| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | CP009273 | 3,479,544 | +CAT | coding (66/633 nt) | crp → | cAMP‑activated global transcription factor, mediator of catabolite repression |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3479540 | 0 (0.000) | 184 (1.040) +TCA |
128/236 | 0.1 | 100% | coding (62/633 nt) | crp | cAMP‑activated global transcription factor, mediator of catabolite repression |
| ? | CP009273 | 3479541 = | 0 (0.000) | coding (63/633 nt) | crp | cAMP‑activated global transcription factor, mediator of catabolite repression | |||||
Only 100 of 190 total aligned reads displayed.
GGCAATCCAGAGACAGCGGCGTTATCTGGCTCTGGAGAAAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGTGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCT > CP009273/3479415‑3479665 | ggCAATCCAGAGACAGCGGCGTTATCTGGCTCTGGAGAAAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAACGGTTCTTGTCTCATTGCCACAt < 2:3133363/126‑1 (MQ=255) cAATCCAGAGACAGCGGCGTTATCTGGCTCTGGAGAAAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtc < 1:1147779‑M1/126‑3 (MQ=255) aaTCCAGAGACAGCGGCGTTATCTGGCTCTGGAGAAAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtca < 2:2948745‑M1/126‑4 (MQ=255) aaTCCAGAGACAGCGGCGTTATCTGGCTCTGGAGAAAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtca > 2:2799396‑M1/1‑123 (MQ=255) aTCCAGAGACAGCGGCGTTATCTGGCTCTGGAGAAAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcat > 1:1731319‑M1/1‑122 (MQ=255) tCCAGAGACAGCGGCGTTATCTGGCTCTGGAGAAAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatc > 1:477212‑M1/1‑121 (MQ=255) ccAGAGACAGCGGCGTTATCTGGCTCTGGAGAAAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatca < 1:1832802‑M1/126‑7 (MQ=255) aCAGCGGCGTTATCTGGCTCTGGAGAAAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagta > 1:2093428‑M1/1‑114 (MQ=255) gcggcgTTATCTGGCTCTGGAGAAAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtaccc < 2:334897‑M1/126‑16 (MQ=255) cgTTATCTGGCTCTGGAGAAAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatcc < 1:1295809‑M1/126‑20 (MQ=255) cgTTATCTGGCTCTGGAGAAAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatcc < 1:1263724‑M1/126‑20 (MQ=255) cgTTATCTGGCTCTGGAGAAAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatcc > 1:3112929‑M1/1‑107 (MQ=255) tATCTGGCTCTGGAGAAAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaag > 1:3269319‑M1/1‑104 (MQ=255) tATCTGGCTCTGGAGAAAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcancataagtacccatccaag > 1:2092536‑M1/1‑104 (MQ=255) aTCTGGCTCTGGAGAAAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaaga < 2:2556036‑M1/126‑24 (MQ=255) tCTGGCTCTGGAGAAAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagag > 1:2542073‑M1/1‑102 (MQ=255) cTGGCTCTGGAGAAAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagc < 2:3396446‑M1/126‑26 (MQ=255) ggAGAAAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttat < 1:2952719‑M1/126‑34 (MQ=255) ggAGAAAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttat < 1:883254‑M1/126‑34 (MQ=255) gagaAAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttatt < 1:188823‑M1/126‑35 (MQ=255) gagaAAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttatt < 2:2285269‑M1/126‑35 (MQ=255) agaAAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattc < 2:2894061‑M1/126‑36 (MQ=255) agaAAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattc > 1:651712‑M1/1‑91 (MQ=255) agaAAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattc > 1:3243651‑M1/1‑91 (MQ=255) gaAAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattca > 2:1213143‑M1/1‑90 (MQ=255) aaaGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcac > 1:1593249‑M1/1‑89 (MQ=255) aaaGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcac > 1:706475‑M1/1‑89 (MQ=255) aaaGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcac < 2:369045‑M1/126‑38 (MQ=255) aGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcacca < 1:2158713‑M1/126‑40 (MQ=255) gCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcaccag > 2:2916347‑M1/1‑86 (MQ=255) gCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcaccag > 2:2443055‑M1/1‑86 (MQ=255) cTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcaccagg < 1:2765751‑M1/126‑42 (MQ=255) ttATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcaccaggg < 1:604178‑M1/126‑43 (MQ=255) aaCAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcaccagggtgaa < 2:1792027‑M1/126‑47 (MQ=255) cAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcaccagggtgaaaa > 2:543122‑M1/1‑78 (MQ=255) agagGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGGATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcaccagggtgaaaaa > 2:1516453‑M1/1‑77 (MQ=255) agagGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcaccagggtgaaaaa < 1:1456303‑M1/126‑50 (MQ=255) agagGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcaccagggtgaaaaa > 1:744868‑M1/1‑77 (MQ=255) gagGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcaccagggtgaaaaag < 2:3245875‑M1/126‑51 (MQ=255) gATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcaccagggtgaaaaagcgg < 1:2298109‑M1/126‑54 (MQ=255) aaCCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcaccagggtgaaaaagcggaaa < 1:2891949‑M1/126‑57 (MQ=255) aaCCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcaccagggtgaaaaagcggaaa < 1:2410395‑M1/126‑57 (MQ=255) aaCCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcaccagggtgaaaaagcggaaa > 1:2448999‑M1/1‑70 (MQ=255) aCCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcaccagggtgaaaaagcggaaac < 1:1074001‑M1/126‑58 (MQ=255) cgcgCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtaccgatccaagagcacgcttattcaccagggtgaaaaagcggaaacgc > 2:2886017‑M1/1‑67 (MQ=255) cgcgCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatacaagagcacgcttattcaccagggtgaaaaagcggaaacgc > 2:2007877‑M1/1‑67 (MQ=255) gcgcATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcaccagggtgaaaaagcggaaacgct > 2:34746‑M1/1‑66 (MQ=255) agcaTGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcaccagggagaaaaagcggaaacgctg > 2:3289541‑M1/2‑65 (MQ=255) gcATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcaccagggtgaaaaagcggaaacgctgt > 2:2155643‑M1/1‑64 (MQ=255) gcATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcaccagggtgaaaaagcggaaacgctgt < 1:3124129‑M1/126‑63 (MQ=255) cATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcaccagggtgaaaaagcggaaacgctgta < 1:1514073‑M1/126‑64 (MQ=255) cATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcaccagggtgaaaaagcggaaacgctgta > 2:1245310‑M1/1‑63 (MQ=255) gTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcaccagggtgaaaaagcggaaacgctgtactac > 2:241782‑M1/1‑59 (MQ=255) cTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcaccagggtgaaaaagcggaaacgctgtactacatc > 2:552212‑M1/1‑56 (MQ=255) ttGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcaccagggtgaaaaagcggaaacgctgtactacatcg > 2:1463361‑M1/1‑55 (MQ=255) ggCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcaccagggtgaaaaagcggaaacgctgtactacatcgtt < 2:1090676‑M1/126‑74 (MQ=255) aaaCCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcaccagggtgaaaaagcggaaacgctgtactacatcgttaaa < 1:1010872‑M1/126‑77 (MQ=255) aaCCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcaccagggtgaaaaagcggaaacgctgtactacatcgttaaag > 2:2222899‑M1/1‑49 (MQ=255) aaCCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcaccagggtgaaaaagcggaaacgctgtactacatcgttaaag < 2:417454‑M1/126‑78 (MQ=255) ccGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcaccagggtgaaaaagcggaaacgctgtactacatcgttaaaggc < 1:418265‑M1/126‑80 (MQ=255) cGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcaccagggtgaaaaagcggaaacgctgtactacatcgttaaaggct > 2:937980‑M1/1‑46 (MQ=255) aaaCAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcaccagggtgaaaaagcggaaacgctgtactacatcgttaaaggctctg < 1:1213143‑M1/126‑84 (MQ=255) aCAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcaccagggtgaaaaagcggaaacgctgtactacatcgttaaaggctctgtg < 1:499205‑M1/126‑86 (MQ=255) aCAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcaccagggtgaaaaagcggaaacgctgtactacatcgttaaaggctctgtg < 1:2042519‑M1/126‑86 (MQ=255) aCAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcaccagggtgaaaaagcggaaacgctgtactacatcgttaaaggctctgtg < 2:86885‑M1/126‑86 (MQ=255) aCAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcaccagggtgaaaaagcggaaacgctgtactacatcgttaaaggctctgtg < 2:27059‑M1/126‑86 (MQ=255) aCAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcaccagggtgaaaaagcggaaacgctgtactacatcgttaaaggctctgtg < 2:1210757‑M1/126‑86 (MQ=255) aCAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcaccagggtgaaaaagcggaaacgctgtactacatcgttaaaggctctgtg < 2:1386044‑M1/126‑86 (MQ=255) aCAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcaccagggtgaaaaagcggaaacgctgtactacatcgttaaaggctctgtg < 2:1974712‑M1/126‑86 (MQ=255) cAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcaccagggtgaaaaagcggaaacgctgtactacatcgttaaaggctctgtgg < 1:3292342‑M1/126‑87 (MQ=255) cccGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcaccagggtgaaaaagcggaaacgctgtactacatcgttaaaggctctgtggcagt > 2:1852821‑M1/1‑36 (MQ=255) cGACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcaccagggtgaaaaagcggaaacgctgtactacatcgttaaaggctctgtggcagtgc > 2:501668‑M1/1‑34 (MQ=255) gACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcaccagggtgaaaaagcggaaacgctgtactacatcgttaaaggctctgtggcagtgct > 1:1974758‑M1/1‑33 (MQ=255) gACTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcaccagggggaaaaagcggaaacgctgtactacatcgttaaaggctctgtggcagtgct > 2:1747627‑M1/1‑33 (MQ=255) aCTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcaccagggtgaaaaagcggaaacgctgtactacatcgttaaaggctctgtggcagtgctg > 2:3279534‑M1/1‑32 (MQ=255) aCTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcaccagggtgaaaaagcggaaacgctgtactacatcgttaaaggctctgtggcagtgctg < 1:1769335‑M1/126‑95 (MQ=255) aCTCTCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcaccagggtgaaaaagcggaaacgctgtactacatcgttaaaggctctgtggcagtgctg < 2:1593249‑M1/126‑95 (MQ=255) ctctCGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcaccagggtgaaaaagcggaaacgctgtactacatcgttaaaggctctgtggcagtgctga > 1:1419915‑M1/1‑31 (MQ=255) tctcGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcaccagggtgaaaaagcggaaacgctgtactacatcgttaaaggctctgtggcagtgctgat < 2:1776255‑M1/126‑97 (MQ=255) tctcGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcaccagggtgaaaaagcggaaacgctgtactacatcgttaaaggctcagtggcagtgctgat < 1:388173‑M1/126‑97 (MQ=255) tcGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcaccagggtgaaaaagcggaaacgctgtactacatcgttaaaggctctgtggcagtgctgatca > 2:1368782‑M1/1‑28 (MQ=255) cGAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcaccagggtgaaaaagcggaaacgctgtactacatcgttaaaggctctgtggcagtgctgatcaa > 2:1327399‑M1/1‑27 (MQ=255) gAATGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcaccagggtgaaaaagcggaaacgctgtactacatcgttaaaggctctgtggcagtgctgatcaaa < 2:651712‑M1/126‑101 (MQ=255) aaTGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcaccagggtgaaaaagcggaaacgctgtactacatcgttaaaggctctgtggcagtgctgatcaaag < 1:1511520‑M1/126‑102 (MQ=255) aaTGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcaccagggtgaaaaagcggaaacgctgtactacatcgttaaaggctctgtggcagtgctgatcaaag < 1:2916347‑M1/126‑102 (MQ=255) tGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcaccagggtgaaaaagcggaaacgctgtactacatcgttaaaggctctgtggcagtgctgatcaaagac < 1:3003949‑M1/126‑104 (MQ=255) tGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcaccagggtgaaaaagcggaaacgctgtactacatcgttaaaggctctgtggcagtgctgatcaaagac < 2:3215349‑M1/126‑104 (MQ=255) tGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcaccagggtgaaaaagcggaaacgctgtactacatcgttaaaggctctgtggcagtgctgatcaaagac < 2:3112929‑M1/126‑104 (MQ=255) tGGTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcaccagggtgaaaaagcggaaacgctgtactacatcgttaaaggctctgtggcagtgctgatcaaagac < 2:1159754‑M1/126‑104 (MQ=255) gTTCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcaccagggtgaaaaagcggaaacgctgtactacatcgttaaaggctctgtggcagtgctgatcaaagacga > 2:2303397‑M1/1‑21 (MQ=255) ttCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcaccagggtgaaaaagcggaaacgctgtactacatcgttaaaggctctgtggcagtgctgatcaaagacgaa > 1:1482913‑M1/1‑20 (MQ=255) tCTTGTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcaccagggtgaaaaagcggaaacgctgtactacatcgttaaaggctctgtggcagtgctgatcaaagacgaag > 2:3041387‑M1/1‑19 (MQ=255) gTCTCATTGCCACATtcatcataagtacccatccaagagcacgcttattcaccagggtgaaaaagcggaaacgctgtactacatcgttaaaggctctgtggcagtgctgatcaaagacgaagaggg < 2:398466‑M1/126‑112 (MQ=255) tGCCACATtcatcataagtacccatccaagagcacgcttattcaccagggtgaaaaagcggaaacgctgtactacatcgttaaaggctctgtggcagtgctgatcaaagacgaagagggtaaagaa < 2:1820625‑M1/126‑119 (MQ=255) gCCACATtcatcataagtacccatccaagagcacgcttattcaccagggtgaaaaagcggaaacgctgtactacatcgttaaaggctctgtggcagtgctgatcaaagacgaagagggtaaagaaa > 1:2692557‑M1/1‑7 (MQ=255) ccACATtcatcataagtacccatccaagagcacgcttattcaccagggtgaaaaagtggaaacgctgtactacatcgttaaaggctctgtggcagtgctgatcaaagacgaagagggtaaagaaat < 2:2852330‑M1/126‑121 (MQ=255) ccACATtcatcataagtacccatccaagagcacgcttattcaccagggtgaaaaagcggaaacgctgtactacatcgttaaaggctctgtggcagtgctgatcaaagacgaagagggtaaagaaat < 1:961264‑M1/126‑121 (MQ=255) cacaTtcatcataagtacccatccaagagcacgcttattcaccagggtgaaaaagcggaaacgctgtactacatcgttaaaggctctgtggcagtgctgatcaaagacgaagagggtaaagaaatg < 1:1245310‑M1/126‑122 (MQ=255) aTtcatcataagtacccatccaagagcacgcttattcaccagggtgaaaaagcggaaacgctgtactacatcgttaaaggctctgtggcagtgctgatcaaagacgaagagggtaaagaaatgatc < 1:2082920‑M1/126‑125 (MQ=255) ttcatcataagtacccatccaagagcacgcttattcaccagggtgaaaaagcggaaacgctgtactacatcgttaaaggctctgtggcagtgctgatcaaagacgaagagggtaaagaaatgatcc < 2:581292‑M1/126‑126 (MQ=255) | GGCAATCCAGAGACAGCGGCGTTATCTGGCTCTGGAGAAAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGTGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCT > CP009273/3479415‑3479665 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |