BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP009273	1,543	G→A	G403S (GGT→AGT)	thrA →	Bifunctional aspartokinase/homoserine dehydrogenase 1

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP009273	1,543	0	G	A	100.0%	648.3 / NA	159	G403S (GGT→AGT)	thrA	Bifunctional aspartokinase/homoserine dehydrogenase 1
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (78/81); total (78/81)

Only 100 of 165 total aligned reads displayed.

CTGAACGGGCAATGCAGGAAGAGTTCTACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAGGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCACTGGCCCGCGCCAATATCAACATTGTCGCCATTGCTCAGGGATCTTC  >  CP009273/1445‑1640

cTGAACGGGCAATGCAGGAAGAGTTCTACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGt                                                                                                 <  1:1672748/101‑1 (MQ=255)

cTGAACGGGCAATGCAGGAAGAGTTCTACCTGGAACTGAAAGAAGGCTTACGGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGt                                                                                                 <  2:335991/101‑1 (MQ=255)

 tGAACGGGCAATGCAGGAAGAGTTCTACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTg                                                                                                >  1:561761/1‑101 (MQ=255)

  gAACGGGCAATGCAGGAAGAGTTCTACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGa                                                                                               >  2:627468/1‑101 (MQ=255)

  gAACGGGCAATGCAGGAAGAGTTCTACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGa                                                                                               <  1:2401516/101‑1 (MQ=255)

   aaCGGGCAATGCAGGAAGAGTTCTACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGAt                                                                                              <  2:1017975/101‑1 (MQ=255)

    atgggCAATGCAGGAAGAGTTCTACCTGGAACTGAAAGAAGGCTTTCTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGATg                                                                                             <  2:391651/99‑1 (MQ=255)

    aCGGGCAATGCAGGAAGAGTTCTACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGATg                                                                                             <  2:427532/101‑1 (MQ=255)

    aCGGGCAATGCAGGAAGAGTTCTACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGATg                                                                                             >  2:2064814/1‑101 (MQ=255)

     cGGGCAATGCAGGAAGAGTTCTACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGATgg                                                                                            >  1:2718758/1‑101 (MQ=255)

     cGGGCAATGCAGGAAGAGTTCTACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGATgg                                                                                            <  2:1878820/101‑1 (MQ=255)

     cGGGCAATGCAGGAAGAGTTCTACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGATgg                                                                                            <  2:2526311/101‑1 (MQ=255)

     cGGGCAATGCAGGAAGAGTTCTACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGATgg                                                                                            <  2:2897272/101‑1 (MQ=255)

      gggCAATGCAGGAAGAGTTCTACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGATGGt                                                                                           <  2:1989749/101‑1 (MQ=255)

      gggCAATGCAGGAAGAGTTCTACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGATGGt                                                                                           >  2:3338966/1‑101 (MQ=255)

        gCAATGCAGGAAGAGTTCTACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGATGGTAt                                                                                         <  2:2491145/101‑1 (MQ=255)

        gCAATGCAGGAAGAGTTCTACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGATGGTAt                                                                                         <  2:2589396/101‑1 (MQ=255)

        gCAATGCAGGAAGAGTTCTACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGATGGTAt                                                                                         <  2:3665675/101‑1 (MQ=255)

         cAATGCAGGAAGAGTTCTACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGATGGTATg                                                                                        <  1:2020826/101‑1 (MQ=255)

          aaTGCAGGAAGAGTTCTACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGATGGTATgc                                                                                       <  2:1800598/101‑1 (MQ=255)

          aaTGCAGGAAGAGTTCTACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGATGGTATgc                                                                                       >  1:2875694/1‑101 (MQ=255)

           aTGCAGGAAGAGTTCTACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGATGGTATgcg                                                                                      >  2:2966370/1‑101 (MQ=255)

             gCAGGAAGAGTTCTACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGATGGTATGCGCa                                                                                    <  2:1761255/101‑1 (MQ=255)

              cAGGAAGAGTTCTACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGATGGTATGCGCAc                                                                                   >  2:835129/1‑101 (MQ=255)

               tggAAGAGTTCTACCTGGAACTCAAAGAAGGCTTACTGGAACCGCTGGCAGGGAGGGAACGGCTGGCCCTTATCTCGGAGGTTCGGGAGGGTAGGCGCAcc                                                                                  >  2:3824342/2‑101 (MQ=255)

               aGGAAGAGTTCTACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGATGGTATGCGCAcc                                                                                  >  1:273386/1‑101 (MQ=255)

               aGGAAGAGTTCTACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGATGGTATGCGCAcc                                                                                  >  1:1914387/1‑101 (MQ=255)

                ggAAGAGTTCTACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGATGGTATGCGCACCt                                                                                 <  2:1599067/101‑1 (MQ=255)

                 gAAGAGTTCTACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGATGGTATGCGCACCtt                                                                                <  1:665440/101‑1 (MQ=255)

                     agTTCTACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGATGGTATGCGCACCTTGCGt                                                                            <  2:3673089/101‑1 (MQ=255)

                      gTTCTACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGATGGTATGCGCACCTTGCGTg                                                                           <  2:2620368/101‑1 (MQ=255)

                      gTTCTACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGATGGTATGCGCACCTTGCGTg                                                                           >  1:1392317/1‑101 (MQ=255)

                       ttCTACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGATGGTATGCGCACCTTGCGTgg                                                                          <  1:2753821/101‑1 (MQ=255)

                       ttCTACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGATGGTATGCGCACCTTGCGTgg                                                                          >  1:2696445/1‑101 (MQ=255)

                       ttCTACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGATGGTATGCGCACCTTGCGTgg                                                                          <  2:3895110/101‑1 (MQ=255)

                         cTACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGATGGTATGCGCACCTTGCGTGGGa                                                                        >  2:3858404/1‑101 (MQ=255)

                         cTACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGATGGTATGCGCACCTTGCGTGGGa                                                                        >  2:479976/1‑101 (MQ=255)

                          tACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGATGGTATGCGCACCTTGCGTGGGAt                                                                       >  1:1601292/1‑101 (MQ=255)

                          tACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGATGGTATGCGCACCTTGCGTGGGAt                                                                       >  2:1263289/1‑101 (MQ=255)

                          tACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGATGGTATGCGCACCTTGCGTGGGAt                                                                       <  2:727308/101‑1 (MQ=255)

                           aCCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGATGGTATGCGCACCTTGCGTGGGAtc                                                                      <  2:1832616/101‑1 (MQ=255)

                            ccTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGATGGTATGCGCACCTTGCGTGGGAtct                                                                     <  2:316834/101‑1 (MQ=255)

                             cTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGATGGTATGCGCACCTTGCGTGGGAtctc                                                                    <  2:1894732/101‑1 (MQ=255)

                              tGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGATGGTATGCGCACCTTGCGTGGGATCTCg                                                                   <  1:3398822/101‑1 (MQ=255)

                               ggAACTGAAAGAAGGCTTACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGATGGTATGCGCACCTTGCGTGGGATCTCgg                                                                  <  1:1426522/101‑1 (MQ=255)

                                gAACTGAAAGAAGGCTTACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGATGGTATGCGCCCCTTGCGTGGGATCTCGGc                                                                 <  1:86567/101‑1 (MQ=255)

                                gAACTGAAAGAAGGCTTACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGATGGTATGCGCACCTTGCGTGGGATCTCGGc                                                                 >  1:2313599/1‑101 (MQ=255)

                                gAACTGAAAGAAGGCTTACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGATGGTATGCGCACCTTGCGTGGGATCTCGGc                                                                 <  2:348305/101‑1 (MQ=255)

                                 aaCTGAAAGAAGGCTTACTGTAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCg                                                                <  2:590359/101‑1 (MQ=255)

                                 aaCTGAAAGAAGGCTTACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCg                                                                >  2:1767876/1‑101 (MQ=255)

                                    tGAAAGAAGGCTTACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGaaa                                                             >  1:3126079/1‑101 (MQ=255)

                                      aaaGAAGGCTTACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAAtt                                                           <  2:149641/101‑1 (MQ=255)

                                        agaagGCTTACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCt                                                         <  2:142212/101‑1 (MQ=255)

                                        agaagGCTTACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCt                                                         >  1:1995727/1‑101 (MQ=255)

                                         gaagGCTTACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCtt                                                        >  1:2749250/1‑101 (MQ=255)

                                         gaagGCTTACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCtt                                                        >  1:1085522/1‑101 (MQ=255)

                                          aagGCTTACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGATGGAATGGGCACCTTGGGTGGGATCTCGGCGAAATTCttt                                                       >  2:375726/1‑101 (MQ=255)

                                            ggCTTACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGc                                                     <  2:1198005/101‑1 (MQ=255)

                                             gCTTACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGCAAGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGcc                                                    >  2:557995/1‑101 (MQ=255)

                                              cTTACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCg                                                   >  1:2396675/1‑101 (MQ=255)

                                               ttACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGc                                                  >  2:820934/1‑101 (MQ=255)

                                                 aCTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCAc                                                >  1:2826781/1‑101 (MQ=255)

                                                 aCTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCAc                                                <  2:2845073/101‑1 (MQ=255)

                                                      aGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCACTGGcc                                           >  2:3206233/1‑101 (MQ=255)

                                                      aGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGGGGCAAGAGTTGGTATGCGCACCTTTCGTGGGATCTCGGCGAAATTCTTTGCCGCACTGGcc                                           >  2:1131066/1‑101 (MQ=255)

                                                       gCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCACTGGccc                                          <  2:1042274/101‑1 (MQ=255)

                                                       gCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCACTGGccc                                          <  1:451267/101‑1 (MQ=255)

                                                        ccGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCACTGGCCcg                                         <  2:2412577/101‑1 (MQ=255)

                                                        ccGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCACTGGCCcg                                         >  1:2307366/1‑101 (MQ=255)

                                                          gCTGGCAGTGACGGATTGGCTGGACATTATCTCGGTGGTAAGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCACTGGCCcgcg                                       <  2:3230691/101‑1 (MQ=255)

                                                               cAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCACTGGCCCGCGCCAat                                  <  1:3278641/101‑1 (MQ=255)

                                                                aGTGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCACTGGCCCGCGCCAata                                 >  1:2530253/1‑101 (MQ=255)

                                                                  tGACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCACTGGCCCGCGCCAATATc                               <  2:1646209/101‑1 (MQ=255)

                                                                   gACGGAACGGCTGGCCATTATCTCGGTGGTAAGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCACTGGCCCGCGCCAATATCa                              <  2:3111682/101‑1 (MQ=255)

                                                                     cGGAACGGCTGGCCATTATCTCGGTGGTAAGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCACTGGCCCGCGCCAATATCAAc                            <  2:1891560/101‑1 (MQ=255)

                                                                      ggAACGGCTGGCCATTATCTCGGTGGTAAGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCACTGGCCCGCGCCAATATCAACa                           >  1:3541200/1‑101 (MQ=255)

                                                                          cGGCTGGCCATTATCTCGGTGGTAAGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCACTGGCCCGCGCCAATATCAACATTGt                       >  2:3502384/1‑101 (MQ=255)

                                                                           ggCTGGCCATTATCTCGGTGGTAAGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTGTTTGCCGCACTGGCCCGCGCCAATATCAACATTGTc                      >  1:2934032/1‑101 (MQ=255)

                                                                           ggCTGGCCATTATCTCGGTGGTAAGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCACTGGCCCGCGCCAATATCAACATTGTc                      >  2:2263022/1‑101 (MQ=255)

                                                                            gCTGGCCATTATCTCGGTGGTAAGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCACTGGCCCGCGCCAATATCAACATTGTCg                     <  2:2351431/101‑1 (MQ=255)

                                                                              tGGCCATTATCTCGGTGGTAAGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCACTGGCCCGCGCCAATATCAACATTGTCGcc                   >  2:3927998/1‑101 (MQ=255)

                                                                              tGGCCATTATCTCGGTGGTAAGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCACTGGCCCGCGCCAATATCAACATTGTCGcc                   >  1:2848273/1‑101 (MQ=255)

                                                                               ggCCATTATCTCGGTGGTAAGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCACTGGCCCGCGCCAATATCAACATTGTCGCCa                  >  2:892852/1‑101 (MQ=255)

                                                                                gCCATTATCTCGGTGGTAAGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCACTGGCCCGCGCCAATATCAACATTGTCGCCAt                 >  2:494243/1‑101 (MQ=255)

                                                                                 ccATTATCTCGGTGGTAAGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCACTGGCCCGCGCCAATATCAACATTGTCGCCAtt                <  2:1827329/101‑1 (MQ=255)

                                                                                  cATTATCTCGGTGGTAAGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCACTGGCCCGCGCCAATATCAACATTGTCGCCATTg               <  2:3382584/101‑1 (MQ=255)

                                                                                  cATTATCTCGGTGGTAAGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCACTGGCCCGCGCCAATATCAACATTGTCGCCATTg               <  1:1546114/101‑1 (MQ=255)

                                                                                   aTTATCTCGGTGGTAAGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCACTGGCCCGCGCCAATATCAACATTGTCGCCATTGc              >  1:3488192/1‑101 (MQ=255)

                                                                                     tATCTCGGTGGTAAGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCACTGGCCCGCGCCAATATCAACATTGTCGCCATTGCTc            >  1:613254/1‑101 (MQ=255)

                                                                                     tATCTCGGTGGTAAGCGATGGTATGCGCACCTTGCGAGGGATCTCGGCGAAATTCTTTGCCGCACTGGCCCGCGCCAATATCAACATTGTCGCCATTGCTc            >  2:3058976/1‑101 (MQ=255)

                                                                                      aTCTCGGTGGTAAGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCACTGGCCCGCGCCAATATCAACATTGTCGCCATTGCTCa           >  1:2387744/1‑101 (MQ=255)

                                                                                        ctcGGTGGTAAGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCACTGGCCCGCGCCAATATCAACATTGTCGCCATTGCTCAgg         >  1:1303010/1‑101 (MQ=255)

                                                                                        ctcGGTGGTAAGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCACTGGCCCGCGCCAATATCAACATTGTCGCCATTGCTCAgg         <  1:327618/101‑1 (MQ=255)

                                                                                          cGGTGGTAAGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCACTGGCCCGCGCCAATATCAACATTGTCGCCATTGCTCAGGGa       <  2:3335008/101‑1 (MQ=255)

                                                                                          cGGTGGTAAGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCACTGGCCCGCGCCAATATCAACATTGTCGCCATTGCTCAGGGa       <  1:2275283/101‑1 (MQ=255)

                                                                                           ggtggtAAGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCACTGGCCCGCGCCAATATCAACATTGTCGCCATTGCTCAGGGAt      >  1:3879250/1‑101 (MQ=255)

                                                                                            gtggtAAGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCACTGGCCCGCGCCAATATCAACATTGTCGCCATTGCTCAGGGAtc     >  1:2825528/1‑101 (MQ=255)

                                                                                             tggtAAGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCACTGGCCCGCGCCAATATCAACATTGTCGCCATTGCTCAGGGAtct    >  2:1329303/1‑101 (MQ=255)

                                                                                              ggtAAGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCACTGGCCCGCGCCAATATCAACATTGTCGCCATTGCTCAGGGAtctt   <  1:3858404/101‑1 (MQ=255)

                                                                                               gtAAGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCACTGGCCCGCGCCAATATCAACATTGTCGCCATTGCTCAGGGAtcttc  >  1:3636468/1‑101 (MQ=255)

CTGAACGGGCAATGCAGGAAGAGTTCTACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAGGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCACTGGCCCGCGCCAATATCAACATTGTCGCCATTGCTCAGGGATCTTC  >  CP009273/1445‑1640

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`