| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,639,713 | T→G | 100% | S19A (TCC→GCC) | gor → | glutathione oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,639,713 | 0 | T | G | 98.4% | 198.2 / ‑5.9 | 60 | S19A (TCC→GCC) | gor | glutathione oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base T (0/1); major base G (28/29); minor base C (2/0); total (30/30) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.92e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
CCGCTTCCGGCATGATTGTGATTAACCCGCCGTGGAAACTGGAACAACAGATGAATAACGTGCTGCCGTGGCTGCACAGCAAACTGGTTCCGGCAGGCACCGGGCACGCCACCGTAAGCTGGATCGTGCCGGAGTAATTGCA‑GCCATTGCTGGCACCTATTACGTCTCGCGCTACAATCGCGGTAATCAACGATAAGGACACTTTGTCATGACTAAACACTATGATTACATCGCCATCGGCGGCGGCAGCGGCGGTATCGCCTCCATCAACCGCGCGGCTATGTACGGCCAGAAATGTGCGCTGATTGAAGCCAAAGAGCTGGGCGGCACCTGCGTAAATGTTGGCTGTGTGCCGAAAAAAGTGATGTGGCACGCGGCGCAAATCCGTGAAGCGATCCATATGTACGGCCCGGATTATGGTTTTGATACCACTATCAATAAATTCAACTGGGAAACGTTGATCGCCAGCCGTACCGCCTATATCGACCGTATTCATACTTCCTATGAAAACGTGCTCGGT > CP009273/3639451‑3639970 | ccGCTGCCGGTATTTTTGTGATTACCCCGCCGTGGAAACTGGAACAACAGATGAATAACGTGCTGCCGTGGCTGCACAGCAAACTGGTTCCGGCAGGCACCGGGCACGCCACCGTAAGCTGGATCGTGCCGGAGTAATTGCA‑GCCATTGCTGGCACCTATTACGTCTCGCGCTACAATCGCGGTAATCAACGATAAGGACACTTTGTCATGACTAAACACTATGATTACATCGCCATCGGCGGCGGCAGCGGCGGTATCGCCGCCATCAACcgcg < 1:90917/275‑1 (MQ=255) gctgcaggaaTGATTGTGAGCAACCCGCCGTGGAAACTGGAACAACAGATGAATCACGTGCTGCCTTGGCTGCAAAGCAAACTGGTTCCGGCAGGCACCGGGCACGCCACCGTAAGCTGGATCGGGCCGGAGTAATTGCA‑GCCATTGCTGGCACCTATTACGTCTCGCGCTACAATAGCGGTAATCAACGATAAGGACACTTTGTCATGACTAAACACTATGATTACATCGCCATCGGCGGCGGCAGCGGCGGTATCGCCGCCATCAACcgcg < 2:284281/264‑1 (MQ=255) cccGCCGTGGAAACTGGAACAACAGATGAATAACGTGCTGCCGTGGCTGCACAGCAAACTGGTTCCGGCAGGCACCGGGCACGCCACCGTAAGCTGGATCGTGCCGGAGTAATTGCA‑GCCATTGCTGGCACCTATTACGTCTCGCGCTACAATCGCGGTAATCAACGATAAGGACACTTTGTCATGACTAAACACTATGATTACATCGCCATCGGCGGCGGCAGCGGCGGTATCGCCCGCATCCACCGCGCGGCCCTGTCCGGCCNCGAATgcgc > 2:313173/1‑275 (MQ=255) cgTGGAAACTGGAACAACAGATGAATAACGTGCTACCGTGGCTGCACAGCAAACTGGTTCCGGCAGGCACCGGGCACGCCACCGTAAGCTGGATCGTGCCGGAGTAATTGCA‑GCCATTGCTGGCACCTATTACGTCTCGCGCTACAATCGCGGTAATCAACGATAAGGACACTTTGTCATGACNAAACACTANGATTACATCGCCATCGGCGGCCGCAGCGGCTGTATCCCCCCCAACAACCGCGCGGCTATGTACGGCCCGAAACTTGCGCTg > 1:554187/1‑274 (MQ=255) aaGATGGATAAACTGCCGCCGTGGCTGCACAGCAAACTGGTTCCGGCAGGCACCGGGCACGCCACCCTAAGCTGGATCGTGCCGGAGTAATTGCA‑GCCATTGCTGGCACCTATTACGTCTCGCGCTACAATCGCGGTAATCAACGATAAGGACACTGTGTCATGACTAAACACTATGATTACATCGCCATCGGCGGCGGCAGCGGCGGTATCGCCGCCATCAACCGCGCGGCTATGTACGGCCAGAAATGTGCGCTGATTGAAGCCAAAGAGc < 2:382764/272‑1 (MQ=255) tGAATAACGTGCTGCCGTGGCTGCACAGCAAACTGGTTCCGGCAGGCACCGGGCACGCCACCGTAAGCTGGATCGTGCCGGAGTAATTGCA‑GCCATTGCTGGCACCTATTACGTCTCGCGCTACAATCGCGGTAATCAACGATAAGGACACTTTGTCATGACTAAACACTATGATTACATCGCCATCGGCGGCGGCAGCGGCGGTATCGCCGCCATCAACcgcg < 1:287112/224‑1 (MQ=255) gcgggcgtgacGTGGCTGCACAGCAAACTGGTTCCGGCAGTCACCGGGCCCGCCACCGTAAGCTGGATCGGGCCGGCGTAATTGCA‑GCCATTGCTGGCACCTATTACGTCTCGCGCTACAAGCGCGGTAATCAACGATAAGGACACTTTGTCATGACTAAACACTATGATTACATCGCCATCGGCGGCGGCAGCGGCGGTATCGCCGCCATCAACCGCGCGGCTATGTACGGCCAGAAATGTGCGCTGATTGAAGCCAAAGAGCTGGGCGGCAc < 2:115233/264‑1 (MQ=255) tgctgcCTTGGCTGCACAGCAAACTGGTTCCGGCAGGCACCGGGCACGCCACCGTAAGCTGGATCGTGCCGGAGTAATTGCA‑GCCATTGCTNGCACCTATTACGTCTCGCGTTACAATCGCGGTAATCAACGATAAGGACACTTTGTCATGACTAAACACTATGATTACATCGCCATCGGCGGCGGCAGCGGCGGTATCGCCGCCATCAACCGCGCGGCTATGTACGGCCAGAAATGTGCGCTGATTGAAGCCAAAGAGCTGGGCGGCACCTGCg < 1:657381/275‑1 (MQ=255) tgctgcCGTGGCTGCACAGCAAACTGGTTCCGGCAGGCACCGGGCACGCCACCGTAAGCTGGATCGTGCCGGAGTAATTGCA‑GCCATTGCTGGCCCCTATTACGTCTCGCGCTACAATCGCGGTAATCAACGATAAGGACACTTTGTCATGACTAAACACTATGATTACATCGCCATCGGCGGCGGCAGCGGCGGTATCGCCGCCATCAACCGCGCGGCTATGTACGGCCAGAAATGTGCGCTGATTGAAGCCAAAAAACTGGGCGGCACCTGc > 1:316184/1‑274 (MQ=255) ggCACGCCACCGTAAGCTGGATCGTGCCGGAGTAATTGCA‑GCCATTGCTGGCACCTATTACGTCTCGCGCTACAATCGCGGTAATCAACGATAAGGACACTTTGTCATGACTAAACACTATGATTACATCGCCATCGGCGGCGGCAGCGGCGGTATCGCAGCCATCAACCGCGCGGCTATGTACGGCCAGAAATGTGCGCTGATTGAAGCCAAAGAGCTGGGCGGCACCTCCGGAAATGTTTGCTGTGTGCCGAAAAAAGTGATGTGGCCCgcgg > 1:19069/1‑275 (MQ=255) cGCCACCGTAAGCTGGTTCGTGCCGGAGTAATTGCA‑GCCATTGCTGGCACCTATTACGTCTCGCGCTACAATCGCGGTAATCAACGATAAGGACACTTTGTCATGACTAAACACTATGATTACATCGCCATCGGCGGCGGCAGCGGCGGTATCGCAGCCATCAAc > 1:42177/1‑165 (MQ=255) gCCACCGTAAGCTGGATCGTGCCGGAGTAATTGCA‑GCCATTGCTGGCACCTATTACGTCTCGCGCTACAATCGCGGTAATCAACGATAAGGACACTTTGTCATGACTAAACACTATGATTACATCGCCATCGGCGGCGGCAGCGGCGGTATCGCCGCCATCAACcgcgc > 1:358868/1‑169 (MQ=255) ccGTAAGCTGGATCGTGCCGGAGTAATTGCA‑GCCATTGCTGGCACCTATTACGTCTCGCGCTACAATCGCGGTAATCAACGATAAGGACACTTTGTCATGACTAAACACTATGATTACATCGCCATCGGCGGCGGCAGCGGCGGTATCGCCGCCATCAACCGCGCGGCt < 2:358865/169‑1 (MQ=255) ggggAGCGTGCCGGGGTAA‑TGCACGCCATTGATGGAAACTATTACGTCTCGCGTTCAGAAGGCGGTAATGAACGAAAAGGAAACGTGGTCATGACTAAACAGTAGTATTACATGGCCATCGGCGGCGGCAGCGGCGGTATCGCCGCCAGCAACCGCGCGGCTATGTACGGCCAGAAATGGGCGCTGATTGAAGCCAAAGAGCTGGGCGGCACCTGCGTAAATGTTGGCTGTGTGCCGAAAAAAGTGATGTGGCACGCGGCGCAAATCCGTGAAg < 2:766284/272‑1 (MQ=255) ggttCGTGCCGGATTAATTGCA‑GCCATTGCTGGAACCTATTACGTCTCGCGCTACAATCGCGGGAATCAACGATAAGGACACTTTGTCATGACTAAACACTATGATTACATCGCCATCGGCGGCGGCAGCGGCGGTATCGCCGCCATCAACCGCGCGGCTATGTACGGCCAGAAATGTGCGCTGATTGAAGCCAAAGAGCTGGGCGGCACCTGCGTAAATGTTGGCTGTGTGCCGAAAAAAGTGATGTGGCACGCGGCGCAAATCCGTGAAGCGa < 1:161532/272‑1 (MQ=255) tGCCGGAGTAATTGCA‑GCCATTGCTGGCACCTATTACGTCTCGCGCTACAATCGCGGTAATCAACGATAAGGACACTTTGTCATGACTAAACACTATGATTACATCGCCATCGGCGGCGGCAGCGGCGGTATCGCCGCCATCa > 2:321255/1‑143 (MQ=255) ggAGTAATTGCA‑GCCATTGCTGGCACCTATTACGTCTCGCGCTACAATCGCGGTAATCAACGATAAGGACACTTTGTCATGACTAAACACTATGATTACATCGCCATCGGCGGCGGCAGCGGCGGTATCGCCGCCATCAACcg < 1:321258/143‑1 (MQ=255) gCCATTTCTGGCACCTATTACGTCTCGCGCTACAATCGCGGTAATCAACGATAAGGACACTTTGTCATGACTAAACACTATGATTACATCGCCATCGGCGGCTGCAGCGGCGGTATCGCCGCCATCAACCGCGCGGCTATGTACGGCCAGAAATGTGCGCTGATTGAAGCCAACGAGCTGGGCTGCACCTGCGTAAATGTTGGCTTTGTGCCGAAAAAAGTGATGAGGCACGCGGCGCAAATCCATACAGCGCTGCATATGCTAGGCACGGAt > 2:375467/1‑273 (MQ=255) tATTACGTCTCGCGCTACAATCGCGGTAATCAACGATAAGGACACTTTGTCATGACTAAACACTATGATTACATCGCCATCGGCGGCGGCAGCGGCGGTATCGCCGCCa > 1:769904/1‑109 (MQ=255) aCGTCTCGCGCTACAATCGCGGTAATCAACGATAAGGACACTTTGTCATGACTAAACACTATGATTACATCGCCATCGGCGGCGGCAGCGGCGGTATCGCCGCCATCaa < 2:769898/109‑1 (MQ=255) cgcTACAATCGCGGTAATCAACGATAATGACACTTTGTCATGACTAAACACTATGATTACATCGCCATCGGCGGCGGCAGCGGCGGTATCGCCGCCATCa > 1:478059/1‑100 (MQ=255) cgcTACAATCGCGGTAATCAACGATAAGGACACTTTGTCATGACTAAACACTATGATTACATCGCCATCGGCGGCGGCAGCGGCGGTATCGCCGCCATCAACCGCGCGGCTATGTACGGCCAGAAATGTGCGCTGATTGAAGCCAAAGAGCTGGGCGGCACCTGCGTAAATGTTGGCTGTGTGCCGaaaaa > 1:180893/1‑191 (MQ=255) aCAATCGCGGTAATCAACGATAAGGACACTTTGTCATGACTAAACACTATGATTACATCGCCATCGGCGGCGGCAGCGGCGGTATCGCCGCCATCAACcg < 2:478056/100‑1 (MQ=255) aCAATCGCGGTAATCAACGATAAGGACACTTTGTCATGACTAAACACTATGATTACATCGCCATCGGCGGCGGCAGCGGCGGTATCGCCGCCATCAACCGCGCGGCTATGTACGGCCAGAAATGTGCGCTGATTGAAGCCAAAGAGCTGGGCGGCACCTGCGTAAATGTTGGCTGTGTGCCGAAAAAAGTg < 2:180892/191‑1 (MQ=255) cgGTAATCAACGATAAGGACACTTTGTCATGACTAAACACTATGATTACATCGCCATCGGCGGCGGCAGCGGCGGTATCGCCGCCATCAACCGCGCGGCTATGTACGGCCAGAAATGTGCGCTGATTGAAGc > 1:407661/1‑132 (MQ=255) gTAATCAACGATAAGGACACTTTGTCATGACTAAACACTATGATTACATCGCCATCGGCGGCGGCAGCGGCGGTATCGCCGCCATCAACCGCGCGGCTATGTa > 2:351550/1‑103 (MQ=255) gTAATCAACGATAAGGACACTTTGTCATGACTAAACACTATGATTACATCGCCATCGGCGGCGGCAGCGGCGGTATCGCCGCCATCAACCGCGCGGCTATGTACGGCCAGAAATGTGCGCTGATTGAAGCCAAAGCGCTGGGCGGCACCTGCGTGAATNtt > 1:740756/1‑161 (MQ=255) gTAATCAACGATAAGGACACTTTGTCATGACTAAACACTATGATTACATCGCCATCGGCGGCGGCAGCGGCGGTATCGCCGCCATCAACCGCGCGGCTATGTACGGCCAGAAATGTGCGCTGATTGAAGCCAAAGAGCTGGGCGGCACCTGCGTAAATGTTGGCTGTGTGCCGAAAAAAGTGATGTGGCACgcgg > 1:676464/1‑195 (MQ=255) aaTCAACGATAAGGACACTTTGTCATGACTAAACACTATGATTACATCGCCATCGGCGGCGGCAGCGGCGGTATCGCCGCCATCAACCGCGCGGCTATGTACGGCCAGAAATGTGCGCTGATTGAAGCCaaa < 2:407658/132‑1 (MQ=255) tCAACGATACGGACACTTTGTCATGACTAACCCCTATGATTACATCGCCATCGGCGGCGGCAGCGGCGGTATCGCCGCCATCCACCGCGCGGCTGTGTACGGCCAGAAATGTGCGCTGATTGAAGCCAAAGAGCTGGGCGGCACCTGCGTAAATGTTGGCt < 2:740750/161‑1 (MQ=255) tCAACGATAAGGACACTTTGTCATGACTAAACACTATGATTACATCGCCATCGGCGGCGGCAGCGGCGGTATCGCCGCCATCAACCGCGCGGCTATGTACGGc < 1:351553/103‑1 (MQ=255) gATAAGGACACTTTGTCATGACTAAACACTATGATTACATCGCCATCGGCGGCGGCAGCGGCGGTATCGCCGCCATCAACCGCGCGGCt > 2:537442/1‑89 (MQ=255) aGGACACTTTGTCATGACTAAACACTATGATTACATCGCCATCGGCGGCGGCAGCGGCGGTATCGCCGCCATCAACCGCGCGGCTATGt < 1:537445/89‑1 (MQ=255) aGGACACTTTGTCATGACTAAACACTATGATTACATCGCCATCGGCGGCGGCAGCGGCGGTATCGCCGCCATCAACCGCGCGGCTATGTACGGCCAGAAATGTGCGCTGATTGAAGCCAAAGAGCTGGGCGGCACCTGCGTAAATGCTGGCTGTGTGCNGACAAAAGTGATGTGGCACgcgg > 1:738682/1‑182 (MQ=255) acacTTTGTCATGACTAAACCCTATGATTACATCGCCATCGGCGGCGGCAGCGGCGGTATCGCCGCCATCAACCGCGCGGCTATGTACGGCCAGAAATGTGCGCTGATTGAAGCCAAAGAGCTGGGCGGCACCTGCGTAAATGTTGGCTGTGTGCCGAAAAAAGTGATGTGGCACGCGGCGCAAATCCGTGAAGCGATCCATATGTACGGCCCGGATTATGGTTTTGATACCACTATCAATAAATTCAACTGGGAAACGTTGATCGCCAGCCGt < 1:313176/274‑1 (MQ=255) tacTTTGTCATGACTAAACACTATGATTACATCGCCATCGGCGGCGGCAGCGGCGTTATCGCCGCCATCAACCGCGCGGCTATGTACGGCCAGAAATGTGCGCTGATTGAAGCCAAAGAGCTGGGCGGCACCTGCGTAAATGTTGGCTGTGTGCCGAAAAAAGTGATGTGGCACGCGGCGCAAATCCGTGAAGCGa < 1:782216/195‑1 (MQ=255) acTTTGTCATGACTAAACACTATGATTACATCGCCATCGGCGGCGGCAGCGGCGGTATCGCCGCCATCAACCGCGCGGCTATGTACGGCCAGAAATGTGCGCTGATTGAAGCCAAAGAGCTGGGCGGCACCTGCGTAAATGTTGGCTGTGTGCCGAAAAAAGTGATGTGGCACGCGGCGCAAATCCGTGAAGCGATCCATATGTACGGACCGGAATATGGTTTTGATACCACGAGCAATAAATTCAAATGGGAAACGTTGATCGCAAGCCGTAcc > 2:303793/1‑275 (MQ=255) cATGACTAAACACTATGATTACATCGCCATCGGCGGCGGCAGCGGCGGTATCGCCGCCATCAACCGCGCGGCTATGTACGGCCAGAAATGTGCGCTGATTGAAGCCAAAGAGCTGGGCGGCACCTGCGTAAATGTTGGCTGTGTGCCGAAAAAAGTGATGTGGCACGCGGCGCAAATCCGTGAAGCGATCCATATTTACGGCCCGGATTATGGTTTTGATACCACTATCAATAAATTCAACTGGGAAACGTTGATCGCCACACGTACCGCCtaaa > 1:465469/1‑273 (MQ=255) cTAAACACTATGATTACATCGCCATCGGCGGCGGCAGCGGCGGTATCGCCGCCATCAACCGCGCGGCTATGTACGGCCAGAAATGTGCGCTGATAGAAGCCaaa > 1:420631/1‑104 (MQ=255) acacTATGATTACATCGCCATCGGCGGCGGCAGCGGCGGTATCGCCGCCATCAACCGCGCGGCTATGTACGGCCAGAAATGTgcgc > 2:24301/1‑86 (MQ=255) acacTATGATTACATCGCCATCGGCGGCGGCAGCGGCGGTATCGCCGCCATCAACCGCGCGGCTATGTACGGCCAGAAATGTGCGCTGATTGAAGCCAAAGAGCTGGGCGGCACCTGCGTAAATGtt > 2:567334/1‑127 (MQ=255) acacTATGATTACATCGCCATCGGCGGCGGCAGCGGCGGTATCGCCGCCATCAACCGCGCGGCTATGTACGGCCAGAAATGTGCGCTGATTGAAGCCAAAGAGCTGGGCGGCACCTGCGTAAATGTTGGCTGTGTGCCGAAAAAAGTGATGTGGCACGCGGCGCAAATCCGTGAAGCGATCCATATGTACGGCCCGGATTATGGTTTTGATACCACTATCAATAAATTCAACTGGGAAACGGTGATCGCCAGCCGTACGGCCTATATCGACCGTa > 1:27541/1‑275 (MQ=255) acacTATGATTACATCGCCATCGGCGGCGGCAGCGGCGGTATCGCCGCCATCAACCGCGCGGCTATGTACGGCCAGAAATGTGCGCTGATAGAAGCCAAAGAGc < 2:420628/104‑1 (MQ=255) tATGATTACATCGCCATCGGCGGCGGCAGCGGCGGTATCGCCGCCATCAACCGCGCGGCTATGTACGGCCAGAAATGTGCGCTGAt < 1:24301/86‑1 (MQ=255) tATGATTACATCGCCATCGGCGGCGGCAGCGGCGGTATCGCCGCCATCAACCGCGCGGCTATGTACGGCCAGAAATGTGCGCTGATTGAAGCCAAAGAGCTGGGCGGCAcc > 2:377812/1‑111 (MQ=255) tATGATTACATCGCCATCGGCGGCGGCAGCGGCGGTATCGCCGCCATCAACCGCGCGGCTATGTACGGCCAGAAATGTGCGCTGATTGAAGCCAAAGAGCTGGGCGGCACCTGCGTAAATGTTGGCt < 1:567337/127‑1 (MQ=255) aTGATTACATCGCCATCGGCGGCGGCAGCGGCGGTATCGCCGCCATCAACCGCGCGGCTATGTACGGCCAGAAATGTGCGCTGATTGAAGCCACATAGCTGGGCGGCACCTGCGTAAATTTTGGCTGTGTGCCGAACAAAGTGATGTGGCACGCGGCTCAAATCCGTGAAGCGATCCATATGTACGGCCCGGATTCTTGTTTTGATACCACTATCAATAAATTAAACTGGGAAACGTTGCTCGCCAGCCGTACCTCCGATATAGCCCGTCTTCa > 1:218839/1‑274 (MQ=255) tGATTACATCGCCATCGGCGGCGGCAGCGGCGGTATCGCCGCCATCAAc > 1:131482/1‑49 (MQ=255) tGATTACATCGCCATCGGCGGCGGCAGCGGCAGTATCGCCGCCATCAACCGCGCGGCTATGTACGGCCAGAAATGTGCGCTGATTGAAGCCAAAGAGCTGGGGGGCAGCTGCGTAAATGTTGGCTGTGTGCCGAAAAAAGTGATGTGGCACGCGGCGCAAATCCGTGAAGCGATCAATATGTACGGCCCGGACTATGGTTTTGATACCACTATAAATAAATTCAACTGGGAAACGGTGATCGCAAGCCGTACCGCCTATCTCGACCGTAtgctga > 2:203498/1‑270 (MQ=255) aTTACATCGCCATCGGCGGCGGCAGCGGCGGTATCGCCGCCATCAACCGCGCGGCTATGTACGGCCAGAAATGTGCGCTGATTGAAGCCAAAGAGCTGGGCGGCACCTGCg < 1:377815/111‑1 (MQ=255) tACATCGCCATCGGCGGCGGCAGCGGCGGTATCGCCGCCATCAACcgcg < 2:131481/49‑1 (MQ=255) cATCGCCATCGGCGGCGGCAGCGGCGGTATCGCCGCCATCAACCGCGCGGCTATGTACGGCCAGAAATGTGCGCTGATTGAAGCCAAAGAGCTGGGCGGCACCTGCGTAAATGTTGGCTGTGTGCCGAAAAAAGTGATGTgg > 1:172568/1‑142 (MQ=255) tCGCCATCGGCGGCGGCAGCGGCGGTATCGCCGCCATCAACCGCGCGGCTATGTACGGCCAGAAATGTGCGCTGATTGAAGCCAAAGAGCTGGGCGGCACCTGCGTAAATGTTGGCTGTGTGCCGAAAAAAGTGATGTGGCACGCGGCGCAAATCCGTGAAGCGATCCata > 1:227533/1‑171 (MQ=255) gCCATCGGCGGCGGCAGCGGCGGTATCGCCGCCATCAACCGCGCGGCTATGTACGGCCAGAAATGTGCGCTGATTGAAGCCAAAGAGCTGGGCGGCACCTGCGTAAATGTTGGCTGTGTGCCGAAAAAAGTGATGTGGCAcg < 2:172567/142‑1 (MQ=255) cATCGGCGGCGGCAGCGNCGGTATCGCCTACATCAACCGCGCGGCTATGTACGGCCAGAAATGTGCGCTGATTGAAGCCAAAGAGCTGGGCGGCACCTGCGTAAATGTTGGCTGTGTGCCGAAAAAAGTGATGTGGCACGCGGCGCAAATCCGTGAAGCGATCCATATGTACGGcc < 1:743106/176‑1 (MQ=255) cggctgcAGCGGCGGTATCGCCGCCATCAACCGCTCGGCTATGTACGGCCAGAAATGTGCGCTGATTGAAGCCAAAGAGCTGGGCGGCACCTGCGTAAATGTTGGCTGTGTGCCGAAAAAAGTGATGTGGCACGCGGCGCAAATCCGTGAAGCGATCCATATGTACGGCCCGGATTATGGTTTTGATACCACTATCAATAAATTCAACTGGGAAACGTTGATCGCCAGCCGTACCGCCTATATCGACCGTATTCATACTTCCTATGAAAACGTGc < 1:203501/275‑1 (MQ=255) cggcggcAGCGGCGGTATCGCCGCCATCAACCGCGCGGCTATGTACGGCCAGAAATGTGCGCTGATTGAAGCCAAAGAGCTGGGCGGCACCTGCGTAAATGTTGGCTGTGTGCCGAAAAAAGTGATGTGGCACGCGGCGCAAATCCGTGAAGCGATCCat < 1:632772/160‑1 (MQ=255) cggcAGCGGCGGTATCGCCGCCATCAACCGCGCGGCTATGTACGGCCAGAAATGTGCGCTGATTGAAGCCAAAGAGCTGGGCGGCACCTGCGTAAATGTTGGCTGTGTGCCGAAAAAAGTGATGTGGCACGCGGCGCAAATCCGTGa > 2:687118/1‑147 (MQ=255) gcAGCGTCGGTCTCGCCGCCATCAACCGCGCGGCTATGTACGGCCAGAAATGTGCGCTGATTGAAGCCAAAGAGCTGGGCGGCACCTGCGTAAATGTTGGCTGTGTGCCGAAAAAAGTGATGTGGCACGCGGCGCAAATCCGTGAAGCGATCCATATGTACGGCCCGGATTATGGTTTTGATACCACTATCAATAAATTCAACTGGGAAACGTTGATCGCCAGCCGTACCGCCTATATCGACCGTATTCATACTTCCTATGAAAACGTGCTCGGt < 1:303796/275‑1 (MQ=255) aGCGGCGGTATCGCCGCCATCAACCGCGCGGCTATGTACGGCCAGAAATGTGCGCTGATTGAAGCCAAAGAGCTGGGCGGCACCTGCGTAAATGTTGGCTGTGTGCCGAAAAAAGTGATGTGGCACGCGGCGCAAATCCGTGAAGCg < 1:687124/147‑1 (MQ=255) | CCGCTTCCGGCATGATTGTGATTAACCCGCCGTGGAAACTGGAACAACAGATGAATAACGTGCTGCCGTGGCTGCACAGCAAACTGGTTCCGGCAGGCACCGGGCACGCCACCGTAAGCTGGATCGTGCCGGAGTAATTGCA‑GCCATTGCTGGCACCTATTACGTCTCGCGCTACAATCGCGGTAATCAACGATAAGGACACTTTGTCATGACTAAACACTATGATTACATCGCCATCGGCGGCGGCAGCGGCGGTATCGCCTCCATCAACCGCGCGGCTATGTACGGCCAGAAATGTGCGCTGATTGAAGCCAAAGAGCTGGGCGGCACCTGCGTAAATGTTGGCTGTGTGCCGAAAAAAGTGATGTGGCACGCGGCGCAAATCCGTGAAGCGATCCATATGTACGGCCCGGATTATGGTTTTGATACCACTATCAATAAATTCAACTGGGAAACGTTGATCGCCAGCCGTACCGCCTATATCGACCGTATTCATACTTCCTATGAAAACGTGCTCGGT > CP009273/3639451‑3639970 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |