New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	4438528 =	54 (1.570)	4 (0.120)	4/308	2.4	8.1%	coding (20/351 nt)	chpB	toxin of the ChpB‑ChpS toxin‑antitoxin system
	?	CP009273	4438623 =	40 (1.230)					coding (115/351 nt)	chpB	toxin of the ChpB‑ChpS toxin‑antitoxin system
Rejected: Frequency below/above cutoff threshold.

AGGCGCAAGTGAGCAACAATCAACTGATTCTGACACCCATCTCCAGGCGCTACTCGCTTGATGAACTGCTGGCACAGTGTGACATGAACGCCGCGGAACTTAGCGAGCAGGATGTCTGGGGTAAATCCACCCCTGCGGGTGACGAAATATGGTAAAGAAAAGTGAATTTGAACGGGGAGACATTGTGCTGGTTGGCTTTGATCCAGCAAGCGGCCATGAACAGCAAGGTGCTGGTCGACCTGCGCTTGTGCTCTCCGTTCAAGCCTTTAATCAACTGGGAATGACGCTGGTGGCCCCCATTACGCAGGGCGGAAATTTTGCCCGTTATGCCGGATTTAGCGTTCCTTTACATTGCGAAGAAGGCGATGTGCACGGCGTGGTGCTGGTGAATCAGGTGCGGATGATGGATCTACACGCCCGGCTGGCAAAGCGTATTGGTCTGGCTGCGGATGAGGTGGTGGAAGAGGCGTTATTACGCTTGCAGGCGGTGGTGGAATAAGGTGTG  >  CP009273/4438361‑4438865                                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                   aGGCGCAATTGAGCAACAATCAACTGATTCTGACACCCATCTCCAGGCGCTACTCGCTTGATGAACTGCTGGCACAGTGTGACATGAACGCCGCGGAACTTAGCGAGCAGGATGTCTGGGGTAAATCCACCCCTGCGGGTGACGAAATATGGTAAAGAAAAGTGAATTTGAACGGGGAGACATTGTGCTGGTTGGCTTTGATCCAGCAAGCGGCCATGAACAGCAAGGTGCTGGTCGACCTGCGCTTGTGCTCTCCGTTCAAGCCTTTAATCAAc                                                                                                                                                                                                                                        <  1:188327/275‑1 (MQ=255)                              cTGACCCCCATCTCCAGGCGCTACTCGCTTGATGAACTGCTGGCACAGTGTGACATGAACGCCGCGGAACTTAGCGAGCAGGATGTCTGGGGTAAATGCACCCCTGCGGGTGACGAAATATGGTAAAGAAAAGTGAATTTGAACGGGGAGACATTGTGCTGGTTGGCTTTGATCCAGCAAGCGGCCATGAACAGCAAGGTGCTGGTCGACCTGCGCTTGTGCTCTCCGTTCAAGCCTTTAATCAACTGGGAATGACGCTGGTGGCCCCCATTACg                                                                                                                                                                                                           <  1:374182/275‑1 (MQ=255)                              cTGACACCCATCTCCAGGCGCTACTCGCTTGATGAACTGCTGGCACAGTGTGACATGAACGCCGCGGAACTTAGCGAGCAGGATGTCTGGGGTAAATCCACCCCTGCGGGTGACGAAATATGGTAAAGAAAAGTGAATTTGAACGGGGAGACATTGTGCTGGTTGGCTTTGATCCAGCAAGCGGCCATGAACAGCAAGGTGCTGGTCGACCTGCGCTTGTGCTCTCCGTTCAAGCCTTTAATCAACTGGGAATGACGCTGGTGGCCCCCATTACg                                                                                                                                                                                                           <  1:54302/275‑1 (MQ=255)                                  cacCCATCTCCAGGCGCTACTCGCTTGATGAACTGCTGGCACAGTGTGACATGAACGCCGCGGAACTTAGCGAGCAGGATGTCTGGGGTAAATCCACCCCTGCGGGTGACGAAATATGGTAAAGAAAAGTGAATTTGAACGGGGAGACATTGTGCTGGTTGGCTTTGATCCAGCAAGCGGCCATGAACAGCAAGGTGCTGGTCGACCTGCGCTTGTGCTCTCCGTTCAAGCCATTCATCAACTGGGACACACGCTGGTGGCCCCCCttcagcca                                                                                                                                                                                                        >  2:489076/1‑268 (MQ=255)                                     ccATCTCCAGGCGCTACTCGCTTGATGAACTGCTGGCACAGTGTGACATGAACGCCGCGGAACTTAGCGAGCAGGATGTCTGGGGT‑AATCCACCCCTGCGGGTGACGAAATATGGTAAAGAAAAGTGAATTTGAACGGGGAGACATTGTGCTGGTTGGCTTTGATCCAGCAAGCGGCCATGAANAGCAAGGTGCTGGTCGACCTGCGCTTGTGCTCTCCGTTCAAGCCTTTAATCAACTGGGAATGACGCTGGTGGCACCCATTCAGCAGGGCgg                                                                                                                                                                                                   >  1:523872/1‑275 (MQ=255)                                              ggCGCTAATCGTGTNGGGAACTGGTGGCACAGTGTGACATGAACCACGCGGAACTTAGCGAGCAGGATGTCGGGGGTAAATCCACCCCTGCGGGTGACGAAATATGGTAAAGAAAAGTGAATTTGAACGGGGAGACATTGTGCTGGTTGGCTTTGATCCAGCAAGCGGCCATGAACAGCAAGGTGCTGGTCGACCTGCGCTTGTGCTCTCCGTTCAAGCCTTTAATCAACTGGGAATGACGCTGGTGGCCCCCATTACGCAGGGCGGAAATTTTg                                                                                                                                                                                           <  2:513923/275‑1 (MQ=255)                                                    aCTCGCGTGATGAACTGCTGGCACAGTGTGACATGAACGCCGCGCAACTTAGCGAGCAGGATGTCTGGGGTAAATCCACCCCTGCGGGTGACGAAATATGGTAAAGAAAAGTGAATTTGAACGGGGAGACATTGTGCTGGTTGGCTTTGATCCAGCAAGCGGCCATGAACAGCAAGGTGCTGGNCGACCTGCGCTTGTGCTCTCCGTTCAAGCCTTTAATCAACTGGGAATGACGGTGGTGGCCCCAATTACGCAGGGCGGAAAt                                                                                                                                                                                               >  1:513930/1‑265 (MQ=255)                                                          ttGATGAACTGCTGGCACAGTGTGACATGAACGCCGCGGAACTTAGCGAGCAGGATGTCTGGGGTAAATCCACCCCTGCGGGTGACGAAATATGGTAAAGAAAAGTGAATTTGAACGGGGAGACATTGTGCTGGTTGGCTTTGATCCAGCAAGCGGCCATGAACAGCAAGGTGCTGGTCGACCTGCGCTGGTGCGCTCCGTTCAAGCCTTTAATCAACTGGGAAGGACGCTGGGGGCCCCCCTTAAGCAGGGCGGAAATTTGGCCGGttcgggcg                                                                                                                                                                               >  2:279870/1‑269 (MQ=255)                                                                 aCTGCTGGTACAGTGTGACATGAACGCCGCGGAACTTAGCGAGCAGGATGTCTTGGGTAAATCCACCCCTGCGGGTGACGTAATATGGTAAAGAAAATTGAAGTTGCACGGGGAGACATTGTGCTGGTTGGCTTTGATCCAGCAAGCGGCCATGAACAGCAAGGTGCTGGTCGACCTGCGCTTGTGCTCTCCGTTCAAGCCTTTAATCAACTGGGAATGACGCTGGTGGCCCCCATTACGCAGGGCGGAAATTTTGCCCGTTATGCCGGATTTAg                                                                                                                                                                        <  1:118623/275‑1 (MQ=255)                                                                     ctgGCACAGTGTGACATGAACGCCGCGGAACTTAGCGAGCAGGATGTCTGGGGTAAATCCACCCCTGCGGGTGACGAAATATGGTAAAGAAAAGTGAATTTGAACGGGGAGACATTGTGCTGGTTGGCTTTGATCCAGCAAGCGGCCATGAACAGCAAGGTGCTGGTCGACCTTCGCTTGTGCTCTCCGTTCAAGCCTTTAATCAACTGGGAATGACGCTGGGGGCCGCCATTAGGCAGGGCGGAAATTTGGCCATTTATGCCGGAgtttacc                                                                                                                                                                      >  2:118622/1‑269 (MQ=255)                                                                         acagggttgaactGAACGCTGCGGAACTTAGCGAGCAGGATGTGTGGGGTAAATCCACCCCTGAGGGTGACGAAATATGGTAAAGCAAAGTGAATTTGAACGGGGAGACATTGTGCTGGTTGGCTTTGATCCAGCAAGCGGACATGAACAGCAAGGTGCTGGTCGACCTGCGCTTGTGCTCTCCGTTCAAGCCTTTAATCAACTGGGAATGACGCTGGTGGCCCCCATTACGCAGGGTGGAAATTTTGCCCGTTATGCCGGATTTAGCGTTCCt                                                                                                                                                                 <  1:176471/262‑1 (MQ=255)                                                                             gtgtGACATGAACGCTGCGGAACGTAGCGAGCAGGATGTCTGGGGTAAATCCACCCCTGCGGGTGACGAAATATGGTAAAGAAAAGTGAATTTGAACGGGGAGACATTGTGCTGGTTGGCTTTGATCCAGCAAGCGGCCATGAACAGCAAGGTGCTGGTCGACCTGCGCTTGTGCTCTCCGTTNAAGCCGTTAATCAACTGGGAATGACGCTGGTGGCCCCCATTACGCAGGGCGGAAATTTTGCCCGTTATGCCGGATTGAGCGTTCCTTTCCa                                                                                                                                                            >  1:493295/1‑275 (MQ=255)                                                                               gtgACATGAACGCCGCGGAACTTAGCGAGCAGGATGTCTGGGGTAAATCCACCCCTGCGGGTGACGAAATATGGTAAAGAAAAGTGAATTTGAACGGGGAGACATTGTGATGGTTGGATTTGATACAGCAAGCGGCCATGAACAGCAAGGTGCTGGTCGACCTGCGCTTGTGCTCGCCGTTCAAGCCTTTAATAAACTGGGAATGACGCTGGTGGCCCACATTACGCANTGCGGAAATTTTGCCAGTTTATCCTGATTTATTTTTCCttttcttt                                                                                                                                                          >  2:429016/1‑270 (MQ=255)                                                                                        aCGCCGCGGAACTTAGCGAGCAGGATGTCTGGGGTAAATCCACCCCTGCGGGGGACGAAATATGGTAAAGAAAAGTGAATTTGAACGGGGAGACATTGTGCTGGTTGGCTTTGATCCAGCAAGCGGCCATGAACAGCAAGGTGCTGGTCGACCTTCGCTTGTGCGCGCCGTTCAAGCCTTTAATCAACTGGGAATGACGCTGGTGGCTCCCATTACGCAGGTTGGAAATTTGGCCCGTTATGCCTGATGTAGCGTTCCTTGCCATTGCgaccgt                                                                                                                                                  >  2:176469/1‑270 (MQ=255)                                                                                             ggggAACTTAGTGATCAGGATGTATGTGTTAAATCTACCCCTGCGGGTGACGAAATATGGTAAAGAAAAGTGAATTTGAACGGGGAGACATTGTGCGGGTTGGCTTTGATCCAGCAAGCGGCCATTAACAGCAAGGTGCTGGTCGACCTGCGCTTGTGCTCTCCGTTCAAGCCTTTAAGCAACTGGGAATGACGCTGGTGGCCCCCATTACGCAGGGCGGAAATTTTGCCCGTTATGCCGGATTTCGCGTTCCTTTACATTGCGAAGAAGGCg                                                                                                                                              <  1:413496/271‑1 (MQ=255)                                                                                                  aCTTAGCGAGCAGGATGTCTGGGTTAAATCCACCCCTGCGGGTGACGAAATATGGTAAAGAAAAGTGAATTTGAACGGGGAGACATTGTGCNGGTTGGCTTTGATCCAGCAAGCGGCCATGAACAGCAAGGTGCTGGTCGACCTGCGCTTGTGCTCTCCGTTCAAGCCTTTAATCAACTGGGAATGACGCTGGTGGCCCCCATTACGCAGGGCGGAAATTTTGCCCGTTATGCCGGATTTAGCGTTTCTTTACTTTGCGTAGAAGGCGATGTGCa                                                                                                                                       <  1:489083/275‑1 (MQ=255)                                                                                                       gCGAGCAGGATGTCTGGGGTAAATCCACCCCTGCGGGTGACGAAATATGGTAAAGAAAAGTGGATTTGAACGGGGAGACATTGTGCTGGTTGGCTTTGATCCAGCAAGCGGCCATGAACAGCAAGGTGCTGGTCGACCTGCGCTTGTGCTCTCCGTTCAAGCCTTTAATCAACTGGGAATGACGCTGGTGGCCCCCATTACGCAGGGCGGAAATTTTGCCCGTTATGCCGGATTTAGCGTTCCTTTACATTGCGAAGAAGGCGATGTGCACGGCg                                                                                                                                  <  1:34089/275‑1 (MQ=255)                                                                                                                            aaTCCACCCCTGCGGGTGACGAAATATGGTAAAGAAAAGTGAATTTGAACGGGGAGACATTGTGCTGGTTGGCTTTGATCCAGCAAGCGGCCATGAACAGCAAGGTGCTGGTCGACCTGCGCTTGTGCTCTCCGTTCAAGCCTTTAATc                                                                                                                                                                                                                                           >  1:229948/1‑149 (MQ=255)                                                                                                                                cACCCCTGCGGGTGACGAAATATGGTAAAGAAAAGTGAATTTGAACGGGGAGACATTGTGCTGGTTGGCTTTGATCCAGCAAGCGGCCATGAACAGCAAGGTGCTGGTCGACCTGCGCTTGTGCTCTCCGTTCAAGCCTTTAATCAACt                                                                                                                                                                                                                                       <  2:229945/149‑1 (MQ=255)                                                                                                                                  ccccTGCTGGTTACGAAATATGGTAAAGAAAAGTGAATTTGAACGGGTAGACATTTTGCTGGTTGGCTTTGATCCAGCAAGCGGCCATGAACAGCAAGGTGCTGGTCGACCTGCGCTTTTGCTCTCCGTTCAAGCCTTTAATCAACTGGGAATGACGCTGGTGGCCCCCATTACGCAGGGCGGAAATTTTGCCCGTTATGCCGGATTTAGCGTTCCTTTACATTGCGAAGAAGGCGATGTGCACGGCGTGGTGCTGGTGAATCAGGTGCGgatga                                                                                                       <  1:429021/275‑1 (MQ=255)                                                                                                                                  ccccTGCGGGTGACGAAATATGGTAAAGAAAAGTGAATTTGAACGGGGAGACATTGTGCTGGTTGGCTTTGATCCAGCAAGCGGCCATGAACAGCAAGGTGCTGGTCGACCTGCGCTTGTGCTCTCCGTTCAAGCCTTTAATCAACTGGGAATGACGCtgt                                                                                                                                                                                                                         >  2:117105/1‑160 (MQ=255)                                                                                                                                  ccccTGCGGGTGACGAAATATGGTAAAGAAAAGTGAATTTGAACGGGGAGACATTGTGCTGGTTGGCTTTGATCCAGCAAGCGGCCATGAACAGCAAGGTGCTGGTCGACCTGCGCTTGTGCTCTCCGTTCAAGCCTTTAATCAACTGGGAATGACGCtgg                                                                                                                                                                                                                         >  1:464659/1‑161 (MQ=255)                                                                                                                                      tGCGGGTGACGAAATATGGTAAAGAAAAGTGAATTTGAACGGGGAGACATTGTGCTGGTTGGCTTTGATCCAGCAAGCGGCCATGAACAGCAAGGTGCTGGTCGACCTGCGCTTGTGCTCTCCGTTCAAGCCTTTAATCAACTGGGAATGACGCTGGTGGc                                                                                                                                                                                                                     <  2:464652/161‑1 (MQ=255)                                                                                                                                      tGCGGGTGACGAAATATGGTAAAGAAAAGTGAATTTGAACGGGGAGACATTGTGCTGGTTGGCTTTGATCCAGCAAGCGGCCATGAACAGCAAGGTGCTGGTCGACCTGCGCTTGTGCTCTCCGTTCAAGCCTTTAATCAACTGGGAATGACGCTGGTGGc                                                                                                                                                                                                                     <  1:117106/161‑1 (MQ=255)                                                                                                                                                                             ctgtgagtCATTGTGCTGGTTGGCTTTGATCCAGCAAGCGGCCATGAACAGCAAGTTGCTGGGCGACCTGCGCTTGTGCTCTCCGTTCAANCCTTTAATCAACTGGGAATCACGGTGGTGGCCCCCATTACGCAGAGCGGAAATTTTGCCCGTTATGCCGGATTTAGCGTTCCTTTACATTGCGAAGAAGGCGATGTGCACGGCGTGGTGCTGGTGAATCAGGTGCGGATGATGGATCTACACGCCCGGCTGGCAAAGCGTATTGGTCTGGCTg                                                             <  1:521575/270‑1 (MQ=255)                                                                                                                                                                                  aggcatttggCTGGTTGGCTTTGATCCAGCAAGCGGCCATGAACAGCAAGGTGCTGGTCTACCTGCGCTTGTGCTCTCCGTTCAAGCCTTTAATCAACTGGGAATGACGCTGGTGGCCCCCATTACGCAGGGCGGAAATTTTGCCCGTTATGCCGGATTTAGCGTTCCTTTACATTGCGAAGAAGGCGATGTGCACGGCGTGGTGCTGGTGAATCAGGTGCGGATGATGGATCTACACGCCCGGCTGGCAAAGCGTATTGGTCTGGCTGCGGAt                                                        <  1:279874/265‑1 (MQ=255)                                                                                                                                                                                    aCATTGTGCTGGTTGGCTTTGATCCAGCAAGCGGCCATGAACAGCAAGGTGCTGGTCGACCTGCGCTTGTGCTCTCCGTTCAAGCCTTTAATCAACTGGGAATGACGCtgg                                                                                                                                                                                                                         >  2:406433/1‑111 (MQ=255)                                                                                                                                                                                        tgtgCTGGTTGGCTTTGATCCAGCAAGCGGCCATGAACAGCAAGGTGCTGGTCGACCTGCGCTTGTGCTCTCCGTTCAAGCCTTTAATCAACTGGGAATGACGCTGGTGGc                                                                                                                                                                                                                     <  1:406437/111‑1 (MQ=255)                                                                                                                                                                                          tgCTGGTTGGCTTTGATCCAGCAAGCGGCCATGAACAGCAAGGTGCTGGTCGACCTGCGCTTGTGCTCTCCGTTCAAGCCTTTAATCAACTGGGAATGACGCTGGTGGCCCCCATTACGCAGGGCGGAAATTTTGCCCGTTATGCCGGATTTAGCGTTCCTTTACATTGCGACGAAGGCGATGTGCAAGGCgt                                                                                                                                 >  2:157779/1‑193 (MQ=255)                                                                                                                                                                                          cgcaggtcgaccagcaccttgctgttcatggccgcttgctggatcaaagccaaccagcacaatgtctccccgttcaaGCCTTTAATCAACTGGGa                                                                                                                                                                                                                                   >  2:541350‑M2/78‑95 (MQ=255)                                                                                                                                                                                            caggtcgaccagcaccttgctgttcatggccgcttgctggatcaaagccaaccagcacaatgtctccccgttcaaGCCTTTAATCAACTGGGAATGACGCTGGTGGCCCCCATTACGCAGGGCGGAAATTTTGCCCGTTATGCCGGGTTTAGCGTTCCTTTACATTGCGAAGAAGGCGATGTGCACGGCgtggtg                                                                                                                             >  1:597092‑M2/76‑195 (MQ=255)                                                                                                                                                                                              ggtcgaccagcaccttgctgttcatggccgcttgctggatcaaagccaaccagcacaatgtctccccgttcaaGCCTTTAATCAACTGGGAATGa                                                                                                                                                                                                                               <  1:541359‑M2/22‑1 (MQ=255)                                                                                                                                                                                              ggTTGGCTTTGATCCAGCAAGCGGCCATGAACAGCAAGGTGCTGGTCGACCTGCGCTTGTGCTCTCCGTTCAAGCCTTTAATCAACTGGGAATGACGCTGGTGGCCCCCATTACGCAGGGCGGAAATTTTGCCCGTTATGCCGGATTTAGCGTTCCTTTACATTGAGAAGAAGGCGATGTGCACGGCgtggtg                                                                                                                             <  1:157780/193‑1 (MQ=255)                                                                                                                                                                                                tcgaccagcaccttgctgttcatggccgcttgctggatcaaagccaaccagcacaatgtctccccgttcaaGCCTTTAATCAACTGGGAATGACGCTGGTGGCCCCCATTACGCAGGGCGGAAATTTTGCCCGTTATGCCGGATTTAGCGTTCCTTTACATTGCGAAGAAGGCGATGTGCACGGCGTGGTGCTgg                                                                                                                         <  2:597083‑M2/124‑1 (MQ=255)                                                                                                                                                                                                                      ccATGAACATCAAGGTGCTGGTTGACCTGCTCTTGTGCTCTCCGTTCAAGCCTTTATGCAACTGGGAATGACGCTGGTGGCCCCCATTACGCAGGGCGGAAATTTTGCCCGTTATGCCGGATTTAGCGTTCCTTTACATTGCGAAGAAGGCGATGTGCACGGCGTGGTGCTGGTTAATCATGTGCGGATGATGGATCTACACGCCCGGCTGGCAAAGCGTATTGGTCTGGCTGCGGATGAGGTGGTGTAAGAGGCGTTATTACGCTTGCAGGCgg                   <  1:388732/275‑1 (MQ=255)                                                                                                                                                                                                                                cAAGGTGCTGGTCGACCTGCGCTTGTGCTCTCCGTTCAAGCCTTTAATCAACTGGGAATGACGCTGGTGGCCCCCATTACGCAGGGCGGAAATTTTGCCCGTTATGCCGGATTTAGCGTTCCTTTACATTGCGAAGAAGGCGATGTGCACGGCgtgg                                                                                                                               >  2:256306/1‑157 (MQ=255)                                                                                                                                                                                                                                  aGGTGTGGGTCGACCTGTGCTTGTGGTATCCGTTCAAGCCTTTAATCAACTGTGTATGACGCTGGTGGCCCCAATTTAGCAGGGCGGAAANTTTGCCCGTTATGGCGGGTTTAGCGTTCCTTTACATTGCGAAGAAGGCGATGTGCACGGCGTGGTGCTGGTGAATCAGGTGCGGATGATGGATCTACACGCCCGGCTGGCAAAGCGTATTGGTCTGGCTGCGGATGAGGTGGTGGAAGAGGCGTGATTACGCTTGCAGCCGGTGGTGGAATaa        <  1:499051/274‑1 (MQ=255)                                                                                                                                                                                                                                   ggTGCTGGTCGACCTACGCTTTTAATCTGCGTTCAAGCCTTTAATCAACTGGGAATGACGCTGGTGGCCCCCATTACGCAGGGCGGAAATTTTGCCCGTTATGCCGGATTTAGCGTTCCTTTACATTGCGAAGAAGGCGATGTGCACGGCGTGGGGCTGGTGAATCAGGTGCgg                                                                                                           >  1:471464/1‑174 (MQ=255)                                                                                                                                                                                                                                    gTGCTGGTCGACCTGCGCTTGTGCTCTCCGTTCAAGCCTTTAATCAACTGGGAATGACGCTGGTGGCCCCCATTACGCAGGGCGGAAATTTTGCCCGTTATGCCGGATTTAGCGTTCCTTTACATTGCGAAGAAGGCGATGTGCACGGCGTGGTGCt                                                                                                                           <  1:256310/157‑1 (MQ=255)                                                                                                                                                                                                                                       cTGGTCTACCTGCGCTTGTGCTCTCCGTTCAAGCCTTTAATCAACTGGGAATGACGCTGGTGGCCCCCATTACGCAGGGCGGAAATTTTGCCCGTTATGCCGGATTTAGCGTTCCTTTACATTGCGAAGAAGGCGATGTGCACGGCGTGGTGCTGGTGAATCAGGTGCGgatga                                                                                                       <  2:471457/174‑1 (MQ=255)                                                                                                                                                                                                                                        tGGTCGACCTGCGCTTGTGCTCTCCGTTCAAGCCTTTAATCAAGTGGGAATGACGCTGGTGGCCCCCATTACGCAGGGCGGAAATTTTGCCCGTTATGCCGGATTTAGCGTTCCTTTACATTGCGAAGAAGGCGATGTGCACGGCGTGGTGCTGGTGAATCAGATGCGGGTGATGGATCTACANGCCCGGCTGGCAAAGCGGATTGGGCTGGCTGCGGATGCGGTGGTGGAAGCGGCGGTGTTAGGCTTGCAGGCGGTGGTGGaagtgtctctt  >  1:540009/1‑265 (MQ=255)                                                                                                                                                                                                                                          gTCGACCTGCGCTTGTGCTCTCCGTTCAAGCCTTTAATCAACTGGGAATGACGCTGGTGGCCCCCATTACGCAGGGCGGAAATTTTGCCCGTTATGCCGGATTTAGCGTTCCTTTACATTGc                                                                                                                                                        >  2:307670/1‑122 (MQ=255)                                                                                                                                                                                                                                              aCCTGCGCTTGTGCTCTCCGTTCAAGCCTTTAATCAACTGGGAATGACGCTGGTGGCCCCCATTACGCAGGGCGGAAATTTTGCCCGTTATGCCGGATTTAGCGTTCCTTTACATTGCgaag                                                                                                                                                    <  1:307674/122‑1 (MQ=255)                                                                                                                                                                                                                                                             ctcCGTTCAAGCCTTTAATCAACTGGGAATGACGCTGGTGGCCCCCATTACGCAGGGCGGAAATTTTGCCCGTTATGCCGGATTTAGCGTTc                                                                                                                                                                   >  2:326896/1‑92 (MQ=255)                                                                                                                                                                                                                                                                 gttcaaGCCTTTAATCAACTGGGAATGACGCTGGTGGCCCCCATTACGCAGGGCGGAAATTTTGCCCGTTATGCCGGATTTAGCGTTCCttt                                                                                                                                                               <  1:326900‑M2/86‑1 (MQ=255)                                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                   AGGCGCAAGTGAGCAACAATCAACTGATTCTGACACCCATCTCCAGGCGCTACTCGCTTGATGAACTGCTGGCACAGTGTGACATGAACGCCGCGGAACTTAGCGAGCAGGATGTCTGGGGTAAATCCACCCCTGCGGGTGACGAAATATGGTAAAGAAAAGTGAATTTGAACGGGGAGACATTGTGCTGGTTGGCTTTGATCCAGCAAGCGGCCATGAACAGCAAGGTGCTGGTCGACCTGCGCTTGTGCTCTCCGTTCAAGCCTTTAATCAACTGGGAATGACGCTGGTGGCCCCCATTACGCAGGGCGGAAATTTTGCCCGTTATGCCGGATTTAGCGTTCCTTTACATTGCGAAGAAGGCGATGTGCACGGCGTGGTGCTGGTGAATCAGGTGCGGATGATGGATCTACACGCCCGGCTGGCAAAGCGTATTGGTCTGGCTGCGGATGAGGTGGTGGAAGAGGCGTTATTACGCTTGCAGGCGGTGGTGGAATAAGGTGTG  >  CP009273/4438361‑4438865

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.