New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 3615324	NA (NA)	5 (0.310)	4/286	NT	100%	coding (2773/4236 nt)	rhsB	Rhs family putative polymorphic toxin, putative neighboring cell growth inhibitor
	?	CP009273	= 3615424	0 (0.000)					coding (2873/4236 nt)	rhsB	Rhs family putative polymorphic toxin, putative neighboring cell growth inhibitor

TGACGCGCACTATCTTTACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGGACTCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAG  >  CP009273/3615344‑3615550                                                                                 |                                                                                                                               tGACGCGCACTATCTTTACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGgccacatgctgagggtgctgtccgggtgcagctccgggtc                                                                                        <  1:56712‑M2/121‑41 (MQ=255)     gcgcACTATCTTTACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGgccacatgctgagggtgctgtccgggtgcagctccgggtcgggc                                                                                    >  2:56710‑M2/1‑77 (MQ=255)                                             cAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGgccacatgctgagggtgctgtccgggtgcagctccgggtcgggcaggcggttacctgccgggtctgtggcatac                                                      <  1:161814‑M2/111‑75 (MQ=255)                                             cAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGgccacatgctgagg                                                                                                                  <  1:2534‑M2/51‑15 (MQ=255)                                                 gaAAACCGACCTCATCCCGGAAGGGGTTATCCGgccacatgctgagggtgc                                                                                                              >  2:2534‑M2/1‑33 (MQ=255)                                                                         ggTTATCCGgccacatgctgagggtgctgtccgggtgcagctccgggtcgggcaggcggttacctgccgggtctgtggcatacgggatgcggatatccagattcgctgcggtggtgtgaacgccggtcagcctgc  >  1:218764‑M2/1‑9 (MQ=255)                                                                           ttATCCGgccacatgctgagggtgctgtccgggtgcagctccgggtcgggcaggcggttacctgccgggtctgtggcatacgggat                                                 <  1:174748‑M2/86‑80 (MQ=255)                                                                              tCCGgccacatgctgagggtgctgtccgggtgcagctccgggtcgggcaggcggttacctgccgggtctgtggcatacgggatgcggatatcca                                      <  1:318827‑M2/94‑91 (MQ=255)                                                                               ccGgccacatgctgagggtgctgtccgggtgcagctccgggtcgggcaggcggttacctgccgggtctgtggcatacgggatgcgg                                             >  2:174744‑M2/1‑3 (MQ=255)                                                                                 |                                                                                                                               TGACGCGCACTATCTTTACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGGACTCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAG  >  CP009273/3615344‑3615550

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.