New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 832107	7 (0.400)	7 (0.430)	6/284	NT	37.3%	coding (301/1086 nt)	ybiC	putative dehydrogenase
	?	CP009273	= 832353	17 (1.050)					coding (547/1086 nt)	ybiC	putative dehydrogenase

AAGCGCATCAGCACGGTATTGCCGCCGTGGCGCTACATAACTCGCATCATATCGGCCGTATCGGTTACTGGGCGGAGCAGTGTGCAGCGGCGGGGTTTGTCTCTATCCACTTTGTTAGCGTGGTCGGTATTCCAATGGTCGCGCCGTTCCACGGTCGCGACAGCCGCTTTGGCACCAATCCGTTCTGTGTGGTTTTCCCTCGTAAAGATAATTTCCCGCTGTTGCTTGATTACGCCACCAGCGCCATTGCATTTGGCAAAACCCGCGTCGCCTGGCATAAAGGCGTCCCCGTGCCGCCAGGTTGCCTGATTGACGTTAACGGCGTGCCGACGACCAATCCGGCGGTAATGCAGGAGTCGCCGTTGGGTTCGCTGTTGACCTTTGCCGAACATAAAGGCTACGCCCTTGCAGCGATGTGTGAAATTCTTGGCGGGGCGCTTTCCGGCGGTAAAACGACGCATCAGGAAACGTTACAAACCAGTCCCGATGCCATTCTTAACTGCATGACCA  >  CP009273/832117‑832626                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                                                  aaGCGCATCAGCACGGTATTGCCGCCGTGGCGCGACATAACTCGCATCATATCGGCCGTATCGGTTACTGGGCGGAGCAGTGTGCAGCGGCGGGGTTTGTCTCTATCCACTTTGTTAGCGTGGGCGGTATTCCAATGGTCGCGCCGTTCCACGGTCGCCACACCCGCTTTGGCACCCATCCGTTCTGTGTGCTTTTCCCTCGTAACGATAAATTCCCGCTTGTTCTTGATTACGCCCcccgcgccctcgcctcatgtgccggggccgtacccct                                                                                                                                                                                                                                              <  2:294301‑M2/274‑38 (MQ=255)   gcgcATCAGCACGGTATTGCCGCCGTGGCGCTACATAACTCGCATCATATCGGCCGTATCGGTTACTGGGCGGAGCAGTGTGCAGCGGCGGGGTTTGTCTCTATCCACTTTGTTAGCGTGGTCGGTATTCCAATGGTCGCGCCGTTCCACGGTCGCGCCAGCCGCTTTGGCACCAATCCGTTCTGTGTGGTTTTCCCTCTTAAAGATAATTTCCCGCTGTTGCTTGATTACGCCAccagcgccatcgcttcatgttccgcgaactgaccaaacgc                                                                                                                                                                                                                                           <  1:107114‑M2/275‑41 (MQ=255)   gcgcATCAGCACGGTATTGCCGCCGTGGCGCTACATAACTCGCATCATATCGGCCGTATCGGTTACTGGGCGGAGCAGTGTGCAGCGGCGGGGTTTGTCTCTATCCACTTTGTTAGCGTGGTCGGTATTCCAATGGTCGCGCCGCTCCACGGTCGCGACAGCCGCTTTGGCACCACTCCGTTCTGTGTGGTTTTCCCTCGTCACGAGAATTTCCCGCTGTTGCTTGCTTACGCCAccagcgcccgcgcgccatgtgccgccacctgccccacttc                                                                                                                                                                                                                                           <  2:334326‑M2/275‑41 (MQ=255)                           gTGGCGCTACATAACTCGCGTCATATCGGCCGTATCGGTTACTGGGCGGAGCAGTGTGCAGCGGCGGGGTTTGTCTCTATCCACTTTGTTAGCGTGGTCGGTATTCCAATGGTCGCGCCGTTCCACGGTCGCGACAGCCGCTTTGGCACCAATCCGTTCTGTGTGGTTTTCCCTCGTAAAGATAATTTCCCGCTGTTGCTTGATTACGCCACCAGCGCCATTGCATTTGGCAAAAcc                                                                                                                                                                                                                                                         >  1:267859/1‑237 (MQ=255)                               cgcTACATAACTCGCATCATATCGGCCGTATCGGTTACTGGGCGGAGCAGTGTGCAGCGGCGGGGTTTGTCTCTATCCACTTTGTTAGCGTGGTCGGTATTCCAATGGTCGCGCCGTTCCACGGTCGCGACAGCCGCTTTGGCACCAATCCGTTCTGTGTGGTTTTCCCTCGTAAAGATAATTTCCCGCTGTTGCTTGATTACGCCACCAGCGCCATTGCATTTGGCAAAACCCGCGTCGcc                                                                                                                                                                                                                                                <  1:136645/242‑1 (MQ=255)                                     aTAACGCGCATCATTTCGGCCGTATCGGTTACTGGGCGGAGCAGTGTGCAGCGGCGGGGTTTGTCTCTATCCACTTTGTTAGCGTGGTCGGTATTCCAATGGTCGCGCCGTTCCACGGTCGTGACAGTCGCTTTGGCACCAATCCGTTCTGTGTGGTTTTCCCTCGTAAAGATAATTTCCCGCTGTTGCTTGATTACGCCAccagcgccatcgcttcatgtgccgcgacctgaccaaatgcgcgatcgccatcgagcgtgaccgccgcccccgc                                                                                                                                                                                                          >  1:294312‑M2/1‑201 (MQ=255)                                                                                               gTTTGTCTCTATCCACTTTGTTAGCGTGGTCGGTATTCCAATGNTCGCGCCGTTCCACGGTCGCGACAGCCGCTTTGGCACCAATCCGTTCTGTGTGGTTTTCCCTCGTAAAGATAATTTCCCGCTGTTGCTTGATTACGCCACCAGCGCCATTGCATTTGGCAAAACCCGCGTCGCCTGGCATAAAGGCGTCCCCGTGCCGCCAGGTTGCCTGATTGACGTTAACg                                                                                                                                                                                               <  1:258796/227‑1 (MQ=255)                                                                                                                ttGTTTGCGTGGTCGGTATTCCATTGGTCGCGCCGTTCCACGGTCGCGACAGCCGCTTTGGCACCAATCCGTTCTGTGTGGTTTTCCCTCGTAAAGATAATTTCCCGCTGTTGCTTGATTACGCCCCCAGCGCCATTGCATTTGGCAAAACCCGCGTCGCCTGGCATAAAGGCGTCCCCGTGCCGCCAGGTTGCCTGATTGACGTTAACGGCGTGCCGACGACCAATCCGGCGGTAATGCAGGAGTCGCCGTTGGGTTCGCTGTTGACCTTTGcc                                                                                                                              <  1:277040/275‑1 (MQ=255)                                                                                                                         tGGTCGGTATTCCAATGGTCGCGCCGTTCCACGGTCGCGACAGCCGCTTTGGCACCAATCCGTTCTGTGTGGTTTTCCCTCGTAAAGATAATTTCCCGCTGTTGCTTGATTACGCCAccagcgccatcgcttcatgtgccgcgacctgaccaaatgcgcgatcgcc                                                                                                                                                                                                                                  <  2:126379‑M2/166‑50 (MQ=255)                                                                                                                             cGGTATTCCAATGGTCGCGCCGTTCCACGGTCGCGACAGCCGCTTTGGCACCAATCCGTTCTGTGTGGTTTTCCCTCGTAAAGATAATTTCCCGCTGTTGCTTGATTACGCCAccagcgccatcgcttcatgtgccgcgacctgaccaaatgcgcgatcgccatcg                                                                                                                                                                                                                              >  1:126381‑M2/1‑113 (MQ=255)                                                                                                                                                             gcgACAGCCGCTTTGGCACCAATCCGTTCTGTGTGGTTTTCCCTCGTAAAGATAATTTCCCGCTGTTGCTTGATTACGCCACCAGCGCCATTGCATTTGGCAAAAcc                                                                                                                                                                                                                                                         >  2:47091/1‑107 (MQ=255)                                                                                                                                                                 cAGCCGCTTTGGCACCAATCCGTTCTGTGTGGTTTTCCCTCGTAAAGATAATTTCCCGCTGTTGCTTGATTACGCCACCAGCGCCATTGCATTTGGCAAAACCcgcg                                                                                                                                                                                                                                                     <  1:47092/107‑1 (MQ=255)                                                                                                                                                                                  aTCCGTTCTGTGTGGTTTTCCCTCGTAAAGATAATTTCCCGCTGTTGCTTGATTACGCCACCAGCGCCATTGCATTTGGCAAAAcc                                                                                                                                                                                                                                                         >  2:322742/1‑86 (MQ=255)                                                                                                                                                                                      gTTCTGTGTGGTTTTCCCTCGTAAAGATAATTTCCCGCTGTTGCTTGATTACGCCACCAGCGCCATTGCATTTGGCAAAACCcgcg                                                                                                                                                                                                                                                     <  1:322754/86‑1 (MQ=255)                                                                                                                                                                                       ttCTGTGTGGTTTTCCCTCGTAGAGATAATTTCCCGCTGTTGCTTGATTACGCCACCAGCGCCATTGCATTTGGCAAAACCCGCGTCGCCTGGCATAAAGGCGTCCCCGTgccgcc                                                                                                                                                                                                                      >  2:186520/1‑116 (MQ=255)                                                                                                                                                                                       ttCTGTGTGGTTTTCCCTCGTAAAGATAATTTCCCGCTGTTGCTTGATTACGCCACCAGCGCCATTGCATTTGGCAAAACCCGCGTCGCCTGGCATAAAGGCGTCCCCGTGCCGCCAGGTTGCCTGATTGACGTTAACGTCGTGCCGACGACNAATCCGGCGGTAATGCAGGAGTCGCCGTTg                                                                                                                                                   >  1:277863/1‑183 (MQ=255)                                                                                                                                                                                           gtgtgGTTTTCCCTCGTAAAGATAATTTCCCGCTGTTGCTTGATTACGCCACCAGCGCCATTGCATTTGGCAAAACCCGCGTCGCCTGGCATAAAGGCGTCCCCGTGCCGCCAGGt                                                                                                                                                                                                                  <  1:186524/116‑1 (MQ=255)                                                                                                                                                                                                      ccTCGTAAAGATAATTTCCCGCTGTTGCTTGATTACGCCACCAGCGCCATTGCATTTGGCAAAACCCGCGTCGCCTGGCATAAAGGCGTCCCCGTGCCGCCAgg                                                                                                                                                                                                                   >  2:153267/1‑104 (MQ=255)                                                                                                                                                                                                          gTAAAGATAATTTCCCGCTGTTGCTTGATTACGCCACCAGCGCCATTGCATTTGGCAAAACCCGCGTCGCCTGGCATAAAGGCGTCCCCGTGCCGCCAGGTTGc                                                                                                                                                                                                               <  1:153271/104‑1 (MQ=255)                                                                                                                                                                                                                    tttCCCGCTGTTGCTTGATTACGCCACCAGCGCCATTGCATTTGGCAAAACCCGCGTCGCCTGGCATAAAGGCGTc                                                                                                                                                                                                                                 >  1:277963/1‑76 (MQ=255)                                                                                                                                                                                                                        ccGCTGTTGCTTGATTACGCCACCAGCGCCATTGCATTTGGCAAAACCCGCGTCGCCTGGCATAAAGGCGTCCCCg                                                                                                                                                                                                                             <  2:277952/76‑1 (MQ=255)                                                                                                                                                                                                                          gCTGTTGCTTGATTACGCCACCAGCGCCATTGCATTTGGCAAAACCCGCGTCGCCTGGCATAGAGGCGTCCCCGTGCCGCCAGGTTTCCTGATTGACGTTAACGGCGTGCCGACGACCAATCCGGCGGTAATGCTGGAGTCGCCGTTGGGTTCGCTTCTGACCTTTGCCGCACCTACAGGCTACGCCCTTGCAGCGATGTGGTACTTTCTTGGCGGTTGTCTTTCCGGCGGTAAACCGAAGCCGCCGGAAACTTTACAAACCAGTCCCgtggcc                     >  2:81788/1‑269 (MQ=255)                                                                                                                                                                                                                              ttGCTTGATTACGCCACCTGCGCCATTGCATTTGGCAAAACCCGCGTCGCCTGGCATAAAGGCGTCCCCGTGCCGCCAGGTTGCCTGATTTACGTTAACGGCGTGCCGACGACCAATCCGGCGGTAATGCAGGAGTCGCCGTTGGGTTCGCTGTTGACCTTTGCCGAACATAAAGGCTACGCCCTTGCAGCGATGTGTGAAATTCTTGGCGGGGCGCTTTCCGGCGGTAAAACGACGCATCAGGAAACGTTACAAACCAGTCCCGATg                       <  1:173821/268‑1 (MQ=255)                                                                                                                                                                                                                                     aTTACGCCAccagcgccatcgcttcatgtgccgcgacctgaccaaatgcgcgatcgccatcgagcgtgaccgccgcccccgcctctttaacggttttggcatgatggttaatttgcaggtgcccctgactccaggagcgtacatagcttgggatcatgccaataccatgtgaatcatgccctgccaggtttgccgcgattaaatgatcggcaactaatttcgcttcttgttcctcgctacccatctgacgaaatacagcctgaataaaactgtgc         >  1:334338‑M2/1‑9 (MQ=255)                                                                                                                                                                                                                                             accaGCGCCATTGCATTTGGCAAAACCCGCGTCGCCTGGCATAAAGGCGTCCCCGTGCCGCCAGGTTGCCTGATTGACGTTAACGGCGTGCCGACGACCAATCCGGCGGTAATGCAGGAGTCGCCGTTGGGTTCGCTGTTGACCTTTGCCGAACATAAAGGCTACGCCCTTGCAGCGATGTGTGAAATTCTTGGCGGGGCGCTTTCCGGCGGTAAAACGACGCATCAGGAAACGTTACAAACCAGTCCCGATGCCATTCTTAACTGCATGACCa  <  1:81790/274‑1 (MQ=255)                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                                                  AAGCGCATCAGCACGGTATTGCCGCCGTGGCGCTACATAACTCGCATCATATCGGCCGTATCGGTTACTGGGCGGAGCAGTGTGCAGCGGCGGGGTTTGTCTCTATCCACTTTGTTAGCGTGGTCGGTATTCCAATGGTCGCGCCGTTCCACGGTCGCGACAGCCGCTTTGGCACCAATCCGTTCTGTGTGGTTTTCCCTCGTAAAGATAATTTCCCGCTGTTGCTTGATTACGCCACCAGCGCCATTGCATTTGGCAAAACCCGCGTCGCCTGGCATAAAGGCGTCCCCGTGCCGCCAGGTTGCCTGATTGACGTTAACGGCGTGCCGACGACCAATCCGGCGGTAATGCAGGAGTCGCCGTTGGGTTCGCTGTTGACCTTTGCCGAACATAAAGGCTACGCCCTTGCAGCGATGTGTGAAATTCTTGGCGGGGCGCTTTCCGGCGGTAAAACGACGCATCAGGAAACGTTACAAACCAGTCCCGATGCCATTCTTAACTGCATGACCA  >  CP009273/832117‑832626

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.