| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009273 | 3,907,225 | +A | coding (1336/1371 nt) | glmU ← | fused N‑acetyl glucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyl transferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,907,225 | 1 | . | A | 98.7% | 597.3 / ‑0.6 | 159 | coding (1336/1371 nt) | glmU | fused N‑acetyl glucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyl transferase |
| Reads supporting (aligned to +/- strand): ref base . (2/0); new base A (72/85); total (74/85) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.15e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.12e-01 | |||||||||||
Only 100 of 174 total aligned reads displayed.
TAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTT‑CTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGACATTACGCGTCACAGTTGTACCCGCAGCAATGGTCGCGCCTTTGCCTACTGTTACCGGGGCCACCAGCTGAGTGT > CP009273/3907100‑3907344 | tAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCttcttt < 1:1465643/126‑1 (MQ=255) agagagTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCttcttta < 2:1635580/126‑2 (MQ=255) agagagTGGGGTTATTTTTATAGTTACTGCTTGAGGGAGGGAGATTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCttcttta > 2:2244121/1‑125 (MQ=255) agTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCttctttactga < 2:1303752/126‑6 (MQ=255) agTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCttctttactga > 2:2813679/1‑121 (MQ=255) ggggTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTc < 2:714127/126‑1 (MQ=255) gggTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCt < 1:1051078/126‑1 (MQ=255) ggTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTg > 1:1831080/1‑126 (MQ=255) aTTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGc < 1:2521518/126‑1 (MQ=255) tttttATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGca < 2:545495/126‑1 (MQ=255) ttttATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGcac < 1:70919/126‑1 (MQ=255) ttttATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGcac < 1:2228279/126‑1 (MQ=255) tttATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGcaca < 2:461853/126‑1 (MQ=255) tataGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACg > 1:1157453/1‑126 (MQ=255) gTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTg > 2:1478692/1‑126 (MQ=255) tACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGAt < 2:600293/126‑1 (MQ=255) tACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGAt < 1:2969336/126‑1 (MQ=255) cTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAg > 2:474437/1‑126 (MQ=255) tGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGc < 1:1948649/126‑1 (MQ=255) cTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTa < 2:2925543/126‑1 (MQ=255) ttGTGGGAGGGAGATTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTaa < 2:868307/126‑1 (MQ=255) ttGTGGGAGGGAGATTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTaa > 1:1917057/1‑126 (MQ=255) tgtgGGAGGGAGATTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAAt > 1:84245/1‑126 (MQ=255) gtgGGAGGGAGATTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATg < 2:214143/126‑1 (MQ=255) tgGGAGGGAGATTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGc > 1:814396/1‑126 (MQ=255) ggagggagATTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCAt < 2:3338276/126‑1 (MQ=255) ggagggagATTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCAt < 2:2009267/126‑1 (MQ=255) gagaTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCg < 1:2526983/126‑1 (MQ=255) gaTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGcc < 1:1000935/126‑1 (MQ=255) gaTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGcc > 2:2521694/1‑126 (MQ=255) gaTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGcc > 1:2085054/1‑126 (MQ=255) tATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGAc < 2:2913524/126‑1 (MQ=255) tGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGACAt < 2:1049963/126‑1 (MQ=255) tATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGACATTAc < 1:2151715/126‑1 (MQ=255) tctcCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGACATTAcgc > 1:903811/1‑126 (MQ=255) ctcctcATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGACATTAcgcg > 2:2990872/1‑126 (MQ=255) tcctcATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGACATTACGCGt > 1:15604/1‑126 (MQ=255) cctcATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGACATTACGCGTc < 1:256128/126‑1 (MQ=255) cctcATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGACATTACGCGTc < 1:2837171/126‑1 (MQ=255) tcATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGACATTACGCGTcac < 2:774341/126‑1 (MQ=255) cATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCTAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGACATTACGCGTcaca > 2:1700047/1‑126 (MQ=255) cATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGACATTACGCGTcaca < 1:219037/126‑1 (MQ=255) cATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGACATTACGCGTcaca > 1:2484677/1‑126 (MQ=255) cATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGACATTACGCGTcaca > 1:2315769/1‑126 (MQ=255) cATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGACATTACGCGTcaca < 1:2455541/126‑1 (MQ=255) aTCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGACATTACGCGTCACAg < 2:582696/126‑1 (MQ=255) ccATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGACATTACGCGTCACAGTTg < 2:1615534/126‑1 (MQ=255) ccATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGACATTACGCGTCACAGTTg > 1:1398255/1‑126 (MQ=255) ccATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGACATTACGCGTCACAGTTg < 2:2724810/126‑1 (MQ=255) aTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGACATTACGCGTCACAGTTGTa > 1:2469446/1‑126 (MQ=255) tgACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTAGTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGACATTACGCGTCACAGTTGTAccc > 1:2454308/1‑126 (MQ=255) tgACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGACATTACGCGTCACAGTTGTAccc < 2:1832197/126‑1 (MQ=255) tgACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGACATTACGCGTCACAGTTGTAccc > 2:51122/1‑126 (MQ=255) gACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGACATTACGCGTCACAGTTGTACCCg < 2:3121779/126‑1 (MQ=255) aCCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGACATTACGCGTCACAGTTGTACCCgc > 2:3157237/1‑126 (MQ=255) ccGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGACATTACGCGTCACAGTTGTACCCgca > 1:979060/1‑126 (MQ=255) gggTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGACATTACGCGTCACAGTTGTACCCgcagc > 2:3259619/1‑126 (MQ=255) gggTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGACATTACGCGTCACAGTTGTACCCgcagc < 2:1910139/126‑1 (MQ=255) gTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGCCATTACGCGTCACAGTTGTACCCGCAGCaa > 2:2709418/1‑126 (MQ=255) gTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGACATTACGCGTCACAGTTGTACCCGCAGCaa < 1:2748148/126‑1 (MQ=255) tAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGACATTACGCGTCACAGTTGTACCCGCATCAATg > 1:2574274/1‑126 (MQ=255) tAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGACATTACGCGTCACAGTTGTACCCGCAGCAATg < 1:441035/126‑1 (MQ=255) ccGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGACATTACGCGTCACAGTTGTACCCGCAGCAATGGTc < 1:2817904/126‑1 (MQ=255) cGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTNATGCATTTTCGCCGACATTACGCGTCACAGTTGTATCCGCAGCAATGGTcg < 1:2783642/126‑1 (MQ=255) cGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGACATTACGCGTCACAGTTGTACCCGCAGCAATGGTcg > 1:562489/1‑126 (MQ=255) cGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGACATTACGCGTCACAGTTGTACCCGCAGCAATGGTcg < 2:2281272/126‑1 (MQ=255) gCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGACATTACGCGTCACAGTTGTACCCGCAGCAATGGTcgcg < 2:2474205/126‑1 (MQ=255) ccAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGACATTACGCGTCACAGTTGTACCCGCAGCAATGGTCgcgc > 1:188635/1‑126 (MQ=255) ccAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGACATTACGCGTCACAGTTGTACCCGCAGCAATGGTCgcgc > 1:2501668/1‑126 (MQ=255) ccAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGACATTACGCGTCACAGTTGTACCCGCAGCAATGGTCgcgc > 1:2892816/1‑126 (MQ=255) aGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGACATTACGCGTCACAGTTGTACCCGCAGCAATGGTCGCGCCt > 1:2729102/1‑126 (MQ=255) aGAATCACTTTTTCTCTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGACATTACGCGTCACAGTTGTACCCGCAGCAATGGTCGCGCCt > 2:2351910/1‑126 (MQ=255) gAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAAGGCATTCTCGCCGACATTACGCGTCACAGTTGTACCCACAGCAATGGTCGCTCCtt > 1:2210864/1‑126 (MQ=255) aaTCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCAGCTCGCTAATGAATTTTCGCCGACATTACGCGTCACAGTTGTACCCGCAGCAATGGTAGCACCttt > 2:915332/1‑126 (MQ=255) cTTTTTCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGACATTACGCGTCACAGTTGTACCCGCAGCAATGGTCGCGCCTTTGCCTa > 1:1254718/1‑126 (MQ=255) tttttCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGACATTACGCGTCACAGTTGTACCCGCAGCAATGGTCGCGCCTTTGCCTAc > 2:2970884/1‑126 (MQ=255) ttCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGACATTACGCGTCACAGTTGTACCCGCAGCAATGGTCGCGCCTTTGCCTACTGt > 2:276528/1‑126 (MQ=255) tCTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGACATTACGCGTCACAGTTGTACCCGCAGCAATGGTCGCGCCTTTGCCTACTGtt < 1:3136341/126‑1 (MQ=255) cTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGACATTACGCGTCACAGTTGTACCCGCAGCAATGGTCGCGCCTTTGCCTACTGTTa < 1:1697864/126‑1 (MQ=255) cTTTACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGACATTACGCGTCACAGTTGTACCCGCAGCAATGGTCGCGCCTTTGCCTACTGTTa < 2:1368166/126‑1 (MQ=255) tttACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGACATTACGCGTCACAGTTGTACCCGCAGCAATGGTCGCGCCTTTGCCTACTGTTAc < 2:1181725/126‑1 (MQ=255) ttACCGGACGAGGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGACATTACGCGTCACAGTTGTACCCGCAGCAATGGTCGCGCCTTTGCCTACTGTTAcc < 1:2614988/126‑1 (MQ=255) ttACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGACATTACGCGTCACAGTTGTACCCGCAGCAATGGTCGCGCCTTTGCCTACTGTTAcc > 2:1352726/1‑126 (MQ=255) ttACCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGACATTACGCGTCACAGTTGTACCCGCAGCAATGGTCGCGCCTTTGCCTACTGTTAcc > 1:1196223/1‑126 (MQ=255) aCCGGACGACGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGACATTACGCGTCACAGTTGTACCCGCAGCAATGGTCGCGCCTTTGCCTACTGTTACCgg > 1:2522643/1‑126 (MQ=255) gacgacGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGACATTACGCGTCACAGTTGTACCCGCAGCAATGGTCGCGCCTTTGCCTACTGTTACCGGGGcc > 2:2935185/1‑126 (MQ=255) gacgacGCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGACATTACGCGTCACAGTTGTACCCGCAGCAATGGTCGCGCCTTTGCCTACTGTTACCGGGGcc > 1:498032/1‑126 (MQ=255) acgacgCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGACATTACGCGTCACAGTTGTACCCGCAGCAATGGTCGCGCCTTTGCCTACTGTTACCGGGGcca < 2:954807/126‑1 (MQ=255) acgacgCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGACATTACGCGTCACAGTTGTACCCGCAGCAATGGTCGCGCCTTTGCCTACTGTTACCGGGGcca > 1:512250/1‑126 (MQ=255) gacgCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGACATTACGCGTCACAGTTGTACCCGCAGCAATGGTCGCGCCTTTGCCTACTGTTACCGGGGccacc > 1:3334734/1‑126 (MQ=255) acgCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGACATTACGCGTCACAGTTGTACCCGCAGCAATGGTCGCGCCTTTGCCTACTGTTACCGGGGccacca < 1:114687/126‑1 (MQ=255) cgCCAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGACATTACGCGTCACAGTTGTACCCGCAGCAATGGTCGCGCCTTTGCCTACTGTTACCGGGGCCACCAg > 1:3185479/1‑126 (MQ=255) cgCCAGCCTTCTTTACTGAGTCTGCGGCACACGACTGATAGCTAATGCATTTTCGCCGACATTACGCGTCACAGTTGTACCCGCAGCAATGGTCGCGCCTTTGCCTACTGTTACCGGGGCCACCAg > 2:2501893/1‑126 (MQ=255) gCCAGCCTTGTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGACATTACGCGTCACAGTTGTACCCGCAGCAATGGTCGCGCCTTTGCCTACTGTTACCGGGGCCACCAGc > 2:2247094/1‑126 (MQ=255) ccAGCCTTCTTT‑CTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGACATTACGCGTCACAGTTGTACCCGCAGCAATGGTCGCGCCTTTGCCTACTGTTACCGGGGCCACCAGCTg > 1:30944/1‑126 (MQ=255) cAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGACATTACGCGTCACAGTTGTACCCGCAGCAATGGTCGCGCCTTTGCCTACTGTTACCGGGGCCACCAGCTg > 1:1482364/1‑126 (MQ=255) cAGCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGACATTACGCGTCACAGTTGTACCCGCAGCAATGGTCGCGCCTTTGCCTACTGTTACCGGGGCCACCAGCTg < 2:814396/126‑1 (MQ=255) gCCTTCTTTACTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGACATTACGCGTCACAGTTGTACCCGCAGCAATGGTCGCGCCTTTGCCTACTGTTACCGGGGCCACCAGCTGAg < 1:2284618/126‑1 (MQ=255) ttctttacTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGACATTACGCGTCACAGTTGTACCCGCAGCAATGGTCGCGCCTTTGCCTACTGTTACCGGGGCCACCAGCTGAgtgt > 2:201586/1‑126 (MQ=255) ttctttacTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGACATTACGCGTCACAGTTGTACCCGCAGCAATGGTCGCGCCTTTGCCTACTGTTACCGGGGCCACCAGCTGAgtgt < 1:2058476/126‑1 (MQ=255) | TAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTT‑CTGAGTCTGCGGCACACGGCTGATAGCTAATGCATTTTCGCCGACATTACGCGTCACAGTTGTACCCGCAGCAATGGTCGCGCCTTTGCCTACTGTTACCGGGGCCACCAGCTGAGTGT > CP009273/3907100‑3907344 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |