New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 4603073	20 (1.160)	4 (0.250)	3/284	NT	21.2%	coding (846/1074 nt)	yjjU	putative patatin‑like family phospholipase
	?	CP009273	= 4603185	11 (0.680)					coding (958/1074 nt)	yjjU	putative patatin‑like family phospholipase

AGGCGGCAAGGCAGGGCGCTAAAACGTTGGTCGTCATTCGCACTGTGCCGTCACAAATGTACTACACGCCGCAGTGGTTCAAACGCATGGAACGCTGGCTGGGTGACAGTAGCCTGCAGCCGCTGGTCAATCTGGTGCAGCATCATGAAACCAGCTATCGTGACATTCAGCAATTTATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGAACGACCCGACATTTAACAATGAGGATCTGGCTTGATTTGCCGTTTTATCGACAC  >  CP009273/4602808‑4603320                                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                        gggcggcAGNGCCGGGCGCTAAAACTGTGGTCGTCATTCTCACTGTGCCGTCACAAATGTACTACACGCCGCAGTGGTTCAAACGCATGGAACGCTGGCTGGGTGACAGTAGCCTGCAGCCGCTGGTCAATCTGGTGCAGCATCATGAAACCAGCTATCGTGACATTCAGCAATTTATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGaa                                                                                                                                                                                                                                                <  2:123444/274‑1 (MQ=255)                                             gtgCCGTCACAAATGTACTTCACGCCGCAGTGGTTCAAACGCATGGAACGCTGGCTGGGTGACAGTAGCCTGCAGCCGCTGGTCAATCTGGTGCAGCATCATGAAACCAGCTATCGTGACATTCAGCAATTTATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGCCTCTAAACTTGGGCGTTTATGCGGTCGTTATTCCCTCGTCAc                                                                                                                                                                                                    >  1:266586/1‑275 (MQ=255)                                                                          aagggtCANACGAATGGAACGCTGGCTGGGTGACAGTAACCTGCAGCCGATTGTCCATCTGGTGCAGCATTATGAAAACAGCGAGCGTGACATTAAGCAATTTATGGAGAAACCACTGGTCAAGCTGCGGATATTTGAAATTTATCCGCCGAATCCATTACCTAGTATCGCGCTTTGCAGTCGGATTCCTGCGCTGCGTGAAGACTAGAAACTTGGGGGTGTAGGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAgcg                                                                                                                                                                        <  2:122973/269‑1 (MQ=255)                                                                                                        ggaaaGTTGCTTGAAGCCGCTGGTCAATCTGGTGCAGCATACTGAAACCAGCTATCGTGATATTCAGCAATTTATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAgtggt                                                                                                                                           <  2:282204/269‑1 (MQ=255)                                                                                                                     cAGCCGCTGGTAAATCTGGTGCAGCATCGTGAAACCAGCTATCGTGACATTCAGCAATTTATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCNGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGACAACTGGAGCCAGTGGTAAccggtctcttat                                                                                                                             >  1:258261/1‑263 (MQ=255)                                                                                                                           cTGGTCAATCTGGCGCAGCATCATGAAACCAGCTATCGTGACATTCAGCAATTTATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGAGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGGTTATGCGGTCGTTATTTCCTCGCAACGGTTGGAAAGCTATTAACTGAAAAAGCGCAGCTTACCCGCAATCTGATGCCATTGGTGACGCCGGAATCGATGGTCAt                                                                                                                      >  1:213589/1‑275 (MQ=255)                                                                                                                             ggTCAATCTGGTGCAGCATCATGAAACCAGCTATCGTGACATTCAGCAATTTATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCg                                                                                                                                                                                                                                                    >  1:248776/1‑147 (MQ=255)                                                                                                                                 aaTCTGGTGCAGCATCATGAAACCAGCTATCGTGACATTCAGCAATTTATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGaa                                                                                                                                                                                                                                                <  2:248768/147‑1 (MQ=255)                                                                                                                                  aTCTGGTGCAGCATCATGAAACCAGCTATCGTGACATTCAGCAATTTATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTcc                                                                                                                                                                                                           >  1:271207/1‑183 (MQ=255)                                                                                                                                      ggTGCAGCATCATGAAACCAGCTATCGTGACATTCAGCAATTTATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGc                                                                                                                                                                                                       <  2:271196/183‑1 (MQ=255)                                                                                                                                                                     aTTCAGCAATTTATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTCGCAGTCGGATTCCGGCGtcaccactggcaccagatggcgggtaagcggcgctttttcagttaatagcttgccaaccgtggcgaggaaataacgaccgcataaacgcccaagttta                                                                                                                                                       >  1:24814‑M1/1‑102 (MQ=255)                                                                                                                                                                         aacatgttattgagAAACCACCGGGCAAGCTGGGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGtcaccactggcaccagatggcgggtaagcggcgctttttcagttaatagcttgccaaccgtggcgaggaaataacgaccgcataaacgcccaagtttatagt                                                                                                                                                   <  2:24814‑M1/194‑103 (MQ=255)                                                                                                                                                                                            accGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTa                                                                                                                                                                                                                           >  2:109427/1‑109 (MQ=255)                                                                                                                                                                                                ggCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCg                                                                                                                                                                                                                       <  1:109429/109‑1 (MQ=255)                                                                                                                                                                                                                        tATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGtcaccactggcaccagatggcgggtaagcggcgctttttcagttaatagcttgccaaccgtggcgaggaaataacgaccgcataaacgcccaagttta                                                                                                                                                       >  1:333617‑M1/1‑51 (MQ=255)                                                                                                                                                                                                                            cgccgAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGtcaccactggcaccagatggcgggtaagcggcgctttttcagttaatagcttgccaaccgtggcgaggaaataacgaccgcataaacgcccaagtttatagt                                                                                                                                                   <  2:333605‑M1/149‑103 (MQ=255)                                                                                                                                                                                                                             gccgAAGCCATTACATAGTATTGACCTTGCCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGt                                                                                                                                                                                                 >  1:231224/1‑102 (MQ=255)                                                                                                                                                                                                                                 aaGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGc                                                                                                                                                                                             <  2:231217/102‑1 (MQ=255)                                                                                                                                                                                                                                               tATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGATTACCCGCCCTCTGGTGCCAGTGGTGCCGCCGGAATCGCTTGTCATTCCTCCTGCGCCAGTCGCCAACGCTACGCTGGTTGCCGACGTGATCGACGCCCCGCCGGCCAACGACCCCCCATTTAACACTGCGGACCTGGCCTGCTTTGCCgctgttacgcccc  >  2:138015/1‑263 (MQ=255)                                                                                                                                                                                                                                               tATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTCAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGcc                                                                                                                                                           >  1:216937/1‑122 (MQ=255)                                                                                                                                                                                                                                                 tCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGcgccgc                                                                                                                                                                    >  1:151287/1‑111 (MQ=255)                                                                                                                                                                                                                                                 tCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCa                                                             >  1:275250/1‑214 (MQ=255)                                                                                                                                                                                                                                                   gcgcTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCt                                                                                                                                                       <  2:216931/122‑1 (MQ=255)                                                                                                                                                                                                                                                     gcTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTAc                                                                                                                                                                <  2:151283/111‑1 (MQ=255)                                                                                                                                                                                                                                                     gcTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCg                                                         <  2:275239/214‑1 (MQ=255)                                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                        AGGCGGCAAGGCAGGGCGCTAAAACGTTGGTCGTCATTCGCACTGTGCCGTCACAAATGTACTACACGCCGCAGTGGTTCAAACGCATGGAACGCTGGCTGGGTGACAGTAGCCTGCAGCCGCTGGTCAATCTGGTGCAGCATCATGAAACCAGCTATCGTGACATTCAGCAATTTATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGAACGACCCGACATTTAACAATGAGGATCTGGCTTGATTTGCCGTTTTATCGACAC  >  CP009273/4602808‑4603320

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.