BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP009273	3,723,336	T→G	K264Q (AAA→CAA)	xylA ←	D‑xylose isomerase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP009273	3,723,336	0	T	G	99.3%	557.6 / ‑4.0	141	K264Q (AAA→CAA)	xylA	D‑xylose isomerase
Reads supporting (aligned to +/- strand): ref base T (0/1); new base G (69/71); total (69/72)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.13e-01

Only 100 of 141 total aligned reads displayed.

CCAGTTGCGCATCGCCACGGTTGGCGTCGACAGAACCGAACAGGCCAAGCGCAATGGCGGTGGCTATTTCATGATGGAAAGAGTGACCTGCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTTAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCATCGTAATCATATTGATGTTTGGTCGGTTCTTGCGGTTTCGGTTCGATAAGCAACGTGCCCTGGAAACCGA  >  CP009273/3723213‑3723458

     tGCGCATCGCCACGGTTGGCGTCGACAGAACCGAACAGGCCAAGCGCAATGGCGGTGGCTATTTCATGATGGAAAGAGTGACCTGCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATctct                                                                                                                     <  1:1713361/126‑1 (MQ=255)

      gcgcATCGCCACGGTTGGCGTCGACAGAACCGAACAGGCCAAGCGCAATGGCGGTGGCTATTTCATGATGGAAAGAGTGACCTGCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCtt                                                                                                                    <  2:2603682/126‑1 (MQ=255)

         cATCGCCACGGTTGGCGTCGACAGAACCGAACAGGCCAAGCGCGATGGCTGTGGCTATTTCATGATGGAAAGAGTGACCTGCCAGCGTCGTGTGGTTAGCTTCAATGTTCAGTTGAATCTCttttt                                                                                                                 >  1:2867820/1‑126 (MQ=255)

          aTCGCCACGGTTGGCGTCGACAGAACCGAACAGGCCAAGCGCAATGGCGGTGGCTATTTCATGATGGAAAGAGTGACCTGCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTc                                                                                                                >  1:3222482/1‑126 (MQ=255)

          aTCGCCACGGTTGGCGTCGACAGAACCGAACAGGCCAAGCGCAATGGCGGTGGCTATTTCATGATGGAAAGAGTGACCTGCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTc                                                                                                                >  1:621959/1‑126 (MQ=255)

                aCGGTTGGCGTCGACAGAACCGAACAGGCCAAGCGCAATGGCGGTGGCTATTTCATGATGGAAAGAGTGACCTGCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGAcc                                                                                                          <  2:1071308/126‑1 (MQ=255)

                 cGGTTGGCGTCGACAGAACCGAACAGGCCAAGCGCAATGGCGGTGGCTATTTCATGATGGAAAGAGTGACCTGCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCa                                                                                                         >  2:396445/1‑126 (MQ=255)

                   gTTGGCGTCGACAGAACCGAACAGGCCAAGCGCAATGGCGGTGGCTATTTCATGATGGAAAGAGTGACCTGCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCaaa                                                                                                       <  1:494193/126‑1 (MQ=255)

                        cGTCGACAGAACCGAACAGGCCAAGCGCAATGGCGGTGGCTATTTCATGATGGAAAGAGTGACCTGCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGtt                                                                                                  >  2:1442539/1‑126 (MQ=255)

                         gTCGACAGAACCGAACAGGCCAAGCGCAATGGCGGTGGCTATTTCATGATGGAAAGAGTGACCTGCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGttt                                                                                                 >  2:3377573/1‑126 (MQ=255)

                         gTCGACAGAACCGAACAGGCCAAGCGCAATGGCGGTGGCTATTTCATGATGGAAAGAGTGACCTGCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGttt                                                                                                 >  2:1246940/1‑126 (MQ=255)

                           cGACAGAACCGAACAGGCCAAGCGCAATGGCGGTGGCTATTTCATGATGGAAAGAGTGACCTGCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCa                                                                                               <  1:2360940/126‑1 (MQ=255)

                            gACAGAACCGAACAGGCCAAGCGCAATGGCGGTGGCTATTTCATGATGGAAAGAGTGACCTGCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAg                                                                                              >  1:499834/1‑126 (MQ=255)

                            gACAGAACCGAACAGGCCAAGCGCAATGGCGGTGGCTATTTCATGATGGAAAGAGTGACCTGCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAg                                                                                              <  1:2254293/126‑1 (MQ=255)

                             aCAGAACCGAACAGGCCAAGCGCAATGGCGGTGGCTATTTCATGATGGAAATAGTGACCTGCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAgg                                                                                             <  2:119122/126‑1 (MQ=255)

                               aGAACCGAACAGGCCAAGCGCAATGGCGGTGGCTATTTCATGATGGAAAGAGTGACCAGCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGaa                                                                                           <  2:2073635/126‑1 (MQ=255)

                                gAATCGAACAGGCCAAGCGCAATGTCGGTTGCTGTTTCATGATGGAAAGAATGACCTGCCAGCGTCGCGAGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAg                                                                                          >  2:2868597/1‑126 (MQ=255)

                                 aaCCGAACAGGCCAAGCGCAATGGCGGTGGCTATTTCATGATGGAAAGAGTGACCTGCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGc                                                                                         >  1:1165796/1‑126 (MQ=255)

                                  aCCGAACAGGCCAAGCGCAATGGCGGTGGCTATTTCATGATGGAAAGAGTGACCTGCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGcc                                                                                        <  2:3324880/126‑1 (MQ=255)

                                    cGAACAGGCCAAGCGCAATGGCGGTGGCTATTTCATGATGGAAAGAGTGACCTGCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCAt                                                                                      >  2:300751/1‑126 (MQ=255)

                                     gAACAGGCCAAGCGCAATGGCGGTGGCTATTTCATGATGGAAAGAGTGACCTGCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATa                                                                                     <  1:3334439/126‑1 (MQ=255)

                                     gAACAGGCCAAGCGCAATGGCGGTGGCTATTTCATGATGGAAAGAGTGACCTGCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATa                                                                                     <  1:831399/126‑1 (MQ=255)

                                       aCAGGCCAAGCGCAATGGCGGTGGCTATTTCATGATGGAAAGAGTGACCTGCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGa                                                                                   <  1:2045468/126‑1 (MQ=255)

                                        cAGGCCAAGCGCAATGGCGGTGGCTATTTCATGATGGAAAGAGTGACCTGCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGAc                                                                                  <  2:525138/126‑1 (MQ=255)

                                         aGGCCAAGCGCAATGGCGGTGGCTATTTCATGATGGAAAGAGTGACCTGCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGAcc                                                                                 <  1:140400/126‑1 (MQ=255)

                                         aGGCCAAGCGCAATGGCGGTGGCTATTTCATGATGGAAAGAGTGACCTGCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGAcc                                                                                 <  2:2529212/126‑1 (MQ=255)

                                         aGGCCAAGCGCAATGGCGGTGGCTATTTCATGATGGAAAGAGTGACCTGCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGAcc                                                                                 <  2:1451557/126‑1 (MQ=255)

                                         aGGCCAAGCGCAATGGCGGTGGCTATTTCATGATGGAAAGAGTGACCTGCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGAcc                                                                                 <  1:943561/126‑1 (MQ=255)

                                           gCCAAGCGCAATGGCGGTGGCTATTTCATGATGGAAAGAGTGACCTGCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGt                                                                               <  2:700029/126‑1 (MQ=255)

                                            ccAAGCGCAATGGCGGTGGCTATTTCATGATGGAAAGAGTGACCTGCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTc                                                                              >  1:613548/1‑126 (MQ=255)

                                            ccAAGCGCAATGGCGGTGGCTATTTCATGATGGAAAGAGTGACCTGCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTc                                                                              <  1:932058/126‑1 (MQ=255)

                                            ccAAGCGCAATGGCGGTGGCTATTTCATGATGGAAAGAGTGACCTGCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTc                                                                              >  2:1833503/1‑126 (MQ=255)

                                               aGCGCAATGGCGGTGGCTATTTCATGATGGAAAGAGTGACCTGCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTcgcg                                                                           <  1:3333876/126‑1 (MQ=255)

                                               aGCGCAATGGCGGTGGCTATTTCATGATGGAAAGAGTGACCTGCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTcgcg                                                                           <  1:2010110/126‑1 (MQ=255)

                                                   cAATGGCGGTGGCTATTTCATGATGGAAAGAGTGACCTGCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCAt                                                                       >  2:1749744/1‑126 (MQ=255)

                                                    aaTGGCGGTGGCTATTTCATGATGGAAAGAGTGACCTGCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCATc                                                                      >  2:704415/1‑126 (MQ=255)

                                                      tGGCGGTGGCTATTTCATGATGGAAAGAGTGACCTGCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCATCGt                                                                    <  2:1064891/126‑1 (MQ=255)

                                                        gCGGTGGCTATTTCATGATGGAAAGAGTGGCCTGCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCATCGTaa                                                                  <  2:309456/126‑1 (MQ=255)

                                                        gCGGTGGCTATTTCATGATGGAAAGAGTGACCTGCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCATCGTaa                                                                  <  2:1338774/126‑1 (MQ=255)

                                                        gCGGTGGCTATTTCATGATGGAAAGAGTGACCTGCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCATCGTaa                                                                  >  1:2065675/1‑126 (MQ=255)

                                                         cGGTGGCTNTTTCATGATGGAAAGAGTGACATGCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTACCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCATCGTAAt                                                                 >  1:3064814/1‑126 (MQ=255)

                                                          ggTGGCTATTTCATGATGGAAAGAGTGACCTGCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCATCGTAATc                                                                >  2:3250315/1‑126 (MQ=255)

                                                            tGGCTATTTCATGATGGAAAGAGTGACCTGCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCATCGTAATCat                                                              >  1:1163800/1‑126 (MQ=255)

                                                             ggCTATTTCATGATGGAAAGAGTGACCTGCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCATCGTAATCata                                                             <  2:806729/126‑1 (MQ=255)

                                                              gCTATTTCATGATGGCAAGAGTGACCTGCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCATCGTAATCatat                                                            >  2:322069/1‑126 (MQ=255)

                                                              gCTATTTCATGATGGAAAGAGTGACCTGCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCATCGTAATCatat                                                            >  1:1996422/1‑126 (MQ=255)

                                                               cTATTTCATGATGGAAAGAGTGACCTGCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCATCGTAATCATAtt                                                           >  1:2483760/1‑126 (MQ=255)

                                                                tATTTCATGATGGAAAGAGTGACCTGCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCATCGTAATCATATTg                                                          <  2:1804278/126‑1 (MQ=255)

                                                                  tttCATGATGGAAAGAGTGACCTGCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCATCGTAATCATATTGAt                                                        >  2:2098895/1‑126 (MQ=255)

                                                                   ttCATGATGGAAAGAGTGACCTGCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCATCGTAATCATATTGATg                                                       <  2:412031/126‑1 (MQ=255)

                                                                   ttCATGATGGAAAGAGTGACCTGCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCATCGTAATCATATTGATg                                                       <  2:3183813/126‑1 (MQ=255)

                                                                     cATGATGGAAAGAGTGACCTGCCAGCGTCGTGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCATCGTAATCATATTGATGtt                                                     <  2:1980924/126‑1 (MQ=255)

                                                                      atgatgGAAAGAGTGACCTGCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCATCGTAATCATATTGATGttt                                                    >  2:2906581/1‑126 (MQ=255)

                                                                      atgatgGAAAGAGTGACCTGCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCATCGTAATCATATTGATGttt                                                    <  1:831633/126‑1 (MQ=255)

                                                                       tgatgGAAAGAGTGACCTGCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCATCGTAATCATATTGATGTTTg                                                   <  1:1481511/126‑1 (MQ=255)

                                                                        gatgGAAAGAGTGACCTGCCAGCGTTGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCATCGTAATCATATTGATGTTTgg                                                  <  2:2195467/126‑1 (MQ=255)

                                                                        gatgGAAAGAGTGACCTGCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCATCGTAATCATATTGATGTTTgg                                                  <  1:2907516/126‑1 (MQ=255)

                                                                         atgGAAAGAGTGACCTGCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCATCGTAATCATATTGATGTTTGGt                                                 <  1:231845/126‑1 (MQ=255)

                                                                          tgGAAAGAGTGACCTGCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCATCGTAATCATATTGATGTTTGGTc                                                <  2:2349512/126‑1 (MQ=255)

                                                                            gAAAGAGTGACCTGCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCATCGTAATCATATTGATGTTTGGTCgg                                              <  1:892437/126‑1 (MQ=255)

                                                                            gAAAGAGTGACCTGCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCATCGTAATCATATTGATGTTTGGTCgg                                              <  2:1533394/126‑1 (MQ=255)

