New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	757572 =	10 (0.580)	6 (0.380)	5/276	NT	32.4%	coding (595/1218 nt)	sucB	dihydrolipoyltranssuccinase
	?	CP009273	757796 =	16 (1.020)					coding (819/1218 nt)	sucB	dihydrolipoyltranssuccinase

CGATGCGTTAAGCCCGGCGATCCGTCGCCTGCTGGCTGAACACAATCTCGACGCCAGCGCCATTAAAGGCACCGGTGTGGGTGGTCGTCTGACTCGTGAAGATGTGGAAAAACATCTGGCGAAAGCCCCGGCGAAAGAGTCTGCTCCGGCAGCGGCTGCTCCGGCGGCGCAACCGGCTCTGGCTGCACGTAGTGAAAAACGTGTCCCGATGACTCGCCTGCGTAAGCGTGTGGCAGAGCGTCTGCTGGAAGCGAAAAACTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACGCTTCTATCGACGGCGATGACGTGGTTTACCACAACT  >  CP009273/757310‑757773                                                                                                                                                                                                                                                                       |                                                                                                                                                                                                          accattcaccgccatcggacgatctttgatagcgtgcatacccagaattgcgctctgcggcgggttgatgatcggcgtagacatcagggaaccgaacacaccaccgttggtgatggtgaagttaccaccggtcagatcttcaacggtcagcttgccgtcacggcctttgattgccagctctttgattttcttctcgatgtctgccatgccgagggtatcgacatcacgcagaaccggcgtcaccaggccgcccggcgtagaaACCGCCATgctaa                                                                                                                                                                                               <  1:206160‑M1/13‑3 (MQ=255)      cGTTAAGCCCGGCGATCCGTCGCCTGCTGGCTGAACACAATCTCGACGCCAGCGCCATTAAAGGCACCGGTGTGGGTGGTCGTCTGACTCGTGAAGATGTGGAAAAACATCCGGCGAAAGCCCCGGCGAAAGAGTCTGCTCCGGCCGCGGCTGCTCCGGCGGCGCAACCGGCCCTGGCTGCACGTAGCGCAAAACGTGTCCCGATGACTCGCCGACGTAAGCGTGGGGNGGAGCGTCTGCTAGAAGCGCTAAACTCGACCCCCGGGCTCAcccc                                                                                                                                                                                           >  2:206154/1‑272 (MQ=255)                            ccggctggctgAACACAAGCCCGACGCCGGCGCCATTAAAGGCACCGGGGTGGGTGGTCGGCTGACTCGTGAAGATGTGGAAAAACATCTGGCGAAAGCCCCGGCGAAAGAGTCTGCTCCGGCAGCGGCTGCTCCGGCGGCGCAACCGGCTCTGGCTGCACGTAGTGAAAAACGTGTCCCGATGACTCGCCTGCGTAAGCGTGTGGCAGAGCGTCTGCTGGAAGCGAAAAACTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAg                                                                                                                                                                     <  2:72349/271‑1 (MQ=255)                                ctggctgAACACAATCTCGACGCCAGCGCCAATAAAGGCACCGGTGTGGGTGGTCGTCTGACTCGTGAAGATGTGGAAAAACATCTGGCGAAAGCCCCGGCGAAAGAGTCTGCTCCGGCAGCGGCTGCTCCGGCGGAGCAACCGGCTCTGGCTGCACGTAGAGAAAAACGTGTCCCGATGACTCGCCTGCGTAAGCGGGTGGCAGAGCGTCTGCTGGAAGCGAAAAACTCCAACGCCATGCTGAACACGTTCAACGAAGTCCACAGGAAGCCGAt                                                                                                                                                                >  1:332953/1‑275 (MQ=255)                                                                          ggcgtagacatcagggaaccgaacacaccaccgttggtgatggtgaagttaccaccggtcagatcttcaacggtcagcttgccgtcacggcctttgactgccagctctttgattttcttctcgatgtctgccatgccgatggtatcgacatcncgcagaaccggcgtcaccaggccgcgcggcgtagaaACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACg                                                                                                                      <  1:283628‑M1/86‑1 (MQ=255)                                                                          ggTGTGGGTGGTCGTCTGACTCGTGAAGATGTGGAAAAACATCTGGCGAAAGCCCCGGCGAAAGAGTCTGCTCCGGCAGCGGCTGCTCCGGCGGCGCAACCGGCTCTGGCTGCACGTAGTGAAAAACGTGTCCCGATGACTCGCCTGCGTAAGCGTGTGGCAGAGCGTCTGCTGGAAGCGAAAAACTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGc                                                                                                                                                     <  1:37936/244‑1 (MQ=255)                                                                          ggTGTGGGTGGTCGTCTGACTCGTGAAGATGTGGAAAAACATCTGGCGAAAGCCCCGGCGAAAGAGTCTGCTCCGGCAGCGGCTGCTCCGGCGGCGCAACCGGCTCTGGCTGCACGTAGTGAAAAACGTGTCCCGATGACTCGCCTGCGTAAGCGTGTGGCAGAGCGTCTGCTGGAAGCGAAAAACTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGc                                                                                                                                                     >  2:37936/1‑244 (MQ=255)                                                                                         cTGACTCGTGAAGATGTGGAAAAACATCTGGCGAAAGCCCCGGCGAAAGAGTCTGCTCCGGCAGCGGCTGCTCCGGCGGCGCAACCGGCTCTGGCTGCACGTAGTGAAAAACGTGTCCCGATGACTCGCCTGCGTAAGCGTGTGGCAGAGCGTCTGCTGGAAGCGAAAAACTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAg                                                                                                                                                                     <  1:143354/213‑1 (MQ=255)                                                                                                                      ggCGCAAGCCCCGGCGAAAGAGTCTGCTTCGGCAGTGTCTGCTCCGGCGGCGCAAACGGCTCTGGCTGAACGTAGTGAAAAACGTGTCCCGATGTCTCGCCTGCGTAAGCGTGGTGCAGAGCGTCTGCTGGAAACGAAAAACTCCACCGCCATGCTTACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCg                                                                           <  1:11733/274‑1 (MQ=255)                                                                                                                                 cggtcagatcttcaacgggcagcttgccgtcacggcctttgactnccagctctttgattttctcgtcgatgtctgccatgccgagggtatcgacatcacgcagaaccggcgtcaccaggccgcgcggcgtagaaACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCa                                                                                                              >  1:256840‑M1/135‑228 (MQ=255)                                                                                                                                                cTCCGGCATCGGCTGCTCCGGCGGCGCAACCGGCTCTGGCTGCACGTAGTGAAAAACGTGTCCCGATGACTCGCCTGCGTAAGCGTGTGGCAGAGCGTCTGCTGGAAGCGAAAAACTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACGTGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGAATCCGTCTGGGCTTTATGTCCTTCTAAGTAAAAGCGTGGGTTGAAGCCCTGAAACGTTaaca                                                 >  1:295618/1‑271 (MQ=255)                                                                                                                                                                              ccagctctttgattttcttctcgatgtctgccatgccgagggtatcgacatcacgcagaaccggcgtcaccaggccgcgcggcgtagaaACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGAGCTGCGTAAGCAGNACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACGCTTCTATCGACGGCGATGAc                  <  1:288475‑M1/186‑1 (MQ=255)                                                                                                                                                                                            tttttcgagatgtctgccaggccgagggtcacgccctcacgcagaaccggcgtcaccaggcagcgcggcgtaaaaACAGCCAGGCTGACCACGTTCAACGAAGGCAACATGAAGCCGATTAGGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACGCTTCTATCGACGGCGATGACGTGGTTTACCACaa    >  2:283617‑M1/76‑275 (MQ=255)                                                                                                                                                                                             tcttctcgatgtctgccattccgggggtatcgacatcacgccgaaccggcgtcaccaggccgcgcggcgtagaaACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCAGCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACGCTTCTATCGACGGCGATGACGTGGTTTACCACaa    >  1:2738‑M1/75‑274 (MQ=255)                                                                                                                                                                                              gttaccgaggtccgccaggccgggggtagcgacatcacgcagaaccggcgtcaccaggcggcgcggcgaagaaACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACGCTTCTAGCGACGGCGATGACGTGGTTTACCACAACt  >  2:288464‑M1/74‑275 (MQ=255)                                                                                                                                                                                                                          tcgacatgacgcagaaccggcgtcaccaggccgcgcggcggagaaAACGCCATGCTg                                                                                                                                                                                                <  2:179931‑M1/12‑1 (MQ=255)                                                                                                                                                                                                                                                 tCTGCTGGAAGCGAAAAACTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCt                                                                                      >  1:173437/1‑140 (MQ=255)                                                                                                                                                                                                                                                     ctgGAAGCGAAAAACTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGt                                                                                  <  2:173433/140‑1 (MQ=255)                                                                                                                                                                                                                                                                       |                                                                                                                                                                                                          CGATGCGTTAAGCCCGGCGATCCGTCGCCTGCTGGCTGAACACAATCTCGACGCCAGCGCCATTAAAGGCACCGGTGTGGGTGGTCGTCTGACTCGTGAAGATGTGGAAAAACATCTGGCGAAAGCCCCGGCGAAAGAGTCTGCTCCGGCAGCGGCTGCTCCGGCGGCGCAACCGGCTCTGGCTGCACGTAGTGAAAAACGTGTCCCGATGACTCGCCTGCGTAAGCGTGTGGCAGAGCGTCTGCTGGAAGCGAAAAACTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACGCTTCTATCGACGGCGATGACGTGGTTTACCACAACT  >  CP009273/757310‑757773

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.