BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP009273	3,464,372	+A	coding (317/1185 nt)	tufA ←	translation elongation factor EF‑Tu 1

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP009273	3,464,370	1	.	A	100.0%	207.7 / NA	105	A107S (GCT→TCT)	tufA	translation elongation factor EF‑Tu 1
Reads supporting (aligned to +/- strand): ref base . (0/0); new base A (46/59); total (46/59)

Only 100 of 106 total aligned reads displayed.

TACGGAACGCCTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGC‑AACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGA  >  CP009273/3464300‑3464464

tACGGAACGCCTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGag                                                                   <  1:2061785/101‑1 (MQ=9)

tACGGAACGCCTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGag                                                                   >  2:527993/1‑101 (MQ=9)

 aCGGAACGCCTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGagc                                                                  <  1:3893984/101‑1 (MQ=12)

 aCGGAACGCCTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGagc                                                                  <  2:1029690/101‑1 (MQ=12)

 aCGGAACGCCTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGagc                                                                  <  2:721689/101‑1 (MQ=12)

    gAACGCCTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGagcagc                                                               <  2:1285987/101‑1 (MQ=12)

    gAACGCCTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGagcagc                                                               <  2:1245735/101‑1 (MQ=12)

     aaCGCCTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAgcagca                                                              >  2:314130/1‑101 (MQ=12)

      aCGCCTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCAc                                                             >  2:2723622/1‑101 (MQ=12)

      aCGCCTACCTGACGACCCAGCAGGATGCGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCAc                                                             >  1:1592705/1‑101 (MQ=255)

       cGCCTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCAcc                                                            >  2:1957919/1‑101 (MQ=12)

       cGCCTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCAcc                                                            <  2:416273/101‑1 (MQ=12)

       cGCCTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCAcc                                                            <  2:3833320/101‑1 (MQ=12)

       cGCCTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCAcc                                                            >  1:429780/1‑101 (MQ=12)

        gCCTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCg                                                           >  1:1424067/1‑101 (MQ=12)

        gCCTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCg                                                           <  1:1386941/101‑1 (MQ=12)

         ccTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCgg                                                          >  2:2897983/1‑101 (MQ=12)

          cTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGt                                                         >  2:2894954/1‑101 (MQ=12)

          cTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGt                                                         <  1:1236489/101‑1 (MQ=12)

            gccTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGa                                                       <  2:3241716/100‑1 (MQ=12)

            aCCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGa                                                       >  1:3146897/1‑101 (MQ=12)

            aCCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGa                                                       <  2:275046/101‑1 (MQ=16)

             ccTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGAt                                                      <  1:1053413/101‑1 (MQ=16)

             ccTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGAt                                                      >  2:3236266/1‑101 (MQ=12)

             ccTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGAt                                                      <  1:1593416/101‑1 (MQ=16)

             ccTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGAt                                                      <  2:3816142/101‑1 (MQ=12)

               tGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCa                                                    <  1:3440336/101‑1 (MQ=16)

               tGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCa                                                    <  1:2228839/101‑1 (MQ=12)

                gacgacCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCAt                                                   <  2:1517380/101‑1 (MQ=16)

                   gacCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGtt                                                >  2:1934820/1‑101 (MQ=12)

                   gacCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGtt                                                >  2:2420468/1‑101 (MQ=12)

                   gacCCAGCAGGATGTGCTCACGAGTCCGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGtt                                                >  2:1096331/1‑101 (MQ=255)

                    acCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGttt                                               >  2:3469726/1‑101 (MQ=12)

                       cagcagGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTa                                            >  2:3401311/1‑101 (MQ=12)

                        agcagGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCTCCGGTGATCATGTTTTTaa                                           <  2:3644442/101‑1 (MQ=255)

                         gcagGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAAc                                          <  1:3288767/101‑1 (MQ=16)

                         gcagGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGCCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAAc                                          >  2:2094056/1‑101 (MQ=255)

                          cagGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAACa                                         <  2:3817037/101‑1 (MQ=12)

                          cagGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAACa                                         <  1:1396988/101‑1 (MQ=16)

                          cagGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAACa                                         <  2:134847/101‑1 (MQ=12)

                           agGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAACAt                                        >  2:2813741/1‑101 (MQ=12)

                           agGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAACAt                                        <  1:3797286/101‑1 (MQ=16)

                           agGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAACAt                                        >  1:1678729/1‑101 (MQ=12)

                            ggATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAACATa                                       <  2:360297/101‑1 (MQ=16)

                             gATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAACATAg                                      <  2:1374577/101‑1 (MQ=12)

                             gATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAACATAg                                      <  1:2504858/101‑1 (MQ=16)

                              aTGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAACATAGt                                     <  2:2576436/101‑1 (MQ=12)

                              aTGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAACATAGt                                     <  2:3878582/101‑1 (MQ=12)

                               tgtgCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAACATAGTc                                    <  1:3729421/101‑1 (MQ=16)

                                gtgCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAACATAGTCg                                   <  2:790119/101‑1 (MQ=16)

                                gtgCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAACATAGTCg                                   <  1:1662035/101‑1 (MQ=16)

                                gtgCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAACATAGTCg                                   <  2:1206487/101‑1 (MQ=16)

                                 tgCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAACATAGTCgg                                  <  2:2492641/101‑1 (MQ=12)

                                 tgCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAACATAGTCgg                                  <  1:829723/101‑1 (MQ=16)

                                  gCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAACATAGTCGGc                                 >  2:3445268/1‑101 (MQ=12)

                                  gCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAACATAGTCGGc                                 <  1:3497249/101‑1 (MQ=16)

                                   cTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCg                                >  2:3524412/1‑101 (MQ=12)

                                   cTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCg                                <  1:718320/101‑1 (MQ=16)

                                    tCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGt                               <  1:2025216/101‑1 (MQ=16)

                                     cACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTg                              <  1:2316627/101‑1 (MQ=16)

                                      aCGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGc                             <  1:1899442/101‑1 (MQ=16)

                                      aCGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGc                             <  2:2873827/101‑1 (MQ=16)

                                        gAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGccc                           <  2:3458932/101‑1 (MQ=12)

                                        gAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGccc                           >  1:3297005/1‑101 (MQ=12)

                                          gTCTGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCg                         <  2:1497904/101‑1 (MQ=16)

                                           tCTGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCgg                        <  2:1897021/101‑1 (MQ=12)

                                            cTGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCggg                       <  2:3031511/101‑1 (MQ=12)

                                             tGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGGCCCGGGc                      >  2:3674551/1‑101 (MQ=255)

                                             tGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGc                      >  2:2856966/1‑101 (MQ=12)

                                             tGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGc                      <  2:3608405/101‑1 (MQ=12)

                                             tGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGc                      <  2:2273305/101‑1 (MQ=12)

                                             tGCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGc                      >  2:411991/1‑101 (MQ=12)

                                              gCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCa                     >  1:2702358/1‑101 (MQ=12)

                                              gCGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCa                     <  1:3072246/101‑1 (MQ=12)

                                               cGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAg                    >  2:2668451/1‑101 (MQ=12)

                                               cGGCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAg                    <  1:3350660/101‑1 (MQ=12)

                                                ggCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGt                   >  1:3894338/1‑101 (MQ=12)

                                                ggCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGt                   <  1:919750/101‑1 (MQ=12)

                                                 gCATCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTc                  >  2:2685840/1‑101 (MQ=12)

                                                   aTCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTa                >  1:1595003/1‑101 (MQ=12)

                                                    tCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTAc               <  2:474942/101‑1 (MQ=12)

                                                    tCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTAc               <  2:399604/101‑1 (MQ=12)

                                                    tCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTAc               >  2:2051447/1‑101 (MQ=12)

                                                    tCGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTAc               <  1:156821/101‑1 (MQ=12)

                                                     cGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACg              >  2:2749301/1‑101 (MQ=12)

                                                     cGGGCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACg              >  2:2276263/1‑101 (MQ=12)

                                                      gggCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACgt             >  1:837609/1‑101 (MQ=12)

                                                       ggCCGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACgtg            <  1:2795283/101‑1 (MQ=12)

                                                          cGTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGc         >  2:1323563/1‑101 (MQ=16)

                                                           gTCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCg        >  2:3624781/1‑101 (MQ=12)

                                                            tCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGt       >  1:2362219/1‑101 (MQ=12)

                                                            tCAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGt       >  2:479571/1‑101 (MQ=12)

                                                             cAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTa      >  2:3848296/1‑101 (MQ=16)

                                                             cAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTa      >  1:2943454/1‑101 (MQ=12)

                                                             cAGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTa      >  2:409772/1‑101 (MQ=16)

                                                              aGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAg     <  2:1528794/101‑1 (MQ=12)

                                                              aGTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAg     <  2:2724964/101‑1 (MQ=12)

                                                               gTCGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGt    <  2:1448557/101‑1 (MQ=12)

                                                                 cGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGa  >  1:2553456/1‑101 (MQ=16)

                                                                 cGCAGCAAACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGa  <  2:1724117/101‑1 (MQ=12)

TACGGAACGCCTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGC‑AACTACCAGGATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGA  >  CP009273/3464300‑3464464

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`