BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP009273	1,782,213	C→T	A171V (GCA→GTA)	ppsR →	bifunctional regulatory protein: PEP synthase kinase and PEP synthase pyrophosphorylase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP009273	1,782,213	0	C	T	100.0%	592.4 / NA	154	A171V (GCA→GTA)	ppsR	bifunctional regulatory protein: PEP synthase kinase and PEP synthase pyrophosphorylase
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (77/77); total (77/77)

Only 100 of 155 total aligned reads displayed.

TGCGGCGATTGATTACACCCTCGCCCACGATGACGGCATTTCGTTGCGCAATCTGGACCAGGCTCAGGTGATCCTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGCAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCCGACGATATGGATAATCTGGTGCTACCCGCGTCGCTCAAACCGCTTCAGCATAAATTGTTCGGCCTGACTATCGACCCGG  >  CP009273/1782091‑1782335

tGCGGCGATTGATTACACCCTCGCCCACGATGACGGCATTTCGTTGCGCAATCTGGACCAGGCTCAGGTGATCCTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAAt                                                                                                                         <  2:1271934/126‑1 (MQ=255)

   ggcgATTGATTACACCCTCGCCCACGATGACGGCATTTCGTTGCGCAATCTGGACCAGGCTCAGGTGATCCTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCa                                                                                                                      >  1:1078324/1‑126 (MQ=255)

   ggcgATTGATTACACCCTCGCCCACGATGACGGCATTTCGTTGCGCAATCTGGACCAGGCTCAGGTGATCCTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCa                                                                                                                      <  2:514600/126‑1 (MQ=255)

    gcgATTGATTACACCCTCGCCCACGATGACGGCATTTCGTTGCGCAATCTGGACCAGGCTCAGGTGATCCTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAg                                                                                                                     <  2:2743421/126‑1 (MQ=255)

    gcgATTGATTACACCCTCGCCCACGATGACGGCATTTCGTTGCGCAATCTGGACCAGGCTCAGGTGATCCTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAg                                                                                                                     <  2:1306955/126‑1 (MQ=255)

    gcgATTGATTACACCCTCGCCCACGATGACGGCATTTCGTTGCGCAATCTGGACCAGGCTCAGGTGATCCTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAg                                                                                                                     <  1:120903/126‑1 (MQ=255)

     cgATTGATTACACCCTCGCCCACGATGACGGCATTTCGTTGCGCAATCTGGACCAGGCTCAGGTGATCCTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGt                                                                                                                    >  2:591720/1‑126 (MQ=255)

     cgATTGATTACACCCTCGCCCACGATGACGGCATTTCGTTGCGCAATCTGGACCAGGCTCAGGTGATCCTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGt                                                                                                                    <  2:2157292/126‑1 (MQ=255)

     cgATTGATTACACCCTCGCCCACGATGACGGCATTTCGTTGCGCAATCTGGACCAGGCTCAGGTGATCCTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGt                                                                                                                    <  2:2350584/126‑1 (MQ=255)

      gattgattACACCCTCGCCCACGATGACGGCATTTCGTTGCGCAATCTGGACCAGGCTCAGGTGATCCTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGtt                                                                                                                   <  2:1506517/126‑1 (MQ=255)

      gattgattACACCCTCGCCCACGATGACGGCATTTCGTTGCGCAATCTGGACCAGGCTCAGGTGATCCTGCTCGGTGGTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGtg                                                                                                                   >  2:92464/1‑125 (MQ=255)

      gattgattACACCCTCGCCCACGATGACGGCATTTCGTTGCGCAATCTAGACCAGGCTCAGGTGATCCTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGCTAATGCAGtt                                                                                                                   >  2:658188/1‑126 (MQ=255)

       attgattACACCCTCGCCCACGATGACGGCATTTCGTTGCGCAATCTGGACCAGGCTCAGGTGATCCTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGttt                                                                                                                  >  1:2766682/1‑126 (MQ=255)

       attgattACACCCTCGCCCACGATGACGGCATTTCGTTGCGCAATCTGGACCAGGCTCAGGTGATCCTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGttt                                                                                                                  >  2:1961183/1‑126 (MQ=255)

        ttgattACACCCTCGCCCACGATGACGGCATTTCGTTGCGCAATCTGGACCAGGCTCAGGTGATCCTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTg                                                                                                                 <  1:1976200/126‑1 (MQ=255)

          gattACACCCTCGCCCACGATGACGGCATTTCGTTGCGCAATCTGGACCAGGCTCAGGTGATCCTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGt                                                                                                               <  2:2846995/126‑1 (MQ=255)

           attACACCCTCGCCCACGATGACGGCATTTCGTTGCGCAATCTGGACCAGGCTCAGGTGATCCTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTa                                                                                                              <  2:1640453/126‑1 (MQ=255)

               cacCCTCGCCCACGATGACGGCATTTCGTTGCGCAATCTGGACCAGGCTCAGGTGATCCTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCcg                                                                                                          >  2:2441793/1‑126 (MQ=255)

               cacCCTCGCCCACGATGACGGCATTTCGTTGCGCAATCTGGACCAGGCTCAGGTGATCCTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCcg                                                                                                          <  2:1655021/126‑1 (MQ=255)

               cacCCTCGCCCACGATGACGGCATTTCGTTGCGCAATCTGGACCAGGCTCAGGTGATCCTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCcg                                                                                                          <  1:1414797/126‑1 (MQ=255)

                  ccTCGCCCACGATGACGGCATTTCGTTGCGCAATCTGGACCAGGCTCAGGTGATCCTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCcgcgc                                                                                                       >  1:1835491/1‑126 (MQ=255)

                   cTCGCCCACGATGACGGCATTTCGTTGCGCAATCTGGACCAGGCTCAGGTGATCCTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCcgcgcg                                                                                                      <  1:2690031/126‑1 (MQ=255)

                   cTCGCCCACGATGACGGCATTTCGTTGCGCAATCTGGACCAGGCTCAGGTGATCCTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCcgcgcg                                                                                                      <  1:1087384/126‑1 (MQ=255)

                   cTCGCCCACGATGACGGCATTTCGTTGCGCAATCTGGACCAGGCTCAGGTGATCCTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCcgcgcg                                                                                                      <  2:3076731/126‑1 (MQ=255)

                    tCGCCCACGATGACGGCATTTCGTTGCGCAATCTGGACCAGGCTCAGGTGATCCTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCgg                                                                                                     >  2:2526787/1‑126 (MQ=255)

                      gCCCACGATGACGGCATTTCGTTGCGCAATCTGGACCAGGCTCAGGTGATCCTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCa                                                                                                   <  2:1920524/126‑1 (MQ=255)

                      gCCCACGATGACGGCATTTCGTTGCGCAATCTGGACCAGGCTCAGGTGATCCTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCa                                                                                                   >  1:3225733/1‑126 (MQ=255)

                       cccACGATGACGGCATTTCGTTGCGCAATCTGGACCAGGCTCAGGTGATCCTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCaa                                                                                                  >  2:735746/1‑126 (MQ=255)

                         cACGATGACGGCATTTCGTTGCGCAATCTGGACCAGGCTCAGGTGATCCTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAAc                                                                                                <  2:1714950/126‑1 (MQ=255)

                         cACGATGACGGCATTTCGTTGCGCAATCTGGACCAGGCTCAGGTGATCCTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAAc                                                                                                <  2:1593964/126‑1 (MQ=255)

                          aCGATGACGGCATTTCGTTGCGCAATCTGGACCAGGCTCAGGTGATCCTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACt                                                                                               <  2:3326866/126‑1 (MQ=255)

                           cGATGACGGCATTTCGTTGCGCAATCTGGACCAGGCTCAGGTGATCCTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTa                                                                                              >  1:2807029/1‑126 (MQ=255)

                                  ggCATTTCGTTGCGCAATCTGGACCAGGCTCAGGTGATCCTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCttt                                                                                       <  2:942080/126‑1 (MQ=255)

                                   gCATTTCGTTGCGCAATCTGGACCAGGCTCAGGTGATCCTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTa                                                                                      >  1:3281440/1‑126 (MQ=255)

                                    cATTTCGTTGCGCAATCTGGACCAGGCTCAGGTGATCCTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTAt                                                                                     <  2:777398/126‑1 (MQ=255)

                                     aTTTCGTTGCGCAATCTGGACCAGGCTCAGGTGATCCTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTAtt                                                                                    <  1:2559777/126‑1 (MQ=255)

                                         cGTTGCGCAATCTGGACCAGGCTCAGGTGATCCTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCcg                                                                                >  1:1462842/1‑126 (MQ=255)

                                         cGTTGCGCAATCTGGACCAGGCTCAGGTGATCCTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCcg                                                                                <  2:413234/126‑1 (MQ=255)

                                           ttGCGCAATCTGGACCAGGCTCAGGTGATCCTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCcgac                                                                              >  1:564359/1‑126 (MQ=255)

                                            tGCGCAATCTGGACCAGGCTCAGGTGATCCTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCcgacg                                                                             <  2:1189869/126‑1 (MQ=255)

                                             gcgcAATCTGGACCAGGCTCAGGTGATCCTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCcgacga                                                                            <  1:2151346/126‑1 (MQ=255)

                                              cgcAATCTGGACCAGGCTCAGGTGATCCTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCCGACGat                                                                           >  1:1349134/1‑126 (MQ=255)

                                                cAATCTGGACCAGGCTCAGGTGATCCTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCCGACGatat                                                                         <  1:479973/126‑1 (MQ=255)

                                                 aaTCTGGACCAGGCTCAGGTGATCCTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCCGACGATATg                                                                        >  1:2571111/1‑126 (MQ=255)

                                                    cTGGACCAGGCTCAGGTGATCCTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCCGACGATATGGAt                                                                     >  2:1839981/1‑126 (MQ=255)

                                                    cTGGACCAGGCTCAGGTGATCCTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCCGACGATATGGAt                                                                     <  2:2888356/126‑1 (MQ=255)

                                                     tGGACCAGGCTCAGGTGATCCTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCCGACGATATGGATa                                                                    >  1:1920507/1‑126 (MQ=255)

                                                      ggACCAGGCTCAGGTGATCCTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCCGACGATATGGATaa                                                                   >  2:2203314/1‑126 (MQ=255)

                                                       gACCAGGCTCAGGTGATCCTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCCGACGATATGGATAAt                                                                  <  1:191755/126‑1 (MQ=255)

                                                          cAGGCTCAGGTGATCCTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCCGACGATATGGATAATCTg                                                               >  1:2416059/1‑126 (MQ=255)

                                                          cAGGCTCAGGTGATCCTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCCGACGATATGGATAATCTg                                                               >  2:3231196/1‑126 (MQ=255)

                                                            ggCTCAGGTGATCCTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCCGACGATATGGATAATCTGGt                                                             >  2:2384027/1‑126 (MQ=255)

                                                               tCAGGTGATCCTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCCGACGATATGGATAATCTGGTGCt                                                          >  1:563974/1‑126 (MQ=255)

                                                                cAGGTGATCCTTCTCGGTTTTTCTCGCGGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCTGGAAAGTACCCCTTTATTGCCGACGATATGGATAATCGGGTGCTa                                                         <  2:2737261/126‑1 (MQ=255)

                                                                cAGGTGATCCTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCCGACGATATGGATAATCTGGTGCTa                                                         <  2:1078324/126‑1 (MQ=255)

                                                                cAGGTGATCCTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCCGACGATATGGATAATCTGGTGCTa                                                         <  2:457196/126‑1 (MQ=255)

                                                                cAGGTGATCCTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCCGACGATATGGATAATCTGGTGCTa                                                         <  2:3030752/126‑1 (MQ=255)

                                                                     gATCCTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCCGACGATATGGATAATCTGGTGCTACCcgc                                                    >  2:1773724/1‑126 (MQ=255)

                                                                       tCCTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCCGACGATATGGATAATCTGGTGCTACCCGCGt                                                  <  2:2523488/126‑1 (MQ=255)

                                                                        ccTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCCGACGATATGGATAATCTGGTGCTACCCGCGTc                                                 <  2:3350526/126‑1 (MQ=255)

                                                                        ccTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCCGACGATATGGATAATCTGGTGCTACCCGCGTc                                                 <  2:964052/126‑1 (MQ=255)

                                                                         cTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCCGACGATATGGATAATCTGGTGCTACCCGCGTCg                                                <  2:1414955/126‑1 (MQ=255)

                                                                           gCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCCGACGATATGGATAATCTGGTGCTACCCGCGTCGCt                                              <  2:1360053/126‑1 (MQ=255)

                                                                            cTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCCGACGATATGGATAATCTCGTGCTACCCGCGTCGCTc                                             <  1:2902062/126‑1 (MQ=255)

                                                                             tCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCCGACGATATGGATAATCTGGTGCTACCCGCGTCGCTCa                                            >  1:1642750/1‑126 (MQ=255)

                                                                             tCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCCGACGATATGGATAATCTGGTGCTACCCGCGTCGCTCa                                            >  1:2893665/1‑126 (MQ=255)

                                                                             tCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCCGACGATATGGATAATCTGGTGCTACCCGCGTCGCTCa                                            >  1:3046233/1‑126 (MQ=255)

                                                                              cGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCCGACGATATGGATAATCTGGTGCTACCCGCGTCGCTCaa                                           >  2:2234061/1‑126 (MQ=255)

                                                                               ggTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCCGACGATATGGATAATCTGGTGCTACCCGCGTCGCTCaaa                                          <  2:1938165/126‑1 (MQ=255)

                                                                                 tgtTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCCGACGATATGGATAATCTGGTGCTACCCGCGTCGCTCAAAcc                                        >  2:3396253/1‑126 (MQ=255)

                                                                                 tgtTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCCGACGATATGGATAATCTGGTGCTACCCGCGTCGCTCAAAcc                                        <  2:794427/126‑1 (MQ=255)

                                                                                  gtTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCCGACGATATGGATAATCTGGTGCTACCCGCGTCGCTCAAACCg                                       >  1:2692293/1‑126 (MQ=255)

                                                                                  gtTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCCGACGATATGGATAATCTGGTGCTACCCGCGTCGCTCAAACCg                                       >  2:300095/1‑126 (MQ=255)

                                                                                   tttCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCCGACGATATGGATAATCTGGTGCTACCCGCGTCGCTCAAACCGc                                      >  2:2979814/1‑126 (MQ=255)

                                                                                     tctcGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCCGACGATATGGATAATCTGGTGCTACCCGCGTCGCTCAAACCGCtt                                    <  1:440900/126‑1 (MQ=255)

                                                                                      ctcGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCCGACGATATGGATAATCTGGTGCTACCCGCGTCGCTCAAACCGCTTc                                   >  2:2274301/1‑126 (MQ=255)

                                                                                        cGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCCGACGATATGGATAATCTGGTGCTACCCGCGTCGCTCAAACCGCTTCAg                                 <  2:2571111/126‑1 (MQ=255)

                                                                                        cGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCCGACGATATGGATAATCTGGTGCTACCCGCGTCGCTCAAACCGCTTCAg                                 <  1:208853/126‑1 (MQ=255)

                                                                                          cTGTGGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCCGACGATATGGATAATCTGGTGCTACCCGCGTCGCTCAAACCGCTTCAGCa                               >  2:27816/1‑126 (MQ=255)

                                                                                            gtgGTAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCCGACGATATGGATAATCTGGTGCTACCCGCGTCGCTCAAACCGCTTCAGCATa                             >  1:1381630/1‑126 (MQ=255)

                                                                                                tAAAACCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCCGACGATATGGATAATCTGGTGCTACCCGCGTCGCTCAAACCGCTTCAGCATAAAtt                         >  1:2346305/1‑126 (MQ=255)

                                                                                                  aaaCCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCCGACGATATGGATAATCTGGTGCTACCCGCGTCGCTCAAACCGCTTCAGCATAAATTGt                       >  1:1482567/1‑126 (MQ=255)

                                                                                                    aCCCCCACCAGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCCGACGATATGGATAATCTGGTGCTACCCGCGTCGCTCAAACCGCTTCAGCATAAATTGTTc                     >  1:1833764/1‑126 (MQ=255)

                                                                                                     cccccACCAGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCCGACGATATGGATAATCTGGTGCTACCCGCGTCGCTCAAACCGCTTCAGCATAAATTGTTCg                    >  2:2411616/1‑126 (MQ=255)

                                                                                                      ccccACCAGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCCGACGATATGGATAATCTGGTGCTACCCGCGTCGCTCAAACCGCTTCAGCATAAATTGTTCgg                   >  1:2071954/1‑126 (MQ=255)

                                                                                                      ccccACCAGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCCGACGATATGGATAATCTGGTGCTACCAGCGTCGCTCAAACCGCTTCAGCATAAATTGTTCgg                   <  2:3420673/126‑1 (MQ=255)

                                                                                                        ccaccaGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCCGACGATATGGATAATCTGGTGCTACCCGCGTCGCTCAAACCGCTTCAGCATAAATTGTTCGGcc                 >  1:1600503/1‑126 (MQ=255)

                                                                                                          accaGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCCGACGATATGGATAATCTGGTGCTACCCGCGTCGCTCAAACCGCTTCAGCATAAATTGTTCGGCCTg               <  2:550759/126‑1 (MQ=255)

                                                                                                          accaGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCCGACGATATGGATAATCTGGTGCTACCCGCGTCGCTCAAACCGCTTCAGCATAAATTGTTCGGCCTg               >  1:3150252/1‑126 (MQ=255)

                                                                                                           ccaGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCCGACGATATGGATAATCTGGTGCTACCCGCGTCGCTCAAACCGCTTCAGCATAAATTGTTCGGCCTGa              <  2:3077703/126‑1 (MQ=255)

                                                                                                           ccaGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCCGACGATATGGATAATCTGGTGCTACCCGCGTCGCTCAAACCGCTTCAGCATAAATTGTTCGGCCTGa              <  1:735746/126‑1 (MQ=255)

                                                                                                             aatCTGTATCTGGTAAGGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCCGACGATATGGATAATCTGGTGCTACCCGCGTCGCTCAAACCGCTTCAGCATAAATTGTTCGGCCTGACt            <  2:3163411/124‑1 (MQ=255)

                                                                                                             aGTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCCGACGATATGGATAATCTGGTGCTACCCGCGTCGCTCAAACCGCTTCAGCATAAATTGTTCGGCCTGACt            >  2:3004039/1‑126 (MQ=255)

                                                                                                              gTCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCCGACGATATGGATAATCTGGTGCTACCCGCGTCGCTCAAACCGCTTCAGCATAAATTGTTCGGCCTGACTa           >  2:1524543/1‑126 (MQ=255)

                                                                                                               tCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCCGACGATATGGATAATCTGGTGCTACCCGCGTCGCTCAAACCGCTTCAGCATAAATTGTTCGGCCTGACTAt          >  2:2446036/1‑126 (MQ=255)

                                                                                                               tCTGTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCCGACGATATGGATAATCTGGTGCTACCCGCGTCGCTCAAACCGCTTCAGCATAAATTGTTCGGCCTGACTAt          <  1:910662/126‑1 (MQ=255)

                                                                                                                  gTATCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCCGACGATATGGATAATCTGGTGCTACCCGCGTCGCTCAAACCGCTTCAGCATAAATTGTTCGGCCTGACTATCGa       >  1:3283937/1‑126 (MQ=255)

                                                                                                                     tCTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCCGACGATATGGATAATCTGGTGCTACCCGCGTCGCTCAAACCGCTTCAGCATAAATTGTTCGGCCTGACTATCGAccc    >  1:1723386/1‑126 (MQ=255)

                                                                                                                      cTGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCCGACGATATGGATAATCTGGTGCTACCCGCGTCGCTCAAACCGCTTCAGCATAAATTGTTCGGCCTGACTATCGACCCg   >  1:1989598/1‑126 (MQ=255)

                                                                                                                       tGGTAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCCGACGATATGGATAATCTGGTGCTACCCGCGTCGCTCAAACCGCTTCAGCATAAATTGTTCGGCCTGACTATCGACCCgg  <  2:1115562/126‑1 (MQ=255)

TGCGGCGATTGATTACACCCTCGCCCACGATGACGGCATTTCGTTGCGCAATCTGGACCAGGCTCAGGTGATCCTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGCAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCCGACGATATGGATAATCTGGTGCTACCCGCGTCGCTCAAACCGCTTCAGCATAAATTGTTCGGCCTGACTATCGACCCGG  >  CP009273/1782091‑1782335

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`