2:990271/126‑1 (MQ=255) cGTTGATCATGCCTATCTGTAACGAAGACGTGAACCGTGTTTTTGCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTta < 1:527578/126‑1 (MQ=255) cGTTGATCATGCCTATCTGTAACGAAGACGTGAACCGTGTTTTTGCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTta < 1:850363/126‑1 (MQ=255) cGTTGATCATGCCTATCTGTAACGAAGACGTGAACCGTGTTTTTGCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTta > 2:580716/1‑126 (MQ=255) ttGATCATGCCTATCTGTAACGAAGACGTGAACCGTGTTTTTGCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTtata > 2:3022357/1‑126 (MQ=255) ttGATCATGCCTATCTGTAACGAAGACGTGAACCGTGTTTTTGCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTtata < 1:2449195/126‑1 (MQ=255) tGATCATGCCTATCTGTAACGAAGACGTGAACCGTGTTTTTGCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATaa < 2:2254896/126‑1 (MQ=255) tGATCATGCCTATCTGTAACGAAGACGTGAACCGTGTTTTTGCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATaa > 1:94053/1‑126 (MQ=255) tGATCATGCCTATCTGTAACGAAGACGTGAACCGTGTTTTTGCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATaa > 1:3140394/1‑126 (MQ=255) tGATCATGCCTATCTGTAACGAAGACGTGAACCGTGTTTTTGCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATaa > 2:2481807/1‑126 (MQ=255) gATCATGCCTATCTGTAACGAAGACGTGAACCGTGTTTTTGCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATAAc > 1:2560821/1‑126 (MQ=255) aTCATGCCTATCTGTAACGAAGACGTGAACCGTGTTTTTGCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATAAcc > 1:592772/1‑126 (MQ=255) gCCTATCTGTAACGAAGACGTGAACCGTGTTTTTGCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGat < 1:1727658/126‑1 (MQ=255) gCCTATCTGTAACGAAGACGTGAACCGTGTTTTTGCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGat > 2:2409678/1‑126 (MQ=255) ccTATCTGTAACGAAGACGTGAACCGTGTTTTTGCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGata < 1:3399714/126‑1 (MQ=255) tATCTGTAACGAAGACGTGAACCGTGTTTTTGCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGATATc > 1:2473657/1‑126 (MQ=255) tATCTGTAACGAAGACGTGAACCGTGTTTTTGCTGGCCTGCGTG‑AACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGATATCt < 1:3321150/126‑1 (MQ=255) aTCTGTAACGAAGACGTGAACCGTGTTTTTGCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGATATCt > 1:3084341/1‑126 (MQ=255) tCTGTAACGAAGACGTGAACCGTGTTTTTGCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGAGACAGTTATAACCCGGATATCTg < 1:2645076/126‑1 (MQ=255) cTGTAACGAAGACGTGAACCGTGTTTTTGCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGATATCTGc < 1:3316817/126‑1 (MQ=255) cTGTAACGAAGACGTGAACCGTGTTTTTGCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGATATCTGc < 1:309344/126‑1 (MQ=255) cTGTAACGAAGACGTGAACCGTGTTTTTGCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGATATCTGc > 1:1375628/1‑126 (MQ=255) cTGTAACGAAGACGTGAACCGTGTTTTTGCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGATATCTGc < 2:2668851/126‑1 (MQ=255) tGTAACGAAGACGTGAACCGTGTTTTTGCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGATATCTGCg > 1:1896506/1‑126 (MQ=255) gTAACGAAGACGTGAACCGTGTCTTTGCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGATATCTGCGt > 2:2480560/1‑126 (MQ=255) tAACGAAGACGTGAACCGTGTTTTTGCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGATATCTGCGTc < 1:2969803/126‑1 (MQ=255) aaCGAAGACGTGAACCGTGTTTTTGCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGATATCTGCGTCg > 2:2835719/1‑126 (MQ=255) aaCGAAGACGTGAACCGTGTTTTTGCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGATATCTGCGTCg > 1:715576/1‑126 (MQ=255) aaCGAAGACGTGAACCGTGTTTTTGCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGATATCTGCGTCg < 1:2359276/126‑1 (MQ=255) cGAAGACGTGAACCGTGTTTTTGCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGATATCTGCGTCGCa > 2:2191558/1‑126 (MQ=255) gAACCGTGTTTTTGCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGATATCTGCGTCGCAGAGCaaaan < 1:185948/126‑2 (MQ=255) tgtTTTTGCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGATATCTGCGTCGCAGAGCAAAAAGCCtgg > 1:818339/1‑126 (MQ=255) gtTTTTGCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGATATCTGCGTCGCAGAGCAAAAAGCCtgga < 2:327751/126‑1 (MQ=255) ttttGCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGATATCTGCGTCGCAGAGCAAAAAGCCtggatg < 1:1068140/126‑1 (MQ=255) ttttGCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGATATCTGCGTCGCAGAGCAAAAAGCCtggatg > 1:3160155/1‑126 (MQ=255) tttGCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGCATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGATATCTGCGTCGCAGAGCAAAAAGCCtggatgg > 1:1244492/1‑126 (MQ=255) ttGCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGATATCTGCGTCGCAGAGCAAAAAGCCtggatgga < 1:1027838/126‑1 (MQ=255) tGCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGATATCTGCGTCGCAGAGCAAAAAGCCTGGATGGAg > 1:2940698/1‑126 (MQ=255) gCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGATATCTGCGTCGCAGAGCAAAAAGCCTGGATGGAGc < 2:407464/126‑1 (MQ=255) tGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGATATCTGCGTCGCAGAGCAAAAAGCCTGGATGGAGCtt > 2:2572451/1‑126 (MQ=255) tGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGATATCTGCGTCGCAGAGCAAAAAGCCTGGATGGAGCtt < 2:1904599/126‑1 (MQ=255) tGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGATATCTGCGTCGCAGAGCAAAAAGCCTGGATGGAGCtt > 1:438727/1‑126 (MQ=255) tGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGATATCTGCGTCGCAGAGCAAAAAGCCTGGATGGAGCtt < 2:1625492/126‑1 (MQ=255) tGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGATATCTGCGTCGCAGAGCAAAAAGCCTGGATGGAGCtt > 2:1450042/1‑126 (MQ=255) ggCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGATATCTGCGTCGCAGAGCAAAAAGCCTGGATGGAGCTTa < 2:94053/126‑1 (MQ=255) gCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGATATCTGCGTCGCAGAGCAAAAAGCCTGGATGGAGCTTAt < 2:892935/126‑1 (MQ=255) gCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGATATCTGCGTCGCAGAGCAAAAAGCCTGGATGGAGCTTAt > 2:1315695/1‑126 (MQ=255) cTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGATATCTGCGTCGCAGAGCAAACAGCCTGGATGGAGCTTATCg > 2:301625/1‑126 (MQ=255) cTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGATATCTGCGTCGCAGAGCAAAAAGCCTGGATGGAGCTTATCg < 2:3279141/126‑1 (MQ=255) gCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGATATCTGCGTCGCAGAGCAAAAAGCCTGGATGGAGCTTATCGCt < 2:3329499/126‑1 (MQ=255) gCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGATATCTGCGTCGCAGAGCAAAAAGCCTGGATGGAGCTTATCGCt < 1:592816/126‑1 (MQ=255) tGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGATATCTGCGTCGCAGAGCAAAAAGCCTGGATGGAGCTTATCGCTGaa > 1:3163985/1‑126 (MQ=255) gCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGATATCTGCGTCGCAGAGCAAAAAGCCTGGATGGAGCTTATCGCTGAAg < 2:346271/126‑1 (MQ=255) cAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGATATCTGCGTCGCAGAGCAAAAAGCCTGGATGGAGCTTATAGCTGAAGt > 2:2553582/1‑126 (MQ=255) aaCGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGATATCTGCGTCGCAGAGCAAAAAGCCTGGATGGAGCTTATCGCTGAAGTc > 2:1354418/1‑126 (MQ=255) aCGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGATATCTGCGTCGCAGAGCAAAAAGCCTGGATGGAGCTTATCGCTGAAGTCg < 1:3022357/126‑1 (MQ=255) gTGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGATATCTGCGTCGCAGAGCAAAAAGCCTGGATGGAGCTTATCGCTGAAGTCGGt < 2:3043090/126‑1 (MQ=255) tGGGAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGATATCTGCGTCGCAGAGCAAAAAGCCTGGATGGAGCTTATCGCTGAAGTCGGTg < 2:1396787/126‑1 (MQ=255) ggAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGATATCTGCGTCGCAGAGCAAAAAGCCTGGATGGAGCTTATCGCTGAAGTCGGTGGc < 1:1018565/126‑1 (MQ=255) ggAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGATATCTGCGTCGCAGAGCAAAAAGCCTGGATGGAGCTTATCGCTGAAGTCGGTGGc < 1:207077/126‑1 (MQ=255) gAATCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGATATCTGCGTCGCAGAGCAAAAAGCCTGGATGGAGCTTATCGCTGAAGTCGGTGGCg < 1:1063788/126‑1 (MQ=255) aTCAGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGATATCTGCGTCGCAGAGCAAAAAGCCTGGATGGAGCTTATCGCTGAAGTCGGTGGCGaa < 1:1454193/126‑1 (MQ=255) aGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGATATCTGCGTCGCAGAGCAAAAAGCCTGGATGGAGCTTATCGCTGAAGTCGGTGGCGAAGGt > 1:3051353/1‑126 (MQ=255) aGTAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGATATCTGCGTCGCAGAGCAAAAAGCCTGGATGGAGCTTATCGCTGAAGTCGGTGGCGAAGGt < 1:3207930/126‑1 (MQ=255) tAAAAGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGATATCTGCGTCGCAGAGCAAAAAGCCTGGATGGAGCTTATCGCTGAAGTCGGTGGCGAAGGTCa < 1:2731815/126‑1 (MQ=255) aaaaGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGATATCTGCGTCGCAGAGCAAAAAGCCTGGATGGAGCTTATCGCTGAAGTCGGTGGCGAAGGTCAg < 1:150694/126‑1 (MQ=255) aaaaGCCACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGATATCTGCGTCGCAGAGCAAAAAGCCTGGATGGAGCTTATCGCTGAAGTCGGTGGCGAAGGTCAg < 2:3231131/126‑1 (MQ=255) ccACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGATATCTGCGTCGCAGAGCAAAAAGCCTGGATGGAGCTTATCGCTGAAGTCGGTGGCGAAGGTCAGAtttt < 2:2040119/126‑1 (MQ=255) cACCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGATATCTGCGTCGCAGAGCAAAAAGCCTGGATGGAGCTTATCGCTGAAGTCGGTGGCGAAGGTCAGATTTTc > 2:1174068/1‑126 (MQ=255) aCCGGGAATGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGATATCTGCGTCGCAGAGCAAAAAGCCTGGATGGAGCTTATCGCTGAAGTCGGTGGCGAAGGTCAGATTTTCt > 1:3339010/1‑126 (MQ=255) aTGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGATATCTGCGTCGCAGAGCAAAAAGCCTGGATGGAGCTTATCGCTGAAGTCGGTGGCGAAGGTCAGATTTTCTATcgccg < 2:818339/126‑1 (MQ=255) aTGCCAAA‑ACTTTGATGTCTACACTCTTAGTGACAGTTATAACCCGGATATCTGCGTCGCAGAGCAAAAAGCCTGGATGGAGCTTATCGCTGAAGTCGGTGGCGAAGGTCAGATTTTCTATcgccg < 1:1774426/126‑1 (MQ=255) tGCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGATATCTGCGTCGCAGAGCAAAAAGCCTGGATGGAGCTTATCGCTGAAGTCGGTGGCGAAGGTCAGATTTTCTATcgccgc > 2:1055529/1‑126 (MQ=255) gCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGATATCTGCGTCGCAGAGCAAAAAGCCTGGATGGAGCTTATCGCTGAAGTCGGTGGCGAAGGTCAGATTTTCTATcgccgcc < 2:1617754/126‑1 (MQ=255) gCCAAA‑ACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGATATCTGCGTCGCAGAGCAAAAAGCCTGGATGGAGCTTATCGCTGAAGTCGGTGGCGAAGGTCAGATTTTCTATcgccgcc < 1:643217/126‑1 (MQ=255) | ACCATTAAACCCGGAGCATCGCACGGCGTTGATCATGCCTATCTGTAACGAAGACGTGAACCGTGTTTTTGCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAACACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGATATCTGCGTCGCAGAGCAAAAAGCCTGGATGGAGCTTATCGCTGAAGTCGGTGGCGAAGGTCAGATTTTCTATCGCCGCC > CP009273/1107026‑1107267 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |