| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009273 | 4,087,148 | G→A | pseudogene (203/543 nt) | rhaD ← | pseudogene, truncated, rhamnulose‑phosphate aldolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,087,148 | 0 | G | A | 99.3% | 513.0 / NA | 137 | pseudogene (203/543 nt) | rhaD | pseudogene, truncated, rhamnulose‑phosphate aldolase |
| Reads supporting (aligned to +/- strand): ref base G (1/0); new base A (59/76); total (61/76) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.41e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 137 total aligned reads displayed.
TTTTGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCACCCGATCTTTGCCGTTGGTGGCTTTAATGCGCTCGCAGTGGGAAAGGAAG > CP009273/4087025‑4087270 | ttttGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATg < 1:1183673/126‑1 (MQ=255) tttGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGa > 1:3169929/1‑126 (MQ=255) tttGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGa < 1:364083/126‑1 (MQ=255) tGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAg < 1:136485/126‑1 (MQ=255) gCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGa < 2:2020921/126‑1 (MQ=255) cATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCCGGGCACCATCCACGGCAAAATGCCAACGCCCTCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGAc > 1:1448482/1‑126 (MQ=255) cATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGAc > 1:2514086/1‑126 (MQ=255) cATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCCGGGCACCATCCACGGC‑AAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGAcc < 2:682660/126‑1 (MQ=255) tctcTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACcg < 1:2678911/126‑1 (MQ=255) ctctTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACcgc < 1:708754/126‑1 (MQ=255) ctctTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACcgc > 1:921643/1‑126 (MQ=255) ctctTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACcgc < 1:1801980/126‑1 (MQ=255) tctTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACcgcg > 2:872410/1‑126 (MQ=255) ctTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCgg > 2:1512606/1‑126 (MQ=255) ttGTGCGGTCGCCTGGCCGATTTCGTCCGTGCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGgt > 2:426076/1‑126 (MQ=255) tgtgCGGTCGCCTGGCCGATTTCGTCCGTGCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGgtg > 2:2473559/1‑126 (MQ=255) gTCGCCTGGCCGATTTCGTCCGTGCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGttt > 2:1359382/1‑126 (MQ=255) tCGCCTGGCCGATTTCGTCCGTGCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGtttt < 1:1697274/126‑1 (MQ=255) tCGCCTGGCCGATTTCGTCCGTGCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGtttt < 2:1281157/126‑1 (MQ=255) cGCCTGGCCGATTTCGTCCGTGCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTc > 2:2973106/1‑126 (MQ=255) ccTGGCCGATTTCGTCCGTGCCGGGCACCATCCACGGCAAAATGCCAAAGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCaa < 2:2785234/126‑1 (MQ=255) tGGCCGATTTCGTCCGTGCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGt > 1:889549/1‑126 (MQ=255) gCCGATTTCGTCCGTGCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGTAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTAc < 1:2858541/126‑1 (MQ=255) gCCGATTTCGTCCGTGCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTAc < 2:2177600/126‑1 (MQ=255) ccGATTTCGTCCGTGCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACa < 2:1991560/126‑1 (MQ=255) aTTTCGTCCGTGCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAg < 1:2396206/126‑1 (MQ=255) tttCGTCCGTGCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAgg > 2:2933998/1‑126 (MQ=255) tCGTCCGTGCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTg > 1:1609299/1‑126 (MQ=255) cGTCCGTGCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGa < 2:2119437/126‑1 (MQ=255) cGTCCGTGCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGa < 2:399786/126‑1 (MQ=255) gTCCGTGCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAg > 2:56048/1‑126 (MQ=255) tCCGTGCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAgg < 2:1667550/126‑1 (MQ=255) tCCGTGCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAgg < 1:936501/126‑1 (MQ=255) tCCGTGCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAgg > 2:976247/1‑126 (MQ=255) ccGTGCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAggg > 2:960518/1‑126 (MQ=255) ccGTGCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAggg < 2:1303687/126‑1 (MQ=255) cGTGCCGGGCACCATCCACGGCAAAATGCCAGCGCCATCCGGGAATACCACCAGTCACTCGGTGCTGTCTTCCCACAGTTGACGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGc < 1:2426997/126‑1 (MQ=255) cGTGCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGc > 2:1823924/1‑126 (MQ=255) tGCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGa < 2:2267224/126‑1 (MQ=255) tGCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGa > 1:979641/1‑126 (MQ=255) ggCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAgg < 2:818022/126‑1 (MQ=255) gCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGt < 1:2756267/126‑1 (MQ=255) cACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGtt < 1:1364200/126‑1 (MQ=255) aCCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTtg > 2:2218724/1‑126 (MQ=255) aTCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTtggtg > 2:696047/1‑126 (MQ=255) aTCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTtggtg < 2:3144503/126‑1 (MQ=255) ccACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGgtggc < 1:2656629/126‑1 (MQ=255) cACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTACTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGgtggcg < 1:2186839/126‑1 (MQ=255) cACGGCAAAATGCCAACGCCATCCGGGAATAACACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGgtggcg > 1:1173533/1‑126 (MQ=255) aCGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGgtggcgt < 1:1708058/126‑1 (MQ=255) cGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGgtggcgtg > 1:3182228/1‑126 (MQ=255) cGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGgtggcgtg < 1:2018821/126‑1 (MQ=255) ggCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGgtggcgtgg > 1:248144/1‑126 (MQ=255) aaTGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATCGGTGAGGGCGATCTGGTTGGTGGCGTGGCAGTg > 2:3095922/1‑126 (MQ=255) aTGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGc > 2:1494725/1‑126 (MQ=255) aTGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGc > 1:1523338/1‑126 (MQ=255) gCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCAt < 2:2542110/126‑1 (MQ=255) gCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCAt < 1:2115062/126‑1 (MQ=255) cAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGa < 1:2973106/126‑1 (MQ=255) cAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGa > 1:138987/1‑126 (MQ=255) cAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGa < 2:1834251/126‑1 (MQ=255) aaCGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGAt < 1:426076/126‑1 (MQ=255) cGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCa > 2:444876/1‑126 (MQ=255) cATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCAccc > 2:2566481/1‑126 (MQ=255) cATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCAccc > 2:819928/1‑126 (MQ=255) cATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCAccc < 1:234997/126‑1 (MQ=255) aTCCGGGAATACCACCAGACACTCGGTGCTGTCTTTCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGGACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCAcccc > 2:2612750/1‑125 (MQ=255) aTCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCACCCg < 2:2317170/126‑1 (MQ=255) aTCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCACCCg < 2:2833148/126‑1 (MQ=255) tCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCACCCGa < 2:560387/126‑1 (MQ=255) tgggAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCACCCGATc > 2:1725817/2‑126 (MQ=255) ggAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCACCCGATCtt > 1:1270321/1‑126 (MQ=255) aTACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCACCCGATCTTTGc > 2:1678473/1‑126 (MQ=255) accaGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCACCCGATCTTTGCCGTtg < 1:2656913/126‑1 (MQ=255) ccaGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCACCCGATCTTTGCCGTtgg > 1:1944552/1‑126 (MQ=255) ccaGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCACCCGATCTTTGCCGTtgg < 1:592164/126‑1 (MQ=255) ccaGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCACCCGATCTTTGCCGTtgg > 1:590568/1‑126 (MQ=255) caGACACTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCACCCGATCTTTGCCGTtggt > 1:277580/1‑126 (MQ=255) acacTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCACCCGATCTTTGCCGTTGGTGGc < 1:789019/126‑1 (MQ=255) acacTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCACCCGATCTTTGCCGTTGGTGGc < 2:248144/126‑1 (MQ=255) cacTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCACCCGATCTTTGCCGTTGGTGGCt > 1:722770/1‑126 (MQ=255) cacTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGCTGGTGGCGTGGCAGTGCATGAACACCCGATCTTTGCCGTTGGTGGCt > 2:2872377/1‑126 (MQ=255) acTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCACCCGATCTTTGCCGTTGGTGGCtt > 2:2298256/1‑126 (MQ=255) acTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCACCCGATCTTTGCCGTTGGTGGCtt < 1:1388982/126‑1 (MQ=255) cTCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCACCCGATCTTTGCCGTTGGTGGCttt < 1:992360/126‑1 (MQ=255) tCGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCACCCGATCTTTGCGGTTGGTGGCTTTa > 1:3324003/1‑126 (MQ=255) cGGTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCACCCGATCTTTGCCGTTGGTGGCTTTaa < 1:872410/126‑1 (MQ=255) ggTGCTGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCACCCGATCTTTGCCGTTGGTGGCTTTAAt < 1:2477343/126‑1 (MQ=255) tGTCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCACCCGATCTTTGCCGTTGGTGGCTTTAATGCGCt < 1:2950951/126‑1 (MQ=255) tCTTCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCACCCGATCTTTGCCGTTGGTGGCTTTAATGCGCTCg < 2:704525/126‑1 (MQ=255) ttCCCACAGTTGGCGAATGAAGACCGCGGTGTCGATTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCACCCGATCTTTGCCGTTGGTGGCTTTAATGCGCTCGCa < 1:950530/126‑1 (MQ=255) tCCCACAGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCACCCGATCTTTGCCGTTGGTGGCTTTAATGCGCTCGCAg < 2:921643/126‑1 (MQ=255) cacaGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCACCCGATCTTTGCCGTTGGTGGCTTTAATGCGCt > 2:1679513/1‑118 (MQ=255) acaGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCACCCGATCTTTGCCGTTGGTGGCTTTAATGCGCTCGCAGTggg > 2:2959370/1‑126 (MQ=255) aGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCACCCGATCTTTGCCGTTGGTGGCTTTAATGCGCTCGCAGTGGGaa < 2:395850/126‑1 (MQ=255) aGTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCACCCGATCTTTGCCGTTGGTGGCTTTAATGCGCTCGCAGTGGGaa > 2:9094/1‑126 (MQ=255) gTTGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCACCCGATCTTTGCCGTTGGTGGCTTTAATGCGCTCGCAGTGGGaaa > 2:1038001/1‑126 (MQ=255) ttGGCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCACCCGATCTTTGCCGTTGGTGGCTTTAATGCGCTCGCAGTGGGAAAg < 1:1370497/126‑1 (MQ=255) ggCGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCACCCGATCTTTGCCGTTGGTGGCTTTAATGCGCTCGCAGTGGGAAAGGa > 1:1714130/1‑126 (MQ=255) cGAATGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCACCCGATCTTTGCCGTTGGTGGCTTTAATGCGCTCGCAGTGGGAAAGGAAg > 1:3332299/1‑126 (MQ=255) | TTTTGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCCGGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCACCCGATCTTTGCCGTTGGTGGCTTTAATGCGCTCGCAGTGGGAAAGGAAG > CP009273/4087025‑4087270 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |