Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	CP009273	3792824	3792865	42	3 [2]	[2] 3	waaZ	lipopolysaccharide core biosynthesis protein

TGCACTGATGTCTTGAAGTTTAATAAATGGAATTACATCGTAAGAAATAGCTGTATC  >  CP009273/3792774‑3792830                                                  |        tGCACTGATGTCTTGAAGTTTAATAAATGGAATTACATCGTAAGAAATAg         <  2:49827/50‑1 (MQ=255)        aTGTCTTGAAGTTTAATAAATGGAATTACATCGTAAGAAATAGCTg      >  2:121489/1‑46 (MQ=255)            cTTGAAGTTTAATAAATGGAATTACATCGTAAGAAATAGCTGTatc  <  1:121490/46‑1 (MQ=255)                                                  |        TGCACTGATGTCTTGAAGTTTAATAAATGGAATTACATCGTAAGAAATAGCTGTATC  >  CP009273/3792774‑3792830

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