                                                                                gagTGACCTGCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCATCGTAATCATATTGATGTTTGGTCGGTTCt                                          <  1:2448690/126‑1 (MQ=255)

                                                                                 agTGACCTGCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCATCGTAATCATATTGATGTTTGGTCGGTTCtt                                         >  1:2826885/1‑126 (MQ=255)

                                                                                 agTGACCTGCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCATCGTAATCATATTGATGTTTGGTCGGTTCtt                                         <  2:2627988/126‑1 (MQ=255)

                                                                                  gTGACCTGCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCATCGTAATCATATTGATGTTTGGTCGGTTCTTg                                        <  1:1597920/126‑1 (MQ=255)

                                                                                   tGACCTGCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCATTTTCCAGTCCAAACTGTTTCTGGAAGACATAGACCCTCGCGGCTTCGGTATCCTATTGATATTTGGTCGGTCCCTGc                                       <  2:2871512/126‑1 (MQ=255)

                                                                                     aCCTGCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCATCGTAATCATATTGATGTTTGGTCGGTTCTTGCgg                                     >  2:393453/1‑126 (MQ=255)

                                                                                         gCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCATCGTAATCATATTGATGTTTGGTCGGTTCTTGCGGTTTc                                 <  2:1932646/126‑1 (MQ=255)

                                                                                         gCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCATCGTAATCATATTGATGTTTGGTCGGTTCTTGCGGTTTc                                 <  1:3377573/126‑1 (MQ=255)

                                                                                         gCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCATCGTAATCATATTGATGTTTGGTCGGTTCTTGCGGTTTc                                 >  2:533592/1‑126 (MQ=255)

                                                                                           cAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCATCGTAATCATATTGATGTTTGGTCGGTTCTTGCGGTTTCgg                               >  1:894822/1‑126 (MQ=255)

                                                                                           cAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCATCGTAATCATATTGATGTTTGGTCGGTTCTTGCGGTATCgg                               <  2:2323154/126‑1 (MQ=255)

                                                                                            aGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCATCGTANTCATATTGATGTTTGGTCGGTTCTTGCGGTTTCGGt                              >  2:3061302/1‑126 (MQ=255)

                                                                                            aGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCATCGTAATCATATTGATGTTTGGTCGGTTCTTGCGGTTTCGGt                              >  2:1766311/1‑126 (MQ=255)

                                                                                            aGCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCATCGTAATCATATTGATGTTTGGTCGGTTCTTGCGGTTTCGGt                              >  2:554367/1‑126 (MQ=255)

                                                                                             gCGTCGCGTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCATCGTAATCATATTGATGTTTGGTCGGTTCTTGCGGTTTCGGtt                             <  2:613548/126‑1 (MQ=255)

                                                                                                   cgTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCATCGTAATCATATTGATGTTTGGTCGGTTCTTGCGGTTTCGGTTCGATaa                       >  1:711154/1‑126 (MQ=255)

                                                                                                    gTGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCATCGTAATCATATTGATGTTTGGTCGGTTCTTGCGGTTTCGGTTCGATAAg                      >  1:2331254/1‑126 (MQ=255)

                                                                                                     tGGTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCATCGTAATCATATTGATGTTTGGTCAGTTCTTGCGGTTTCGGTTCGATAAGc                     >  1:776760/1‑126 (MQ=255)

                                                                                                       gTTAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCATCGTAATCATATTGATGTTTGGTCGGTTCTTGCGGTTTCGGTTCGATAAGCaa                   <  2:342948/126‑1 (MQ=255)

                                                                                                        ttAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCATCGTAATCATATTGATGTTTGGTCGGTTCTTGCGGTTTCGGTTCGATAAGCAAc                  <  1:680798/126‑1 (MQ=255)

                                                                                                        ttAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCATCGTAATCATATTGATGTTTGGTCGGTTCTTGCGGTTTCGGTTCGATAAGCAAc                  <  1:2861840/126‑1 (MQ=255)

                                                                                                         tAGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCATCGTAATCATATTGATGTTTGGTCGGTTCTTGCGGTTTCGGTTCGATAAGCAACg                 >  2:549063/1‑126 (MQ=255)

                                                                                                          aGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCATCGTAATCATATTGATGTTTGGTCGGTTCTTGCGGTTTCGGTTCGATAAGCAACGt                <  2:1363690/126‑1 (MQ=255)

                                                                                                          aGCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCATCGTAATCATATTGATGTTTGGTCGGTTCTTGCGGTTTCGGTTCGATAAGCAACGt                <  1:1313559/126‑1 (MQ=255)

                                                                                                           gCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCATCGTAATCATATTGATGTTTGGTCGGTTCTTGCGGTTTCGGTTCGATAAGCAACGTg               <  1:1560697/126‑1 (MQ=255)

                                                                                                           gCTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCATCGTAATCATATTGATGTTTGGTCGGTTCTTGCGGTTTCGGTTCGATAAGCAACGTg               >  2:873178/1‑126 (MQ=255)

                                                                                                            cTTCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCATCGTAATCATATTGATGTTTGGTCGGTTCTTGGGGTTTCGGTTCGATAAGCAACGTGc              >  2:2698936/1‑126 (MQ=255)

                                                                                                             ttCAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCATCGTAATCATATTGATGTTTGGTCGGTTCTTGCGGTTTCGGTTCGATAAGCAACGTGcc             >  2:1757249/1‑126 (MQ=255)

                                                                                                              tCAATGTTCAGTTGAATCTCTTTTTCCAGCCCATACTGTTTCAGGAAGCCATAGACCGTCGCGGCATCGTAATCATATTGATGTTTGGTCGGTTCTTGCGGTTTCGGTTCGATAAGCAACGTGccc            >  2:2864818/1‑126 (MQ=255)

                                                                                                               cAATGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCATCGTAATCATATTGATGTTTGGTCGGTTCTTGCGGTTTCGGTTCGATAAGCAACGTGCCCt           >  2:3339130/1‑126 (MQ=255)

                                                                                                                 aTGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCATCGTAATCATATTGATGTTTGGTCGGTTCTTGCGGTTTCGGTTCGATAAGCAACGTGCCCTgg         >  1:564968/1‑126 (MQ=255)

                                                                                                                  tGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCATCGTAATCATATTGATGTTTGGTCGGTTCTTGCGGTTTCGGTTCGATAAGCAACGTGCCCTGGa        >  2:2523353/1‑126 (MQ=255)

                                                                                                                  tGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCATCGTAATCATATTGATGTTTGGTCGGTTCTTGCGGTTTCGGTTCGATAAGCAACGTGCCCTGGa        >  2:1947948/1‑126 (MQ=255)

                                                                                                                  tGTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCAGCGTAATCATATTGATGTTTGGTCGGTTCTTGCGGTTTCGGTTCGATAAGCAACGTGCCCTGGa        >  2:2351518/1‑126 (MQ=255)

                                                                                                                   gTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCATCGTAATCATATTGATGTTTGGTCGGTTCTTGCGGTTTCGGTTCGATAAGCAACGTGCCCTGGaa       >  2:2285060/1‑126 (MQ=255)

                                                                                                                   gTTCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCATCGTAATCATATTGATGTTTGGTCGGTTCTTGCGGTTTCGGTTCGATAAGCAACGTGCCCTGGaa       >  2:1132508/1‑126 (MQ=255)

                                                                                                                    ttCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCATCGTAATCATATTGATGTTTGGTCGGTTCTTGCGGTTTCGGTTCGATAAGCAACGTGCCCTGGaaa      >  1:1160220/1‑126 (MQ=255)

                                                                                                                    ttCAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCATCGTAATCATATTGATGTTTGGTCGGTTCTTGCGGTTTCGGTTCGATAAGCAACGTGCCCTGGaaa      >  1:1769684/1‑126 (MQ=255)

                                                                                                                      cAGTTGAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCATCGTAATCATATTGATGTTTGGTCGGTTCTTGCGGTTTCGGTTCGATAAGCAACGTGCCCTGGAAAcc    >  1:2805660/1‑126 (MQ=255)

CCAGTTGCGCATCGCCACGGTTGGCGTCGACAGAACCGAACAGGCCAAGCGCAATGGCGGTGGCTATTTCATGATGGAAAGAGTGACCTGCCAGCGTCGCGTGGTTAGCTTCAATGTTCAGTTTAATCTCTTTTTCCAGACCAAACTGTTTCAGGAAGCCATAGACCGTCGCGGCATCGTAATCATATTGATGTTTGGTCGGTTCTTGCGGTTTCGGTTCGATAAGCAACGTGCCCTGGAAACCGA  >  CP009273/3723213‑3723458

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`