| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009273 | 3,480,047 | T→A | M190K (ATG→AAG) | crp → | cAMP‑activated global transcription factor, mediator of catabolite repression |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,480,047 | 0 | T | A | 99.3% | 564.8 / ‑4.6 | 148 | M190K (ATG→AAG) | crp | cAMP‑activated global transcription factor, mediator of catabolite repression |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base A (88/59); total (88/60) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.05e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.89e-01 | |||||||||||
Only 100 of 153 total aligned reads displayed.
GAATCTGGCAAAACAACCAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGATGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTCCCCCGATGTGGC > CP009273/3479925‑3480168 | aaTCTGGCAAAACAACCAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTg > 2:2056352/1‑126 (MQ=255) tCTGGCAAAACAACCAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGa > 1:2985982/1‑126 (MQ=255) cTGGCAAAACAACCAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGaa > 1:2354437/1‑126 (MQ=255) tGGCAAAACAACCAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAg < 1:2600494/126‑1 (MQ=255) ggCAAAACAACCAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGa < 2:3021390/126‑1 (MQ=255) cAAAACAACCAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATc > 2:2266876/1‑126 (MQ=255) cAAAACAACCAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATc < 2:1354347/126‑1 (MQ=255) aaaCAACCAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAg < 2:1401601/126‑1 (MQ=255) aacaacCAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGa < 1:1722757/126‑1 (MQ=255) aacaacCAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGa < 1:1817342/126‑1 (MQ=255) aacaacCAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGa > 1:1785771/1‑126 (MQ=255) caacCAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGATGCTGGAAGATCAGAAc < 1:831807/126‑1 (MQ=255) caacCAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAAc < 2:3348176/126‑1 (MQ=255) caacCAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAAc > 1:3229457/1‑126 (MQ=255) aacCAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAAcc < 1:537313/126‑1 (MQ=255) aacCAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAAcc > 1:371641/1‑126 (MQ=255) acCAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAACCt > 2:2221652/1‑126 (MQ=255) cAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGa > 1:1351261/1‑126 (MQ=255) aGACGCTATGACTCACCCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGAt < 1:1175348/126‑1 (MQ=255) aCGCTATGACTCACCCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTTGTCAGATTGTCGGCTGTTCTNGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGAtct < 1:2800130/126‑1 (MQ=255) cGCTATGACTCACCCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGAtctc > 2:2301958/1‑126 (MQ=255) gCTATGACTCACCCGGACGGTATGCAAATCAAAATTACCCGTCGGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTcc < 2:2149664/126‑1 (MQ=255) gCTATGACTCACCCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTcc > 2:1172111/1‑126 (MQ=255) tATGACTCACCCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGc > 2:852924/1‑126 (MQ=255) aTGACTCACCCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGca > 1:2256814/1‑126 (MQ=255) aTGACTCACCCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGca < 1:2119086/126‑1 (MQ=255) gACTCACCCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGcaca > 1:424212/1‑126 (MQ=255) gACTCACCCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGcaca > 2:1705684/1‑126 (MQ=255) cTCACCCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACg > 2:810299/1‑126 (MQ=255) cTCACCCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACg < 2:524393/126‑1 (MQ=255) tCACCCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACgg > 1:437161/1‑126 (MQ=255) cACCCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACGGt > 1:1270857/1‑126 (MQ=255) ggACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAAc < 2:416777/126‑1 (MQ=255) gTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCAtcg > 1:1818945/1‑126 (MQ=255) gTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCAtcg < 1:1331219/126‑1 (MQ=255) tATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCAtcgt > 1:2709636/1‑126 (MQ=255) aTGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCAtcgtc > 2:232116/1‑126 (MQ=255) aaaTCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGttt > 1:2991560/1‑126 (MQ=255) aTCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGAANCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTAc < 1:3058058/126‑1 (MQ=255) aTCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTAc < 1:218455/126‑1 (MQ=255) cAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACgg < 1:618649/126‑1 (MQ=255) aaaaTTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGc < 1:2963547/126‑1 (MQ=255) aaaaTTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGc > 2:179482/1‑126 (MQ=255) aaaTTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCa > 2:1919315/1‑126 (MQ=255) aaaTTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCa < 1:1619781/126‑1 (MQ=255) aaaTTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCa > 1:541719/1‑126 (MQ=255) ttACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTc < 1:1120605/126‑1 (MQ=255) tACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCg < 1:1047734/126‑1 (MQ=255) cccGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGtt > 1:1104432/1‑126 (MQ=255) cccGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGtt > 1:3086416/1‑126 (MQ=255) ccGTCAGGAAATTGGTCAGATTGTCGGCTGATCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTa < 1:2727538/126‑1 (MQ=255) cGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTaa > 2:2596151/1‑126 (MQ=255) gTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAAt > 2:2340361/1‑126 (MQ=255) tCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATc > 1:983180/1‑126 (MQ=255) cAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATcc > 1:2954222/1‑126 (MQ=255) aGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATccc < 2:1972285/126‑1 (MQ=255) ggAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCg < 2:237706/126‑1 (MQ=255) ggAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCg > 2:2922336/1‑126 (MQ=255) ggAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCg > 1:612250/1‑126 (MQ=255) aaTTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCg < 2:3154725/126‑1 (MQ=255) aaTTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACGATAAAACCATCGTCGTTTACGGCACTCTTTAATCCCGTCg < 2:1686744/126‑1 (MQ=255) ttGGTCAGATTGTCGGCTGTTCTCGTGAAACCGCGGGACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGa < 2:3013570/126‑1 (MQ=255) gTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTg < 2:60399/126‑1 (MQ=255) tCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTgg < 1:396616/126‑1 (MQ=255) aTTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGcgcg > 2:1305949/1‑126 (MQ=255) aTTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGcgcg < 1:845730/126‑1 (MQ=255) tggCTGTTCTGGTGAAACAGTGGGACGCATTCTGAAGAACCTGGAAGATCAGAACCTGATCTCCGCACACGATAAAACCATCGTCGTTTACGGCATTAGTTAATCCCTTCGGAGTGGCGCGTTAcc > 2:1688507/2‑126 (MQ=255) cGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGATTTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTAcc < 1:2579666/126‑1 (MQ=255) cGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTAcc > 2:1203614/1‑126 (MQ=255) ggCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCt < 1:473164/126‑1 (MQ=255) cTGTTCTCGTGAAACCCTGGGACGCATTCTCAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTgg > 2:2783067/1‑126 (MQ=255) ttCTCGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAg > 1:1243921/1‑126 (MQ=255) tctcGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAgc > 1:2344615/1‑126 (MQ=255) tctcGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAgc < 1:2002645/126‑1 (MQ=255) tctcGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGGTACCTGGTAgc > 1:2094289/1‑126 (MQ=255) ctcGTGAAACCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTTGCGCGTTACCTGGTAgcg < 2:617409/126‑1 (MQ=255) aaaCCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCAt > 1:738786/1‑126 (MQ=255) aaCCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCAtt > 1:2502590/1‑126 (MQ=255) aCCGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGATAGCGCGCCAttt < 2:40490/126‑1 (MQ=255) ccGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCAtttt > 2:1685597/1‑126 (MQ=255) ccGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCAtttt > 2:1580816/1‑126 (MQ=255) ccGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCAtttt < 2:1356713/126‑1 (MQ=255) ccGTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCAtttt > 1:565260/1‑126 (MQ=255) gTGGGACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCT‑GTAGCGCGCCATTTTGtt < 2:927251/126‑1 (MQ=255) ggACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTc > 2:438744/1‑126 (MQ=255) ggACGCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTc > 1:1215215/1‑126 (MQ=255) aCGCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTccc < 2:2910104/126‑1 (MQ=255) aCGCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTccc > 1:2534611/1‑126 (MQ=255) gCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTccccc > 2:1736105/1‑126 (MQ=255) gCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTccccc < 2:1295744/126‑1 (MQ=255) gCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTccccc < 1:2989316/126‑1 (MQ=255) gCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTccccc < 1:2907390/126‑1 (MQ=255) gCATTCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCCGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTccccc > 2:2097087/1‑126 (MQ=255) tCTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTCCCCCGAtg > 2:1012339/1‑126 (MQ=255) cTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTCCCCCGAtgt > 2:1956421/1‑126 (MQ=255) cTGAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTCCCCCGAtgt > 1:1066701/1‑126 (MQ=255) tGAAGAAGCTGGAAGATCAGAACCTGATCTCCGCACACGGTGATACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTCCCCCGAtgtg < 2:2149819/126‑1 (MQ=255) gaagaaGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTCCCCCGAGGTgg > 1:16527/1‑126 (MQ=255) aagaagCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTCCCCCGATGTGgc > 2:2649226/1‑126 (MQ=255) aagaagCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTCCCCCGATGTGgc < 1:3367798/126‑1 (MQ=255) | GAATCTGGCAAAACAACCAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGATGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTCCCCCGATGTGGC > CP009273/3479925‑3480168 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |