New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 1940795	19 (1.100)	4 (0.240)	4/288	NT	22.9%	coding (288/603 nt)	yebB	DUF830 family protein
	?	CP009273	= 1940857	9 (0.550)					coding (350/603 nt)	yebB	DUF830 family protein

TCAAATATCAGCTGCATCAAATTGCTGGAGTAATCACGTCGGGATCATTATCGGTCATAACGGTGAAGACTTCCTGGTTGCAGAAAGCCGGGTTCCCCTTTCAACCATCACCACGCTATCTCGTTTTATTAAACGTTCGTCTAATCAACGCTATGCTATAAAGCGATTAGACGCTGGGCTGACAGAACGACAAAAACAACGAATTGTTGAACAGGTTCCCTCCCGGCTACGCAAACTTTACCACACCGGTTTTAAATACGAATCTTCGCGCCAGTTCTGTTCAAAATTTGTTTTTGATATTTATAAAGAAGCGCTATGTATTCCGGTGGGTGAAATAGAGACGTTTGGAGAATTGTTAAATAGCAATCCGAATGCAAAACTCACTTTCTGGAAATTCTGGTTCCTGGGTTCTATTCCGTGGGAGCGTAAAACCGTCACGCCAGCCAGTTTGTGGCATCATCCGGGTTTGGTGTTGATTCATG  >  CP009273/1940582‑1941063                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                                             tCAAATATCAGCTGCATCAAATTGCTGGAGTAATCACGTCGGGATCATTATCGGTCATAACGGTGAAGACTTCCTGGTTGCAGAAAGCCGGGTTCCCCTTTCAACCATCACCACGCTATCTCGTTTTATTAAACGTTCGTCTAATCAACGCTATGCTATAAAGCGATTAGACGCTGGGCTGACAGAACGACAAAAACAACGAATTGTTGAACAGGTTACCTACCGGCTACGCAAAGTTAACCACACCGGTTTTAAATACGAATCTTCGCGCAAgc                                                                                                                                                                                                                 >  2:88273/1‑274 (MQ=255)         cAGCTGCTTCAAATTTCTTGAGTAATTACGTCGGGATCATTATCGGTCATAACGGTGAAGACTTCCTGGTTGCAGAAAGCCGGGTTCCCCTTTCAACCATCACCACGCTATCTCGTTTTATTAAACGTTCGTCTAATCAACGCTATGCTATAAAGCGATTAGACGCTGGGCTGACAGAACGACAAAAACAACGAATTGTTGAACAGGTTCCCTCCCGGCTACGCAAACTTTACCACACCGGTTTTAAATACGAATCTTCGCGCCAGTTctgttca                                                                                                                                                                                                         >  1:88275‑M2/1‑268 (MQ=255)                                                                                           ggTTCCCCTTTCAACCATCACCACGCTATCTCGTTTTATTAAACGTTCGTCTAATCAACGCTATGCTATAAAGCGATTAGACGCTGGGCTGACAGAACGACAAAAACAACGAATTGTTGAACAGGTTCCCTCCCGGCTACg                                                                                                                                                                                                                                                             >  1:209558/1‑141 (MQ=255)                                                                                               ccccTTTCAACCATCACCACGCTATCTCGTTTTATTAAACGTTCGTCTAATCAACGCTATGCTATAAAGCGATTAGACGCTGGGCTGACAGAACGACAAAAACAACGAATTGTTGAACAGGTTCCCTCCCGGCTACGCaaa                                                                                                                                                                                                                                                         <  2:209552/141‑1 (MQ=255)                                                                                                      cAACCATCACCACGCTATCTCGTTTTATTAAACGTTCGTCTAATCAACGCTATGCTATAAAGCGATTAGACGCTGGGCTGACAGAACGACAAAAACAACGAATTGTTGAACAGaactggcgcgaagattcgtatttaaaaccggtgtggtaaagtttgcgt                                                                                                                                                                                                                              >  1:318687‑M1/1‑113 (MQ=255)                                                                                                          cATCACCACGCTATCTCGTTTTATTAAACGTTCGTCTAATCAACGCTATGCTATAAAGCGATTAGACGCTGGGCTGACAGAACGACAAAAACAACGAATTGTTGAACAGaactggcgcgaagattcgtatttaaaaccggtgtggtaaagtttgcgtagcc                                                                                                                                                                                                                          <  2:318676‑M1/161‑53 (MQ=255)                                                                                                                                                aTCAACGCTATGCTATAAAGCGATTAGACGCTGGGCTGACAGAACGACAAAAACAACGAATTGTTGAACAGGTTCCCTCCCGGCTACGCAAACTTTACCACACCGGTTTTAAATACGAATCTTCGCGCCAGTTCTGTTCAAAATTTATTTTTCATATTTATAAAGAAGCGCTATGTATTCCGGTGGGTGAAATAGAGACGTTTGGAGAATTGTTAAATAGCAATCCGAATGCAAAACTCACTTTCTGGAAATTCTGGTTCCTTGGTTCTAtt                                                                     >  1:294872/1‑272 (MQ=255)                                                                                                                                                 tcaaagaaatggtatAAAGAGGTTGGAAGCTGGGCTGACAGAACGACAAAAACAACGAATTGTTTAACAGGTTCCCTCCCGGCTACGCAAACTTTACCACACCGGTTTTAAATACGAATCTTCGCGCCAGTTCTGTTCAAAATTTGTTTTTGATATTTATAAAGAAGCGCTATGTATTCCGGTGGGTGAAATAGAGACGTTTGGAGAATTGTTAAATAGCAATCCGAATGCAAAACTCACTTTCTGGAAATTCTGGTTCCTGGGTTCTATTCCGt                                                                 <  2:294861/267‑1 (MQ=255)                                                                                                                                                     cGCTATGCTATAAAGCGATTAGACGCTGGGCTGACAGAACGACAAAAACAACGAATTGTTGAACAGGTTCCCTCCCGGCTACGCAAACTTTACCACACCGGTTTTAAATACGaa                                                                                                                                                                                                                              >  1:279596/1‑114 (MQ=255)                                                                                                                                                         atgctatAAAGCGATTAGACGCTGGGCTGACAGAACGACAAAAACAACGAATTGTTGAACAGGTTCCCTCCCGGCTACGCAAACTTTACCACACCGGTTTTAAATACGAATCtt                                                                                                                                                                                                                          <  2:279585/114‑1 (MQ=255)                                                                                                                                                          tgctatAAAGCGATTAGACGCTGGGCTGACAGAACGACAAAAACAACGAATTGTTGAACAGGTTCCCTCCCGGCTACGCAAACTTTACCACACCGGTTTTAAATACGAATCTTc                                                                                                                                                                                                                         >  1:220417/1‑114 (MQ=255)                                                                                                                                                              ataAAGCGATTAGACGCTGGGCTGACAGAACGACAAAAACAACGAATTGTTGAACAGGTTCCCTCCCGGCTACGCAAACTTTACCACACCGGTTTTAAATACGAATCTTCgcgc                                                                                                                                                                                                                     <  2:220411/114‑1 (MQ=255)                                                                                                                                                                      aTTAGACGCTGGGCTGACAGAACGACAAAAACAACGAATTGTTGAACAGGTtccctc                                                                                                                                                                                                                                                                      >  2:135172/1‑57 (MQ=255)                                                                                                                                                                      aTTAGACGCTGGGCTGACAGAACGACAAAAACAACGAATTGTTGAACAGGTTCCCTCCCGGCTACGCAAACTTTACCACACGGGGCTTAAATACGAATCTTCGCGCCAGTTCTGTTCACAATTTGTTTTTGATATTTATAAAGAAGCGCTATGTATTCCGGTGGGTGAAATAGAGACGTTTGGAGAATTGTTAAATAGCAATCCGAATGCAAAACTCACTTTCTGGAAATTCTGTTTCCTGGGTTCTATTCCGTTGGAGCGTAAAACCGTCACg                                             >  1:29121/1‑274 (MQ=255)                                                                                                                                                                      aTTAGACGCTGGGCTGACAGAACGACAAAAACAACGAATTGTTGAACAGGTTCCCTCCCGGCTACGCAAACTTTACCACACCGGTTTTAAATACGAATCTTCGCGCCAGTTCTGTTCaaaa                                                                                                                                                                                                      >  1:77166/1‑121 (MQ=255)                                                                                                                                                                      aTTAGACGCTGGGCTGACAGAACGACAAAAACAACGAATTGTTGAACAGGTTCCCTCCCGGCTACGCAAACTTTACCACACCGGTTTTAAATACGAATCTTCGCGCCAGTTCTGTTCAAAATTTGTTTTTGATATTTATAAAGAAGCGCTATGTATTCCGGTGGGTGAAATAGAGACGTTTGGAGAATTGTTAAATAGCAATCCGAATGCAAAACTCACTTTCTGGAAATTCTGGt                                                                                   >  1:275468/1‑236 (MQ=255)                                                                                                                                                                          gACGCTGGGCTGACAGAACGACAAAAACAACGAATTGTTGAACAGGTTCCCTCCCgg                                                                                                                                                                                                                                                                  <  1:135174/57‑1 (MQ=255)                                                                                                                                                                          gACGCTGGGCTGACAGAACGACAAAAACAACGAATTGTTGAACAGGTTCCCTCCCGGCTACGCAAACTTTACCACACCGGTTTTAAATACGAATCTTCGCGCCAGTTCTGTTCAAAATTTg                                                                                                                                                                                                  <  2:77164/121‑1 (MQ=255)                                                                                                                                                                          gACGCTGGGCTGACAGAACGACAAAAACAACGAATTGTTGAACAGGTTCCCTCCCGGCTACGCAAACTTTACCACACCGGTTTTAAATACGAATCTTCGCGCCAGTTCTGTTCAAAATTTGTTTTTGATATTTATAAAGAAGCGCTATGTATTCCGGTGGGTGAAATAGAGACGTTTGGAGAATTGTTAAATAGCAATCCGAATGCAAAACTCACTTTCTGGAAATTCTGGTTCCt                                                                               <  2:275457/236‑1 (MQ=255)                                                                                                                                                                              cTGGGCTGACAGAACGACAAAAACAACGAATTGTTGAACAGaactggcgcgaag                                                                                                                                                                                                                                                                 >  2:17987‑M1/1‑41 (MQ=255)                                                                                                                                                                                  gCTGACAGAACGACAAAAACAACGAATTGTTGAACAGaactggcgcgaagattc                                                                                                                                                                                                                                                             <  1:17987‑M1/54‑18 (MQ=255)                                                                                                                                                                                           aCGACAAAAACAACGAATTGTTGAACAGGTTCCCTCCCGGCTACGCAAACTTTACCACACCGGTTTTAAATACGAATCTTCGCGcc                                                                                                                                                                                                                    >  1:230893/1‑86 (MQ=255)                                                                                                                                                                                               cAAAAACAACGAATTGTTGAACAGGTTCCCTCCCGGCTACGCAAACTTTACCACACCGGTTTTAAATACGAATCTTCGCGCCAGtt                                                                                                                                                                                                                <  2:230886/86‑1 (MQ=255)                                                                                                                                                                                                              gttgAACAGGTTCCCTCCCGGCTACGCAAACTTTAcc                                                                                                                                                                                                                                                  >  2:258190/1‑37 (MQ=255)                                                                                                                                                                                                                tgAACAGaactggcgcgaagattcgtatttaaaaccggtgtggtaaagtttgcgtagccgggagggaacctgttcaacaattcgttgtttttgtcgttctgtcagcccagcgtctaatcgctttatagcatagcgttgattagacgaacgtttaataaaacgagatagcgtggtgatggttgaaaggggaacccggctttctgcaaccaggaagtcttcaccgttatgaccgataatgatcccgacgtaattactcaagaaatttgaagcagctg  >  1:88275‑M1/1‑7 (MQ=255)                                                                                                                                                                                                                tgAACAGaactggcgcgaagattcgtatttaaaaccggtgtggtaaagtttgcgtagc                                                                                                                                                                                                                           <  1:119993‑M1/58‑52 (MQ=255)                                                                                                                                                                                                                  aaCAGGTTCCCTCCCGGCTACGCAAACTTTACCacac                                                                                                                                                                                                                                              <  1:258198/37‑1 (MQ=255)                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                                             TCAAATATCAGCTGCATCAAATTGCTGGAGTAATCACGTCGGGATCATTATCGGTCATAACGGTGAAGACTTCCTGGTTGCAGAAAGCCGGGTTCCCCTTTCAACCATCACCACGCTATCTCGTTTTATTAAACGTTCGTCTAATCAACGCTATGCTATAAAGCGATTAGACGCTGGGCTGACAGAACGACAAAAACAACGAATTGTTGAACAGGTTCCCTCCCGGCTACGCAAACTTTACCACACCGGTTTTAAATACGAATCTTCGCGCCAGTTCTGTTCAAAATTTGTTTTTGATATTTATAAAGAAGCGCTATGTATTCCGGTGGGTGAAATAGAGACGTTTGGAGAATTGTTAAATAGCAATCCGAATGCAAAACTCACTTTCTGGAAATTCTGGTTCCTGGGTTCTATTCCGTGGGAGCGTAAAACCGTCACGCCAGCCAGTTTGTGGCATCATCCGGGTTTGGTGTTGATTCATG  >  CP009273/1940582‑1941063

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.