New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | CP009273 | 4252643 = | 59 (1.720) | 4 (0.130) | 4/302 | 2.4 | 6.7% | intergenic (+9/‑125) | dusA/pspG | tRNA‑dihydrouridine synthase A/phage shock protein G |
? | CP009273 | 4252787 = | 57 (1.780) | coding (20/243 nt) | pspG | phage shock protein G | |||||
Rejected: Frequency below/above cutoff threshold. |
CGGTAGACCGGGAGATCTTTGGTTCCTCGGATACCGATGCCGATCCGGTGGCGGTAGTGCGCGCCATGTATCCGTACATTGAGCGTGAACTCAGCCAGGGGACGTATCTCGGCCATATTACCCGGCATATGTTGGGCTTGTTCCAGGGTATTCCTGGCGCGCGGCAGTGGCGGCGTTATTTAAGTGAAAATGCCCATAAAGCGGGTGCAGACATTAATGTGCTGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCATGATTCTTGTAATGCCAGCAAGAGATTTCATATTTGGGAGAGCATCATGCTGGAACTACTTTTTGTGATTGGCTTTTTTGTCATGCTGATGGTCACCGGCGTTTCGTTGCTGGGCATTATCGCCGCGCTGGTTGTGGCGACGGCCATTATGTTCCTCGGCGGTATGCTGGCATTGATGATTAAGTTGCTGC > CP009273/4252375‑4252912 | tttctaaggataaaaccttaggttgtgatcatcctcacaatcccttagtaacgccagcggtcataacgctgatatttcggcacttttggtgctttaatcgccttaataacccacaccaccgcaatcgccagtagtaaccacggcagcaacttaatcatcaatgccagcataccgccgaggaacataatggccgtcgccacaaccagcgcggcgataatgcccagcaacgaaacgccggtgaccatcagcatgacaaaaaagccaatcaCAAAAag > 1:223731‑M1/269‑275 (MQ=255) ttctaaggataaaaccgtaggttgtgatcatccgcacaatcccttagtaacgccagcggtcataacgctgatatttcggcacttttggtgctttaatcgccttaataacccacaccaccgcaatcgccagtagtaaccacggcagcaacttaatcatcaatgcctgcataccgccgaggaacanaatggccgtcgccacaaccagcgcggcgataatgcccagcaacgaaacgacggtgaccatcagcaagacaaaaaagccaaacaCAAAAag < 1:516232‑M1/7‑1 (MQ=255) gATACCGNGGCCGATCCGGGGCCGGTCGTTCGCGCCATGTATCCCTACATTTAGCTTGAATTCAGCCAGGGGACGTCTCTCGGCCATATTCCCCGGCATATGTTGGGCTTGTTCCAGGGTATTCCTGGCGCGCGGCAGTTGCGGCGTTATTTAAGTGAACATGCCCATAAAGCGGGTGCAGACATTAATGTGCTGGAACACGCGCTCAAACTTGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCAc < 2:269565/273‑1 (MQ=255) aTCCGTACATTGAGCGTGAACTCAGCCAGGGGACGTATCTCGGCCATATTACCCGGCATATGTTGGGCTTGTTCCAGGGTATTCCTGGCGCGCGGCAGTGGCGGCGTTATTTAAGTGAAAATGCCCATAAAGCGGGTGCAGACATTAATGTGCTGGTACACGCGCTCAAACTGGTGGCGGATAAGCGGTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGACGTTTTGCTTTTAACTCAATAGATTATTTATg > 1:107621/1‑275 (MQ=255) aGCGTGAACTCAGCCAGGGGACGTATCTCGTCGATATTACCCGGCATATGTTGGGCTTGTTCCAGGGTATTCCTGGCGGGCGGCAGTGGCGGCGTTATTTAAGTGAAAATGCCCATAAAGCGCGTGCAGACATTAATGTGCTGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAACTCAATAGATTATTTTTGGCATGATTCTTg > 1:144617/1‑275 (MQ=255) aGCGTGAACTCAGCCAGGGGACGTATCTCGGCCATATTACCCGGCATATGTTGGGCTTGTTCCAGGGTATTCCTGGCGCGCGGCAGTGGCGGCGTTATTTAAGTGAAAATGCCCATAAAGCGGGTGCAGACATTAATGTGCTGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAAtt > 1:581610/1‑204 (MQ=255) aGCGTGAACTCAGCCAGGGGACGTATCTCGGCCATATTACCCGGCATATGTTGGGCTTGTTCCAGGGTATTCCTGGCGCGCGGCAGTGGCGGCGTTATTTAAGTGAAAATGCCCATAAAGCGGGTGCAGACATTAATGTGCTGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTcac > 2:520519/1‑207 (MQ=255) tGAACTCAGCCAGGGGACGTATCTCGGCCATATTACCCGGCATATGTTGGGCTTGTTCCAGGGTATTCCTGGCGCGCGGCAGTGGCGGCGTTATTTAAGTGAAAATGCCCATAAAGCGGGTGCAGACATTAATGTGCTGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTcacc < 2:581601/204‑1 (MQ=255) aaCTCAGCCAGGGGACGTATCTCGGCCATATTACCCGGCATATGTTGGGCTTGTTCCAGGGTATTCCTGGCGCGCGGCAGTGGCGGCGTTATTTAAGTGAAAATGCCCATAAAGCGGGTGCAGACATTAATGTGCTGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAag > 1:153793/1‑188 (MQ=255) cAGCCAGGGGACGTATCTCGGCCATATTACCCGGCATATGTTGGGCTTGTTCCAGGGTATTCCTGGCGCGCGGCAGTGGCGGCGTTATTTAAGTGAAAATGCCCATAAAGCGGGTGCAGACATTAATGTGCTGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAagtagt < 2:153792/188‑1 (MQ=255) ggCCATATTACCCGGCATATGTTGGGCTTGTTCCAGGGTATTCCTGGCGCGCGGCAGTGGCGGCGTTATTTAAGTGAAAATGCCCATAAAGCGGGTGCAGACATTAATGTGCTGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTg > 2:206510/1‑187 (MQ=255) ggCCATATTACCCGGCATATGTTGGGCTTGTTCCAGGGTATTCCTGGCGCGCGGCAGTGGCGGCGTTATTTAAGTGAAAATGCCCATAAAGCGGGTGCAGACATTAATGTGCTGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGAACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCATGATTCTTGTAATGCCAGAAAGAGATTTAATATATggg > 1:77517/1‑275 (MQ=255) atatTACCCGGCATATGTTGGGCTTGTTCCAGGGTATTCCTGGCGCGCGGCAGTGGCGGCGTTATTTAAGTGAAAATGCCCATAAAGCGGGTGCAGACATTAATGTGCTGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCa < 1:206512/187‑1 (MQ=255) cGGCATATGTTGGGCTTGTTCCAGGGTATTCCTGGCGCGCGGCAGTGGCGGCGTTATTTAAGTGAAAATGCCCATAAAGCGGGTGCAGACATTAATGTGCTGGAACACGCGCTCAAACTGGGGGCGGATAAGCGTTAACTTTTCACCAAAAag > 2:432109/1‑153 (MQ=255) aatatGTGGGGCTTGTTCGAGGGTATTTCTGGCGCGCGGGTGTGGCGGCGTTATTTAAGTGTAAATGCCCATAAAGCGAGTGCAGACATTATTGTGCTGGAACACGAGCTCAAACTGGTGGCGGATAAGCGTTAACTATTCACCaa > 1:413143/2‑146 (MQ=255) atatGTTGGGCTTGTTCCAGGGTATTCCTGGCGCGCGGCAGTGGAGGCGTTATTTAAGTGAAAATGCCCATAAAGCGGGTGCAGACATTAATGTGCTGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAagtagt < 1:432114/153‑1 (MQ=255) ttagtttcctgattCCAGGGTATGCCTGGCGCGCGGCAGTGTCGGCGTTATTTAAGTGAAAAGGCCCATAAAGCGGGTGCAGACATTAATGTGCTGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGTACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCATGATTCTTGTAATGCCAGCAAGAGATTTCATATTTGGGAGAGCATCATGCTGGaa < 2:144616/262‑1 (MQ=255) tGTTGGGCTTGTTCCAGGGTATTCCTGGCGCGCGGCAGTGGCGGCGTTATTTAAGTGAAAATGCCCATAAAGCGGGTGCAGACATTAATGTGCTGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCATGATTCTTGTAATGCCAGCAAGAGAtt < 1:318466/245‑1 (MQ=255) gTTGGGCTTGTTCCAGGGTATTCCTGGCGCGCGGCAGTGGCGGCGTTATTTAAGTGAAAATGCCCATAAAGCGGGTGCAGACATTAATGTGCTGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCATGATTCTTGTAATGCCAGCAaga > 1:356627/1‑240 (MQ=255) taaccacggcagcaacttaatcatcaatgccagcataccgccgaggaacataatggccgtcgccacaaccagcgcggcgataatgcccagcaacgaaacgccggtgaccatcagcatgacaaaaaagccaatcaCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCATGATTCTTGTAATGCCAGCAAGAGATTTCat < 2:585141‑M1/110‑1 (MQ=255) ggCTTGTTCCAGGGTATTCCTGGCGCGCGGCAGTGGCGGCGTTATTTAAGTGAAAATGCCCATAAAGCGGGTGCAGACATTAATGTGCTGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTaaa > 1:227728/1‑193 (MQ=255) ggCTTGTTAAAGGGTATTCCTGGCGCGCGGCAGTGGCGGCGTTATTTAAGTGAAAATGCCCATAAAGCGGGTGCAGACATTAATGTGCTGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCATGATTCTTGTAATGCCAGCAAGAGAtt < 2:356623/240‑1 (MQ=255) gCTTGTTCCAGGGTATTCCTGGCGCGCGGCAGTGGCGGCGTTATTTAAGTGAAAATGCCCATAAAGCGGGTGCAGACATTAATGTGCTGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTg > 2:589429/1‑162 (MQ=255) tGTTCCAGGGTATTCGTGGCGCGCGGCAGTGGCGGCGTTATTTAAGTGAAAATGCCCATAAAGCGGGTGCAGACATTAATGTGCTGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTNCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCATGATTCTTGTAATGCCAGCAAGAGATTTCATATTTGGGAGAGCATCATGCTGGAACTACTTTTtgt > 1:599021/1‑275 (MQ=255) tGTTCCAGGGTATTCCTGGCGCGCGGCAGTGGCGGCGTTATTTAAGTGAAAATGCCCATAAAGCGGGTGCAGACATTAATGTGCTGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCaa < 2:227725/193‑1 (MQ=255) cacggcagcaacttaatcatcaatgccagcataccgccgaggaacataatggccgtcgccacaaccagcgcggcgataatgcccagcaacgaaacgccggtgaccatcagcatgacaaaaaagccaatcaCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCATGATTCTTGTAATGCCAGCAAGAGATTTCATAttt > 1:585150‑M1/131‑244 (MQ=255) gTTCCAGGGTATTCCTGGCGCGCGGCAGTGGCGGCGTTATTTAAGTGAAAATGCCCATAAAGCGGGTGCAGACATTAATGTGCTGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCa < 1:589438/162‑1 (MQ=255) gTTCCAGGGTATTCCTGGCGCGCGGCAATGGCGGCGTTATTTAAGTGAAAATGCCCATAAAGCGGGTGCAGACATTAATGTGCTGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCCTGATTCTTGTAATTCCAGCAAGAGATTCCATATTTGGGGGAGAATAATGCTGGAACTACTTTTtgt > 1:175976/1‑274 (MQ=255) acttaatcatcaatgccagcataccgccgaggaacataatggccgtcgccacaaccagcgcggcgataatgcccagcaacgaaacgccggtgaccatcagcatgacaaaaaagcccatcaCaa < 1:6347‑M1/3‑1 (MQ=255) ttCCTGGCGCGCGGCAGTGGCGGCGTTATTTAAGTGAAAATGCCCATAAAGCGGGTGCAGACATTAATGTGCTGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTcacca > 2:375092/1‑140 (MQ=255) ttCCTGGCGCGCGGCAGTGGCGGCGTTATTTAAGTGAAAATGCCCATAAAGCGGGTGCAGACATTAATGTCCTGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCACTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCATGATTTTTGTAATGCCAGCAAGCGATTTCATATTTGGGAGATCAAACTGCTGGAACTACTTTTTGTGATTGTCttttt > 2:592264/1‑275 (MQ=255) aatcatcaatgccagcatagcggcgaagaaaataatggccgtcgacacaaccagaggggcgataatgccgagcaacgaaacgccggtgaccatcagcatgacaaaaaagccaatcaCAAAAag > 2:6346‑M1/117‑123 (MQ=255) tGGCGCGCGGCAGTGGCGGCGTTATTTAAGTGAAAATGCCCATAAAGCGGGTGCAGACATTAATGTGCTGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGcc < 1:375096/140‑1 (MQ=255) ggCGCGCGGCAGTGGCGGCGTTATTTAAGTGAAAATGCCCATAAAGCGGGTGCAGACATTAATGTGCTGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAGATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCATTAGATTATTTTTGGCATGATTCTTTTAATGCCAGAAAGAGCGTTAAGATTTTGGAGTGCATCATTATTTAACTACTTTTTGTGTTAGtttttttttttt > 2:313630/1‑271 (MQ=255) gcgcgcGGCCGTGGCGGCGTTATTTAAGTGAAAATGCCCATAAAGCGGGTGCAGACATTAATGTGCTGGCACCCGCGCTCAAACAGGTGGCGGATAAGCGTTAACTCTTCACAAAAATGTCTGCCCATTCACAACGCACTGAGCACTGTCTCGGGACGATTTTCTATTAACTACATAGCTTATTTTTAGCCTGCTTCTTGTAATGCCAGCAAGGACTTTAATATATGTGAGAGAAGCATGCCGGAACTGACTTTAGTGATNTTTTTTCTTGTCag > 2:520488/1‑274 (MQ=255) gcgcgcGGCAGTGGCGGCGTTATTAAAGTGAAAATGCCCATAAAGCGGGTGCAGACATTAATGTGCTGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCATGATTCTTg > 1:488252/1‑200 (MQ=255) gcgGCAGTGGCGGCGTTATTTAAGTGAAAATGCCCATAAAGCGGGTGCAGACATTAATGTGCTGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCATGATTCTTGTAAt < 2:488245/200‑1 (MQ=255) gcgggcgcttcaaGCGGGTGCCTACATTCATGTGCGGGAACCCTTGCTCACACTGGTGGCGGATAAGCGTTTACTTTTCACCAAAAAGTAGGCAAGTTTACCACGCCGTGCGCACCGTCGCGGGACGTTTTGCTGTTCAATCGATGGATTATTGTTGGTATGAGTCTTGTCATGCCAGCAAGGGGTGTCATTTTTGGGAGAGCATCATGCTGGAACTACTTTTTGTGATTGGCTTCTTGGTCATGCTGATGGTCACCGGCGTTTCGGTGCTggg < 2:107620/263‑1 (MQ=255) aaTGCCCATAAAGCGGGTGCAGACATTAATGTGCTGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGAATGATTCTTGTAATGCCAGCAAGAGATTTCATATTTGGGAGAGCATCATGCTGGAACTACTTTTTGTGATTGGCTTTTTTGTCATGCTGATGGTCACTGGGGTTTCGTTGCTga > 1:344617/1‑271 (MQ=255) aaccagcgcggcgataatgcccagcaacgaaacgccggtgaccatcagcatgacaaaaaagccaatcaCaa < 2:5023‑M1/3‑1 (MQ=255) agcgcggcgataatgcccagcaacgaaacgccggtgaccatcagcatgacaaaaaagccaatcaCAAAAag > 1:5024‑M1/65‑71 (MQ=255) tAATGTGCTGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCATGATTCTTGTAATGCCAGCAAGAGATTTCATATTTGGGAGAGCATCATGCTGGAACTACTTTTTGTGATTGGCTTTTTTGTCATGCTGATGGTCACCGGCGTTTCGTTGATGGGCATTATCGTGGCGCTTGtgggggtgagg > 2:129230/1‑265 (MQ=255) gCTGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCATGATTCTTGTAATGCCAGCAAGAGATTTCATATTTGGGAGCGCATCATGCTGGAACTACTTTTTGTGATTGGCTTTTTTGTCATGCTGATGGTCACCGGCGTTTCGTGGCTGGGCTTTATCACCGCTCTTTTtgtctttttttccttt > 2:535482/1‑262 (MQ=255) ttgAACACGCGCTCAAACTGGTGTCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCTCCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCATGATTCTTGTAATGCCAGCAAGAGATTTCATATTTGGGAGAGCATCATGCTGGAACTACTTTTTGTGATTGGCTTTTTTGTCATGCTGATGGTCACCGGCGTTTCGTTGCTGGGCATTATCGCCGCGCTGGTTGTGGCGACGGCCATTa < 1:129231/272‑1 (MQ=255) tGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAagtagt > 2:319611/1‑57 (MQ=255) tGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCg > 1:568661/1‑92 (MQ=255) tGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCa > 1:166777/1‑125 (MQ=255) tGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCATGATTCTTGTAATGCCAGCAAGAGATTTCATATTTGGGAGAGCATCATGCTGGAACTACTTTTTGTGATTGGCTTTTTTGTCATGCTGATGGTCACCGGCGTTTCGtt > 2:273556/1‑233 (MQ=255) tGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCATGATTCTTGTAATGCCAGCAAGAGATTTCATATTTGGGAGAGCATCATGCTGGAACTACTTTTTGGGATTGGCTTTTTTGTCATGCTGATGGTCACCGGCGTTTCGTTGCTGGGGATTATGGCCGCGTGGGTTGTGGTCAGGGCtattat > 2:159631/1‑275 (MQ=255) ggAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCATGATTCTTGTAATGCCAGCAAGAGATTTCATATTTGGGAGAGCATCATGCTGGAACTACTTTTTGTGATTGGCTTTTTTGTCATGCTGATGGTCACCGGCGTTTCGTTGCTGGGCATTATCGCCGCGCTGGTTGTGGCGACGGCCATTATg < 2:599012/275‑1 (MQ=255) acacGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCaaa < 1:319615/57‑1 (MQ=255) acacGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGtttt < 2:568652/92‑1 (MQ=255) acacGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCATTAt < 2:166776/125‑1 (MQ=255) acacGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCATGATTCTTGTAATGCCAGCAAGAGATTTCATATTTGGGAGAGCATCATGCTGGAACTACTTTTTGTGATTGGCTTTTTTGTCATGCTGATGGTCACCGGCGTTTCGTTGCTg < 1:273560/233‑1 (MQ=255) ggcacggcacaccggtggCCGAGANGCGTTAACTGTTCACCAAAAGATACTCTGAGGCACCGCGCCCGGCGCAGCGTCGCGTGGTGTGTTGCAGGTAGATCTATAGAGTATTTTGGGCATGATTCTTGTAGTGCCAGCAAGAGATGTCATAGTGGGGAGAGAATCAGGGTGGAACTACTTTTTGGGATCGGCTTTTTGGTGATGCGGATGGTAACCGGCGTTTCGTTGCCGGGGATTATCGCGGCGCTGGTTGTGGCGACGGCCATTATGTTCCt < 2:403077/262‑1 (MQ=255) cgcgCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCATGATTCTTGTAATGCCAGCAAGAGATTTCATATTTGGGAGAGCATCATGCTGGAACTACTTTTTGTGATTGGCTTTTTTGTCATGCTGATGGTCCCCGGCGTTTCGTTGCTGGGTATTATCTCCGTGGTGGTTGTGTCGAGGGCCAtgcgtttcgc > 2:99028/1‑265 (MQ=255) aacgccggtgaccatcagcatgacaaaaaagccaatcaCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGc < 2:474158‑M1/78‑1 (MQ=255) ggcTTAAACGTGTGTCGGATAATCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGGGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCANGATTCTTGTAAGGCCAGCAAGAGATTTCATATTTGGGAGAGCATCATGCTGGAACTACTTTTTGTGATTGGCTTTTTTGTCATGCTGATGGTCACCGGCGTTTCGTTGCTGGGCATTATCGCCGCGCTGGTTGTGGCGACGGCCATTATGTTCCTcgg < 1:592273/274‑1 (MQ=255) tCAAGCTGGTGTCGGATTAGCTTTAACTTTTCACCAAAAATTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCGTGATTCTTGTAATGCCAGCAAGAGATTTCATATTTGGGAGAGCATCATGCTGGAACTACTTTTTGTGATTGGCTTTTTTGTCATGCTGATGGTCACCGGCGTTTCGTTGCTGGGCATTATCGCCGCGCTGGTTGTGGCGACGGCCATTATGTTCCTcggcg < 1:288243/274‑1 (MQ=255) tCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTg > 2:401619/1‑110 (MQ=255) ccggtgaccatcagcatgacaaaaaagccaatcaCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCCGTTAAATAAATAGCTTATTTTTGGCATGa > 1:474165‑M1/35‑116 (MQ=255) aaaCTGGTGGCGGATAAGCGTTAACTTTTCTCCAACAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCATGATTCTTGTAATGCCAGCAAGAGATTTCATATTTGGGTGAGCATCATGCTGGAACTACTTTTTGTGATTGGTTTTTTTGTCATGCTGATGGTCACCGGCGTTTCGTTGCTGGGCATTATCGCCGCGCTGGTTGTGGCGACGGCCATTATGTTCCTCGGCGGt < 1:293772/274‑1 (MQ=255) aCTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCAt < 1:401623/110‑1 (MQ=255) cTGATGGCGANTTAGCGTTTACTTTTCACCAAATAGTAGTCACATTCACCATGCCCTTCGCACCGTCTCGTGTCGTTTTGCTGTTAAATCAATTGATTATTTTTTGCATGATTCTTGTAATGCCAGCAAGAGATTTCATATTTTTGAGAGCATCATGCTGGCACTACTTTTTGTGATTGGCTTTTTTGTCATGCTGATGGTCACCGGCGTTTCGTTGCTGGGCCTTATCGCCGCGCTGGTTGTGGCGGCGGCCATTATGTTCCTCGGCGGTATg < 2:77516/274‑1 (MQ=255) gATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTg > 1:266136/1‑96 (MQ=255) gATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCATGATTCTTGTAATGCCAGCAAGAGATTTCATATTTGGGAGAGCATCATGCTGGAACTACTTTTTGTGATTGGCTTTTTTGTCATGCTGATGGTCACCGGCGTTTCGTTGCTGGGCATTATCGCCGCGCTGGTTGTGGCTACGGCCATTATGTTCCTCGGCGTTATGCTGTCAtta > 1:95573/1‑273 (MQ=255) aGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCAt < 2:266132/96‑1 (MQ=255) ttCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCATGATTCTTGTAATGCCAGCAAGAGATTTCATATTTGGGAGAGCATCATGCTGGAACTACTTTTTGTGATTGGCTTTTTTGTCATGCTGATGGTCACCGGCGTTTCGTTGCTGGGCATTCTCGCCGCGCTGGTTGTGGCGACGGCCATTATGTTCCTTGGCGGTCTGTTTGCATTGATGAGTAAGTtgctgc > 1:295219/1‑275 (MQ=255) tCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCATGATTCTTGTAATGCCAGCAAGAGATTTCATATTTGGgaga > 1:47521/1‑124 (MQ=255) CAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCATGATTCTTGTAATGCCAGCAAGAGATTTCATATTTGGGAGAGcat > 2:47520‑M1/1‑124 (MQ=255) | CGGTAGACCGGGAGATCTTTGGTTCCTCGGATACCGATGCCGATCCGGTGGCGGTAGTGCGCGCCATGTATCCGTACATTGAGCGTGAACTCAGCCAGGGGACGTATCTCGGCCATATTACCCGGCATATGTTGGGCTTGTTCCAGGGTATTCCTGGCGCGCGGCAGTGGCGGCGTTATTTAAGTGAAAATGCCCATAAAGCGGGTGCAGACATTAATGTGCTGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAACTTTTCACCAAAAAGTAGTCAAATTCACCACGCCCTGCGCACCGTCGCGGGGCGTTTTGCTGTTAAATCAATAGATTATTTTTGGCATGATTCTTGTAATGCCAGCAAGAGATTTCATATTTGGGAGAGCATCATGCTGGAACTACTTTTTGTGATTGGCTTTTTTGTCATGCTGATGGTCACCGGCGTTTCGTTGCTGGGCATTATCGCCGCGCTGGTTGTGGCGACGGCCATTATGTTCCTCGGCGGTATGCTGGCATTGATGATTAAGTTGCTGC > CP009273/4252375‑4252912 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |